From 56e4090b902768cdfa59cbd277d1382126ff1177 Mon Sep 17 00:00:00 2001 From: Cryaaa Date: Tue, 7 Jun 2022 15:45:53 +0200 Subject: [PATCH] Adding information important for tracking data --- README.md | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/README.md b/README.md index badfee7a..fb9c0c69 100644 --- a/README.md +++ b/README.md @@ -57,6 +57,9 @@ A table with the measurements will open: ![](https://github.com/BiAPoL/napari-clusters-plotter/raw/main/images/measure.png) Afterwards, you can save and/or close the measurement table. Also, close the Measure widget. +If you are uploading your own measurements make sure that there is a column that specifies the which measurement belongs to which label +by adding a column with the name "label". If you don't specify this column it will be assumed that measurements start at 1 and each +column describes the next label. #### Time-Lapse Measurements If you have 3D time-lapse data this will automatically be detected. In case you have 2D time-lapse data you need to @@ -64,6 +67,8 @@ convert it into a suitable shape using the function: `Tools > Utilities > Conver which can be found in the [napari time slicer](https://www.napari-hub.org/plugins/napari-time-slicer). Note that tables for time-lapse data will include an additional column named "frame", which indicates which slice in time the given row refers to. If you want to import your own csv files for time-lapse data make sure to include this column! +If you have tracking data where each column specifies measurements for a track instead of a label at a specific time point, +this column must not be added. ### Plotting