From de024b617db8a9ab25797c8feaf9328e71e2b7f0 Mon Sep 17 00:00:00 2001
From: Donald Campbell <125581724+donaldcampbelljr@users.noreply.github.com>
Date: Mon, 24 Jun 2024 12:57:22 -0400
Subject: [PATCH] update sample_yaml_paths to be accurate, add changelog for
 1.9.0

---
 docs/looper/changelog.md            | 8 ++++++++
 docs/looper/pre-submission-hooks.md | 2 +-
 2 files changed, 9 insertions(+), 1 deletion(-)

diff --git a/docs/looper/changelog.md b/docs/looper/changelog.md
index e7c18c04..e573cf8c 100644
--- a/docs/looper/changelog.md
+++ b/docs/looper/changelog.md
@@ -1,6 +1,14 @@
 # Changelog
 
 This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html) and [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) format.
+
+## [1.9.0] -- 2024-06-xx
+
+### Added
+- user can now add sample modifiers and cli modifiers to looper config instead of PEP project [#270](https://github.com/pepkit/looper/issues/270)
+- pipeline interfaces no longer must be nested under sample and project keys within looper config file [#465](https://github.com/pepkit/looper/issues/465)
+
+
 ## [1.8.1] -- 2024-06-05
 
 ### Fixed
diff --git a/docs/looper/pre-submission-hooks.md b/docs/looper/pre-submission-hooks.md
index 9cdd79d5..f5bff4e4 100644
--- a/docs/looper/pre-submission-hooks.md
+++ b/docs/looper/pre-submission-hooks.md
@@ -40,7 +40,7 @@ Saves all sample metadata as a YAML file. The output file path can be customized
 pipeline_type: sample
 var_templates:
   main: "{looper.piface_dir}/pipelines/pipeline1.py"
-  sample_yaml_path: "{looper.output_dir}/custom_sample_yamls"
+  sample_yaml_path: "{looper.output_dir}/custom_sample_yamls/{sample.sample_name}.yaml"
 pre_submit:
   python_functions:
     - looper.write_sample_yaml