updated citations

CTUAvastLab · Jun 6, 2024 · 8c04db2 · 8c04db2
1 parent 853cb73
commit 8c04db2
Show file tree

Hide file tree

Showing 6 changed files with 65 additions and 82 deletions.
diff --git a/CITATION.bib b/CITATION.bib
diff --git a/README.md b/README.md
@@ -38,15 +38,17 @@ Julia v1.9 or later is required.
 
 ## Citation
 
-For citing, please use the following entry for the [original paper](https://arxiv.org/abs/2105.09107):
+For citing, please use the following entry for the [original paper](https://jmlr.org/papers/v23/21-0174.html):
 ```
-@misc{MandlikMill,
-      title={Mill.jl and JsonGrinder.jl: automated differentiable feature extraction for learning from raw JSON data}, 
-      author={Simon Mandlik and Matej Racinsky and Viliam Lisy and Tomas Pevny},
-      year={2021},
-      eprint={2105.09107},
-      archivePrefix={arXiv},
-      primaryClass={stat.ML}
+@article{Mandlik2021,
+  author  = {Šimon Mandlík and Matěj Račinský and Viliam Lisý and Tomáš Pevný},
+  title   = {JsonGrinder.jl: automated differentiable neural architecture for embedding arbitrary JSON data},
+  journal = {Journal of Machine Learning Research},
+  year    = {2022},
+  volume  = {23},
+  number  = {298},
+  pages   = {1--5},
+  url     = {http://jmlr.org/papers/v23/21-0174.html}
 }
 ```
 

diff --git a/docs/make.jl b/docs/make.jl
@@ -52,38 +52,38 @@ makedocs(
              CitationBibliography(joinpath(@__DIR__, "references.bib"), style=:numeric)
          ],
          pages = [
-                  "Home" => "index.md",
-                  "Motivation" => "motivation.md",
-                  "Manual" => [
-                               "Nodes" => "manual/nodes.md",
-                               "More on nodes" => "manual/more_on_nodes.md",
-                               "Model reflection" => "manual/reflectin.md",
-                               "Bag aggregation" => "manual/aggregation.md",
-                               "Data in leaves" => "manual/leaf_data.md",
-                               "Missing data" => "manual/missing.md",
-                               "Custom nodes" => "manual/custom.md"
-                              ],
-                  "Examples" => [
-                                 "Musk" => "examples/musk/musk.md",
-                                 "Processing JSONs" => "examples/jsons.md",
-                                 "GNNs in 16 lines" => "examples/gnn.md",
-                                 "DAGs" => "examples/dag.md"
-                                ],
-                  "External tools" => [
-                                       "HierarchicalUtils.jl" => "tools/hierarchical.md"
-                                      ],
-                  "Public API" => [
-                            "Aggregation" => "api/aggregation.md",
-                            "Bags" => "api/bags.md",
-                            "Data nodes" => "api/data_nodes.md",
-                            "Model nodes" => "api/model_nodes.md",
-                            "Special Arrays" => "api/special_arrays.md",
-                            "Switches" => "api/switches.md",
-                            "Utilities" => "api/utilities.md"
-                           ],
-                  "References" => "references.md",
-                  "Citation" => "citation.md"
-                 ],
+             "Home" => "index.md",
+             "Motivation" => "motivation.md",
+             "Manual" => [
+                 "Nodes" => "manual/nodes.md",
+                 "More on nodes" => "manual/more_on_nodes.md",
+                 "Model reflection" => "manual/reflectin.md",
+                 "Bag aggregation" => "manual/aggregation.md",
+                 "Data in leaves" => "manual/leaf_data.md",
+                 "Missing data" => "manual/missing.md",
+                 "Custom nodes" => "manual/custom.md"
+             ],
+             "Examples" => [
+                 "Musk" => "examples/musk/musk.md",
+                 "Processing JSONs" => "examples/jsons.md",
+                 "GNNs in 16 lines" => "examples/gnn.md",
+                 "DAGs" => "examples/dag.md"
+             ],
+             "External tools" => [
+                 "HierarchicalUtils.jl" => "tools/hierarchical.md"
+             ],
+             "Public API" => [
+                 "Aggregation" => "api/aggregation.md",
+                 "Bags" => "api/bags.md",
+                 "Data nodes" => "api/data_nodes.md",
+                 "Model nodes" => "api/model_nodes.md",
+                 "Special Arrays" => "api/special_arrays.md",
+                 "Switches" => "api/switches.md",
+                 "Utilities" => "api/utilities.md"
+             ],
+             "References" => "references.md",
+             "Citation" => "citation.md"
+         ],
         )
 
 deploydocs(repo = "github.com/CTUAvastLab/Mill.jl.git")
diff --git a/docs/references.bib b/docs/references.bib
@@ -145,18 +145,12 @@ @inproceedings{Gulcehre2014
 }
 
 @article{Mandlik2021,
-  author       = {Simon Mandl{\'{\i}}k and
-                  Matej Racinsky and
-                  Viliam Lis{\'{y}} and
-                  Tom{\'{a}}s Pevn{\'{y}}},
-  title        = {JsonGrinder.jl: automated differentiable neural architecture for embedding
-                  arbitrary {JSON} data},
-  journal      = {J. Mach. Learn. Res.},
-  volume       = {23},
-  pages        = {298:1--298:5},
-  year         = {2022},
-  url          = {http://jmlr.org/papers/v23/21-0174.html},
-  timestamp    = {Wed, 07 Jun 2023 16:53:13 +0200},
-  biburl       = {https://dblp.org/rec/journals/jmlr/MandlikRLP22.bib},
-  bibsource    = {dblp computer science bibliography, https://dblp.org}
+  author  = {Šimon Mandlík and Matěj Račinský and Viliam Lisý and Tomáš Pevný},
+  title   = {JsonGrinder.jl: automated differentiable neural architecture for embedding arbitrary JSON data},
+  journal = {Journal of Machine Learning Research},
+  year    = {2022},
+  volume  = {23},
+  number  = {298},
+  pages   = {1--5},
+  url     = {http://jmlr.org/papers/v23/21-0174.html}
 }
diff --git a/docs/src/citation.md b/docs/src/citation.md
@@ -1,14 +1,16 @@
 # Citation
 
-For citing, please use the following entry for the [original paper](https://arxiv.org/abs/2105.09107):
+For citing, please use the following entry for the [original paper](https://jmlr.org/papers/v23/21-0174.html):
 ```
-@misc{mandlik2021milljl,
-      title={Mill.jl and JsonGrinder.jl: automated differentiable feature extraction for learning from raw JSON data}, 
-      author={Simon Mandlik and Matej Racinsky and Viliam Lisy and Tomas Pevny},
-      year={2021},
-      eprint={2105.09107},
-      archivePrefix={arXiv},
-      primaryClass={stat.ML}
+@article{Mandlik2021,
+  author  = {Šimon Mandlík and Matěj Račinský and Viliam Lisý and Tomáš Pevný},
+  title   = {JsonGrinder.jl: automated differentiable neural architecture for embedding arbitrary JSON data},
+  journal = {Journal of Machine Learning Research},
+  year    = {2022},
+  volume  = {23},
+  number  = {298},
+  pages   = {1--5},
+  url     = {http://jmlr.org/papers/v23/21-0174.html}
 }
 ```
 

diff --git a/docs/src/examples/musk/Manifest.toml b/docs/src/examples/musk/Manifest.toml
@@ -1,6 +1,6 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.10.3"
+julia_version = "1.10.4"
 manifest_format = "2.0"
 project_hash = "c980577c0415d2c228751f8ca1d6579dbbffa98a"
 
@@ -310,9 +310,9 @@ weakdeps = ["StaticArrays"]
 
 [[deps.Functors]]
 deps = ["LinearAlgebra"]
-git-tree-sha1 = "d3e63d9fa13f8eaa2f06f64949e2afc593ff52c2"
+git-tree-sha1 = "8a66c07630d6428eaab3506a0eabfcf4a9edea05"
 uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196"
-version = "0.4.10"
+version = "0.4.11"
 
 [[deps.Future]]
 deps = ["Random"]
@@ -332,9 +332,9 @@ version = "0.1.6"
 
 [[deps.HierarchicalUtils]]
 deps = ["DataStructures", "OrderedCollections"]
-git-tree-sha1 = "467ec10dba7f66b8076d77edeea03bb8f94ac7a8"
+path = "../../../../../HierarchicalUtils"
 uuid = "f9ccea15-0695-44b9-8113-df7c26ae4fa9"
-version = "2.2.1"
+version = "2.2.2"
 
 [[deps.IRTools]]
 deps = ["InteractiveUtils", "MacroTools"]