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BRAIN-To MRI Protocols Repository

This is a repository of wiki, code and containers for processing data acquired using the BRAIN-TO imaging protocols on Siemens MAGNETOM Prisma 3 T (XA30).

Please refer the article titled, Advancing Clinical and Neuroscientific Research Through Accessible and Optimized Protocol Design at 3T, published in the RSNA Edition of Siemens MAGNETOM Flash (2023) for an overview.

Download Links for BRAIN-TO Protocols

  1. Complete Set
    https://zenodo.org/records/10685481

  2. Anatomy Set
    https://zenodo.org/records/10685475

  3. fMRI Set
    https://zenodo.org/records/10685458

  4. Diffusion Set
    https://zenodo.org/records/10685449

  5. ASL Set
    https://zenodo.org/records/10685308

This repository is being updated steadily and include the following

  1. Zenodo links for XA30 exar1 files
  2. Zenodo links for Protocol PDFs (for translating to other Prisma software versions)
  3. Wiki with recommended pipelines and tools
  4. Adding scripts and example code for processing data

Please feel free to contribute to our efforts.

For urgent requests, please e-mail.

Contributors

Sriranga Kashyap, BRAIN-To Lab, Krembil Brain Institute, UHN
Yuexin Xi, PhD Student, Dept. of Medical Biophysics, University of Toronto