.gitattributes

# Generic rules
*.c     filter=complete_formatting gmx-doxygen
*.cpp   filter=complete_formatting gmx-doxygen
*.cu    filter=complete_formatting
*.cl    filter=complete_formatting
*.h     filter=complete_formatting gmx-doxygen
*.cuh   filter=complete_formatting
*.clh   filter=complete_formatting
CMakeLists.txt  filter=copyright
*.cmake         filter=copyright
*.cmakein       filter=copyright
*.py            filter=copyright
*.l             filter=copyright includesort
*.y             filter=copyright includesort
*.pre           filter=copyright includesort
*.tex           filter=copyright
*.bm            filter=copyright
# Exceptions: extra files to include
admin/*.sh                              filter=copyright
admin/git-pre-commit                    filter=copyright
# Exceptions: files to exclude
*.pc.cmakein                            !filter
cmake/CheckC*CompilerFlag.cmake         !filter
cmake/FindBLAS.cmake                    !filter
cmake/FindLAPACK.cmake                  !filter
cmake/ThreadMPI.cmake                   !filter
cmake/*.c                               -filter -gmx-doxygen
cmake/*.cpp                             -filter -gmx-doxygen
cmake/*.c.cmakein                       !filter
cmake/*.h                               !filter
cmake/*.cu                              !filter
cmake/*.cuh                             !filter
cmake/FindCUDA/*.cmake                  !filter
docs/doxygen/Doxyfile-*.cmakein         !filter
docs/doxygen/*.cpp                      !filter
docs/doxygen/examples/*.cpp             filter=clangformat
docs/doxygen/examples/*.c               filter=clangformat
docs/manual/UseLATEX.cmake              !filter
scripts/GMXRC.*                         !filter
scripts/make_gromos_rtp.py              !filter
share/template/template.cpp             filter=copyright
share/template/README.cmakein           !filter
src/gromacs/linearalgebra/gmx_blas/*    -filter -gmx-doxygen
src/gromacs/linearalgebra/gmx_lapack/*  -filter -gmx-doxygen
src/gromacs/selection/parser.cpp        -filter -gmx-doxygen
src/gromacs/selection/parser.h          -filter -gmx-doxygen
src/gromacs/selection/scanner.cpp       -filter -gmx-doxygen
src/gromacs/selection/scanner_flex.h    -filter
src/api/cpp/*cpp                        filter=clangformat
src/api/cpp/tests/*cpp                  filter=clangformat
*.eps                                   binary
*.jpg                                   binary
*.svg                                   binary
*.png                                   binary
*.pdf                                   binary
*.ogl                                   binary
*.gif                                   binary
*.jpg                                   binary
*.tpr                                   binary
*.trr                                   binary
*.tng                                   binary
*.xtc                                   binary
*.edr                                   binary
*.cpt                                   binary