test_suite.yml

name: Test suite

on:
  # Trigger the CI whenever a commit is pushed to main or develop, i.e., a PR is merged
  push:
    branches: [main, develop]

  # Trigger the CI whenever a commit is pushed to an open PR
  pull_request:

env:
  # Environment variables for GISS modelE
  GISS_HOME: /__w/GISS-GC/GISS-GC
  ModelE_Support: /__w/GISS-GC/GISS-GC/run
  DATA: /__w/GISS-GC/GISS-GC/run/prod_input_files
  # Environment variables for compiler
  CC: gcc
  CXX: g++
  FC: gfortran
  F90: gfortran
  F77: gfortran
  # Misc. environment variables
  F_UFMTENDIAN: big
  KMP_STACKSIZE: 100000000
  OMP_NUM_THREADS: 36

jobs:
  # Test that GISS-GC can be compiled without error
  compile:
    runs-on: ubuntu-22.04
    container:
      image: ghcr.io/fetch4/giss-gc-dev-env:latest
      credentials:
        username: ${{ github.actor }}
        password: ${{ secrets.github_token }}

    steps:
    - uses: actions/checkout@v2

    - name: Setup submodules
      run: |
        git config --global --add safe.directory ${GISS_HOME}
        git submodule init
        git submodule update

    - name: Create fake inputs
      run: |
        # Make run directories
        mkdir -p ${DATA}
        mkdir -p ${ModelE_Support}/exec
        mkdir -p ${ModelE_Support}/huge_space
        mkdir -p ${ModelE_Support}/prod_decks
        mkdir -p ${ModelE_Support}/prod_runs
        # Fake input files
        touch ${DATA}/CD144X90.ext.nc
        touch ${DATA}/cloud.epsilon4.72x46
        touch ${DATA}/CO2profile.Jul16-2017.txt
        touch ${DATA}/CROPS_and_pastures_Pongratz_to_Hurtt_144X90N_nocasp.nc
        touch ${DATA}/dH2O_by_CH4_monthly
        touch ${DATA}/GHG.CMIP6.1-2014.txt
        touch ${DATA}/GIC.144X90.DEC01.1.ext_1.nc
        touch ${DATA}/GLMELT_144X90_gas.OCN.nc
        touch ${DATA}/H2Ocont_MT_CKD
        touch ${DATA}/Irrig144x90_1848to2100_FixedFuture_v3.nc
        touch ${DATA}/ISCCP.tautables
        touch ${DATA}/LWCorrTables33k
        touch ${DATA}/LWTables33k_lowH2O_CO2_O3_planck_1-800
        touch ${DATA}/miescatpar.abcdv2
        touch ${DATA}/MSU_SSU_RSS_weights.txt
        touch ${DATA}/NCARIC.144x90.D7712010_ext.nc
        touch ${DATA}/o3_2010_shindell_144x90x49_April1850.nc
        touch ${DATA}/oct2003.relhum.nr.Q633G633.table
        touch ${DATA}/OST_144x90.1876-1885avg.CMIP6.nc
        touch ${DATA}/RD_Fd.nc
        touch ${DATA}/RD_Fd.names.txt
        touch ${DATA}/REG2X2.5
        touch ${DATA}/S144X900098M.ext.nc
        touch ${DATA}/sgpgxg.table8
        touch ${DATA}/SICE_144x90.1876-1885avg.CMIP6.nc
        touch ${DATA}/soil_textures_top30cm_2x2.5
        touch ${DATA}/soilcarb_top30cm_2x2.5.nc
        touch ${DATA}/solar.CMIP6official.ann1850-2299_with_E3_fastJ.nc
        touch ${DATA}/STRATAER.VOL.1850-2014_CMIP6_hdr
        touch ${DATA}/top_index_144x90_a.ij.ext.nc
        touch ${DATA}/topcld.trscat8
        touch ${DATA}/V144x90_EntMM16_height_trimmed_scaled_ext.nc
        touch ${DATA}/V144x90_EntMM16_lai_max_trimmed_scaled_ext.nc
        touch ${DATA}/V144x90_EntMM16_lai_trimmed_scaled_ext.nc
        touch ${DATA}/V144x90_EntMM16_lc_max_trimmed_scaled_nocrops.ext.nc
        touch ${DATA}/Z2HX2fromZ1QX1N.BS1.nc
        touch ${DATA}/ZSIfac_144x90.1876-1885avg.CMIP6.nc
        touch ${DATA}/ZVAR2X25A.nc
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCA
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCB
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCdalbsn
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/DUST
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/NIT
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/O3
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/OCA
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/SSA
        mkdir -p ${DATA}/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/SUL
        mkdir -p ${DATA}/nudging/merra2
        touch ${DATA}/nudging/merra2/uwnd.2014.MERRA2onGISSE2.nc4
        touch ${DATA}/nudging/merra2/vwnd.2014.MERRA2onGISSE2.nc4
        touch ${DATA}/nudging/merra2/uwnd.2015.MERRA2onGISSE2.nc4
        touch ${DATA}/nudging/merra2/vwnd.2015.MERRA2onGISSE2.nc4
        touch ${DATA}/nudging/merra2/uwnd.2016.MERRA2onGISSE2.nc4
        touch ${DATA}/nudging/merra2/vwnd.2016.MERRA2onGISSE2.nc4

    - name: Build GISS-GC with GISS_GC_14 rundeck
      run: |
        . /opt/spack-environment/activate.sh
        export RUNID=GISS_GC_14
        # Environment variables for passing NetCDF-C paths to GEOS-Chem
        export NETCDF_HOME=$(nc-config --prefix)
        export GC_BIN=${NETCDF_HOME}/bin
        export GC_INCLUDE=${NETCDF_HOME}/include
        export GC_LIB=${NETCDF_HOME}/lib
        # Environment variables for passing NetCDF-Fortran paths to GEOS-Chem
        export NETCDF_F_HOME=$(nf-config --prefix)
        export GC_F_BIN=${NETCDF_F_HOME}/bin
        export GC_F_INCLUDE=${NETCDF_F_HOME}/include
        export GC_F_LIB=${NETCDF_F_HOME}/lib
        # Environment variable for OpenMPI build
        export MPI_ROOT=/opt/software/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.6-s3fu5gvaasgjy4jecnb6rvemx7oofexx
        # Copy over rundeck and modelErc
        cp .github/rundecks/${RUNID}.R decks
        cp .github/modelErc ~/.modelErc
        # Build the model
        cd decks
        make -j setup RUN=${RUNID} F90=mpif90 GC=YES