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test_suite.yml
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name: Test suite
on:
# Trigger the CI whenever a commit is pushed to main or develop, i.e., a PR is merged
push:
branches: [main, develop]
# Trigger the CI whenever a commit is pushed to an open PR
pull_request:
jobs:
# Test that GISS-GC can be compiled without error
compile:
runs-on: ubuntu-22.04
container:
image: ghcr.io/fetch4/giss-gc-dev-env:latest
credentials:
username: ${{ github.actor }}
password: ${{ secrets.github_token }}
steps:
- uses: actions/checkout@v2
- name: Build GISS-GC with GISS_GC_14 rundeck
run: |
. /opt/spack-environment/activate.sh
# Environment variables for compiler
export CC=gcc
export CXX=g++
export FC=gfortran
export F90=gfortran
export F77=gfortran
# Environment variables for GISS-GC
export GISS_HOME=/__w/GISS-GC/GISS-GC
export RUNID=GISS_GC_14
export ModelE_Support=${GISS_HOME}/run
mkdir -p ${ModelE_Support}
# Environment variables for passing NetCDF-C paths to GEOS-Chem
export NETCDF_HOME=$(nc-config --prefix)
export GC_BIN=${NETCDF_HOME}/bin
export GC_INCLUDE=${NETCDF_HOME}/include
export GC_LIB=${NETCDF_HOME}/lib
# Environment variables for passing NetCDF-Fortran paths to GEOS-Chem
export NETCDF_F_HOME=$(nf-config --prefix)
export GC_F_BIN=${NETCDF_F_HOME}/bin
export GC_F_INCLUDE=${NETCDF_F_HOME}/include
export GC_F_LIB=${NETCDF_F_HOME}/lib
# Environment variable for OpenMPI build
export MPI_ROOT=/opt/software/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.6-s3fu5gvaasgjy4jecnb6rvemx7oofexx/
# Misc settings
export F_UFMTENDIAN=big
export KMP_STACKSIZE=100000000
export OMP_NUM_THREADS=36
# Copy over rundeck and modelErc
cp .github/rundecks/GISS_GC_14.R decks/
cp .github/modelErc ~/.modelErc
# Make run directories
mkdir -p ${ModelE_Support}/exec
mkdir -p ${ModelE_Support}/huge_space
mkdir -p ${ModelE_Support}/prod_decks
mkdir -p ${ModelE_Support}/prod_input_files
mkdir -p ${ModelE_Support}/prod_runs
# Fake input files
touch ${ModelE_Support}/run/prod_input_files/CD144X90.ext.nc
touch ${ModelE_Support}/run/prod_input_files/cloud.epsilon4.72x46
touch ${ModelE_Support}/run/prod_input_files/CO2profile.Jul16-2017.txt
touch ${ModelE_Support}/run/prod_input_files/CROPS_and_pastures_Pongratz_to_Hurtt_144X90N_nocasp.nc
touch ${ModelE_Support}/run/prod_input_files/dH2O_by_CH4_monthly
touch ${ModelE_Support}/run/prod_input_files/GHG.CMIP6.1-2014.txt
touch ${ModelE_Support}/run/prod_input_files/GIC.144X90.DEC01.1.ext_1.nc
touch ${ModelE_Support}/run/prod_input_files/GLMELT_144X90_gas.OCN.nc
touch ${ModelE_Support}/run/prod_input_files/H2Ocont_MT_CKD
touch ${ModelE_Support}/run/prod_input_files/Irrig144x90_1848to2100_FixedFuture_v3.nc
touch ${ModelE_Support}/run/prod_input_files/ISCCP.tautables
touch ${ModelE_Support}/run/prod_input_files/LWCorrTables33k
touch ${ModelE_Support}/run/prod_input_files/LWTables33k_lowH2O_CO2_O3_planck_1-800
touch ${ModelE_Support}/run/prod_input_files/miescatpar.abcdv2
touch ${ModelE_Support}/run/prod_input_files/MSU_SSU_RSS_weights.txt
touch ${ModelE_Support}/run/prod_input_files/NCARIC.144x90.D7712010_ext.nc
touch ${ModelE_Support}/run/prod_input_files/o3_2010_shindell_144x90x49_April1850.nc
touch ${ModelE_Support}/run/prod_input_files/oct2003.relhum.nr.Q633G633.table
touch ${ModelE_Support}/run/prod_input_files/OST_144x90.1876-1885avg.CMIP6.nc
touch ${ModelE_Support}/run/prod_input_files/RD_Fd.nc
touch ${ModelE_Support}/run/prod_input_files/RD_Fd.names.txt
touch ${ModelE_Support}/run/prod_input_files/REG2X2.5
touch ${ModelE_Support}/run/prod_input_files/S144X900098M.ext.nc
touch ${ModelE_Support}/run/prod_input_files/sgpgxg.table8
touch ${ModelE_Support}/run/prod_input_files/SICE_144x90.1876-1885avg.CMIP6.nc
touch ${ModelE_Support}/run/prod_input_files/soil_textures_top30cm_2x2.5
touch ${ModelE_Support}/run/prod_input_files/soilcarb_top30cm_2x2.5.nc
touch ${ModelE_Support}/run/prod_input_files/solar.CMIP6official.ann1850-2299_with_E3_fastJ.nc
touch ${ModelE_Support}/run/prod_input_files/STRATAER.VOL.1850-2014_CMIP6_hdr
touch ${ModelE_Support}/run/prod_input_files/top_index_144x90_a.ij.ext.nc
touch ${ModelE_Support}/run/prod_input_files/topcld.trscat8
touch ${ModelE_Support}/run/prod_input_files/V144x90_EntMM16_height_trimmed_scaled_ext.nc
touch ${ModelE_Support}/run/prod_input_files/V144x90_EntMM16_lai_max_trimmed_scaled_ext.nc
touch ${ModelE_Support}/run/prod_input_files/V144x90_EntMM16_lai_trimmed_scaled_ext.nc
touch ${ModelE_Support}/run/prod_input_files/V144x90_EntMM16_lc_max_trimmed_scaled_nocrops.ext.nc
touch ${ModelE_Support}/run/prod_input_files/Z2HX2fromZ1QX1N.BS1.nc
touch ${ModelE_Support}/run/prod_input_files/ZSIfac_144x90.1876-1885avg.CMIP6.nc
touch ${ModelE_Support}/run/prod_input_files/ZVAR2X25A.nc
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCA
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCB
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/BCdalbsn
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/DUST
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/NIT
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/O3
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/OCA
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/SSA
mkdir -p ${ModelE_Support}/prod_input_files/cmip6_nint_inputs_E14TomaOCNf10_4av_decadal/SUL
mkdir -p ${ModelE_Support}/prod_input_files/nudging/merra2/
touch ${ModelE_Support}/prod_input_files/nudging/merra2/uwnd.2014.MERRA2onGISSE2.nc4
touch ${ModelE_Support}/prod_input_files/nudging/merra2/vwnd.2014.MERRA2onGISSE2.nc4
touch ${ModelE_Support}/prod_input_files/nudging/merra2/uwnd.2015.MERRA2onGISSE2.nc4
touch ${ModelE_Support}/prod_input_files/nudging/merra2/vwnd.2015.MERRA2onGISSE2.nc4
touch ${ModelE_Support}/prod_input_files/nudging/merra2/uwnd.2016.MERRA2onGISSE2.nc4
touch ${ModelE_Support}/prod_input_files/nudging/merra2/vwnd.2016.MERRA2onGISSE2.nc4
# Setup submodules
git config --global --add safe.directory ${GISS_HOME}
git submodule init
git submodule update
# Build the model
cd decks/
make -j setup RUN=${RUNID} F90=mpif90 GC=YES