pyproject.toml

# https://peps.python.org/pep-0517/
[build-system]
requires = ["setuptools>=45", "wheel", "setuptools_scm[toml]>=6.2"]
build-backend = "setuptools.build_meta"

[tool.setuptools_scm]

# https://peps.python.org/pep-0621/
[project]
name = "napari-aicsimageio"
description = "AICSImageIO bindings for napari"
keywords = [
  "aicsimageio",
  "CZI",
  "image reading",
  "imageio",
  "LIF",
  "metadata",
  "napari",
  "ND2",
  "TIFF",
]
readme = "README.md"
requires-python = ">=3.8"
license = { text = "GPLv3" }
authors = [
  { email = "evamaxfieldbrown@gmail.com", name = "Eva Maxfield Brown" },
  { email = "talley.lambert@gmail.com", name = "Talley Lambert" },
]
classifiers = [
  "Development Status :: 5 - Production/Stable",
  "Intended Audience :: Science/Research",
  "Framework :: napari",
  "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
  "Operating System :: OS Independent",
  "Programming Language :: Python :: 3",
  "Programming Language :: Python :: 3.8",
  "Programming Language :: Python :: 3.9",
  "Programming Language :: Python :: 3.10",
  "Topic :: Scientific/Engineering :: Bio-Informatics",
  "Topic :: Scientific/Engineering :: Image Processing",
  "Topic :: Scientific/Engineering :: Information Analysis",
  "Topic :: Scientific/Engineering :: Visualization",
  "Topic :: Scientific/Engineering",
]
dynamic = ["version"]
dependencies = [
  "aicsimageio[all]>=4.6.3",
  "fsspec[http]>=2022.7.1",  # version pin to support aicspylibczi
  "napari>=0.4.11",
  "psutil>=5.7.0",
  # Formats not included by default with aicsimageio
  "aicspylibczi>=3.0.5",
  "bioformats_jar",
  "readlif>=0.6.4",
]

[project.urls]
Homepage = "https://github.com/AllenCellModeling/napari-aicsimageio"
"Bug Tracker" = "https://github.com/AllenCellModeling/napari-aicsimageio/issues"
Documentation = "https://github.com/AllenCellModeling/napari-aicsimageio#README.md"
"User Support" = "https://github.com/AllenCellModeling/napari-aicsimageio/issues"

# extras
# https://peps.python.org/pep-0621/#dependencies-optional-dependencies
[project.optional-dependencies]
test = [
  "PyQt5",
  "pytest>=5.4.3",
  "pytest-qt~=4.0",
  "pytest-cov>=2.9.0",
  "pytest-raises>=0.11",
  "pytest-xvfb~=2.0",
  "quilt3~=3.4.0",
]
dev = [
  "black>=19.10b0",
  "coverage>=5.1",
  "docutils>=0.10,<0.16",
  "flake8-debugger>=3.2.1",
  "flake8-pyprojecttoml",
  "flake8>=3.8.3",
  "ipython>=7.15.0",
  "isort>=5.7.0",
  "mypy>=0.800",
  "pytest-runner>=5.2",
  "twine>=3.1.1",
  "wheel>=0.34.2",
]

# Entry points
# https://peps.python.org/pep-0621/#entry-points
[project.entry-points."napari.manifest"]
napari-aicsimageio = "napari_aicsimageio:napari.yaml"

# https://setuptools.pypa.io/en/latest/userguide/pyproject_config.html
[tool.setuptools]
zip-safe = false
include-package-data = true
packages = { find = { exclude = ['scripts'] } }

[tool.setuptools.package-data]
"*" = ["*.yaml"]

[tool.black]
line-length = 88

[tool.isort]
ensure_newline_before_comments = true
force_grid_wrap = 0
include_trailing_comma = true
line_length = 88
multi_line_output = 3
profile = "black"
use_parentheses = true

# https://github.com/mgedmin/check-manifest#configuration
[tool.check-manifest]
ignore = [
  ".editorconfig",
  ".napari/**/*",
  ".pre-commit-config.yaml",
  "CODE_OF_CONDUCT.md",
  "codecov.yml",
  "CONTRIBUTING.md",
  "images/**/*",
  "Makefile",
  "scripts/**/*",
]

# https://docs.pytest.org/en/6.2.x/customize.html
[tool.pytest.ini_options]
minversion = "6.0"
xfail_strict = true
filterwarnings = [
  "error:::napari_aicsimageio",                       # make all internal warnings errors (test them directly)
  "ignore:distutils Version classes are deprecated:",
]

[tool.mypy]
files = "napari_aicsimageio/*.py"
ignore_missing_imports = true
disallow_untyped_defs = true
check_untyped_defs = true
show_error_codes = true

# https://flake8.pycqa.org/en/latest/user/options.html
# https://gitlab.com/durko/flake8-pyprojecttoml
[tool.flake8]
exclude = "scripts/**"
max-line-length = 88
ignore = "E203,E402,W291,W503"
min-python-version = "3.8.0"
per-file-ignores = []