From 06d5f35f19fabd76a39f7fce1226131c856f5e4f Mon Sep 17 00:00:00 2001 From: Gabriele Bozzola Date: Thu, 16 Nov 2023 15:19:12 -0800 Subject: [PATCH] Use ClimaCore 0.10.56 --- .buildkite/pipeline.yml | 4 ++ Project.toml | 2 +- docs/Manifest.toml | 130 ++++++++++++---------------------------- examples/Manifest.toml | 64 ++++++++++---------- perf/Manifest.toml | 68 +++++++++++---------- 5 files changed, 114 insertions(+), 154 deletions(-) diff --git a/.buildkite/pipeline.yml b/.buildkite/pipeline.yml index 7974b5f12bc..5336dd48950 100644 --- a/.buildkite/pipeline.yml +++ b/.buildkite/pipeline.yml @@ -16,14 +16,18 @@ env: PERF_CONFIG_PATH: "config/perf_configs" MPI_CONFIG_PATH: "config/mpi_configs" SLURM_KILL_BAD_EXIT: 1 + LD_LIBRARY_PATH: "/central/software/hdf5/1.12.2-ompi415//lib:/central/software/OpenMPI/4.1.5_cuda-12.2//lib:/central/software/ucx/1.14.1_cuda-12.2//lib:/central/software/CUDA/12.2/lib64:/central/software/CUDA/12.2/extras/CUPTI/lib64:/central/software/CUDA/12.2/targets/x86_64-linux/lib:/central/software/julia/1.9.3/lib" steps: - label: "init :computer:" key: "init_cpu_env" command: - "echo $$JULIA_DEPOT_PATH" + - "echo HEY $LD_LIBRARY_PATH" + - "echo HEY $$LD_LIBRARY_PATH" - echo "--- Configure MPI" + - julia -e 'using Pkg; Pkg.add("MPIPreferences"); using MPIPreferences; use_system_binary()' - echo "--- Instantiate project" diff --git a/Project.toml b/Project.toml index 32e04552613..17c80c56c08 100644 --- a/Project.toml +++ b/Project.toml @@ -51,7 +51,7 @@ Artifacts = "1" AtmosphericProfilesLibrary = "0.1" CLIMAParameters = "0.7.25" ClimaComms = "0.5.6" -ClimaCore = "0.10.55" +ClimaCore = "0.10.56" ClimaTimeSteppers = "0.7.14" CloudMicrophysics = "0.15.0" Colors = "0.12" diff --git a/docs/Manifest.toml b/docs/Manifest.toml index 32a57907b04..a720353bf3c 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -5,9 +5,9 @@ manifest_format = "2.0" project_hash = "1b7b7b12f210f5da35bb4f69ad563a64237fde09" [[deps.ADTypes]] -git-tree-sha1 = "5d2e21d7b0d8c22f67483ef95ebdc39c0e6b6003" +git-tree-sha1 = "332e5d7baeff8497b923b730b994fa480601efc7" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.4" +version = "0.2.5" [[deps.AMD]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] @@ -234,12 +234,6 @@ git-tree-sha1 = "92394521ec4582c11d089a3b15b76ef2cb850994" uuid = "76a88914-d11a-5bdc-97e0-2f5a05c973a2" version = "0.10.0+1" -[[deps.Calculus]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad" -uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9" -version = "0.5.1" - [[deps.CatIndices]] deps = ["CustomUnitRanges", "OffsetArrays"] git-tree-sha1 = "a0f80a09780eed9b1d106a1bf62041c2efc995bc" @@ -444,9 +438,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "de4709e30bd5490435122c4b415b90a812c23fbf" +git-tree-sha1 = "5e365e0744ae1fdd44e62416343e7bfe848999d8" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.138.1" +version = "6.139.0" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -515,22 +509,6 @@ weakdeps = ["ChainRulesCore", "SparseArrays"] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" -[[deps.Distributions]] -deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] -git-tree-sha1 = "a6c00f894f24460379cb7136633cef54ac9f6f4a" -uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.103" - - [deps.Distributions.extensions] - DistributionsChainRulesCoreExt = "ChainRulesCore" - DistributionsDensityInterfaceExt = "DensityInterface" - DistributionsTestExt = "Test" - - [deps.Distributions.weakdeps] - ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" - DensityInterface = "b429d917-457f-4dbc-8f4c-0cc954292b1d" - Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40" - [[deps.DocStringExtensions]] deps = ["LibGit2"] git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d" @@ -554,12 +532,6 @@ deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"] uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" version = "1.6.0" -[[deps.DualNumbers]] -deps = ["Calculus", "NaNMath", "SpecialFunctions"] -git-tree-sha1 = "5837a837389fccf076445fce071c8ddaea35a566" -uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74" -version = "0.6.8" - [[deps.Elliptic]] git-tree-sha1 = "71c79e77221ab3a29918aaf6db4f217b89138608" uuid = "b305315f-e792-5b7a-8f41-49f472929428" @@ -601,9 +573,9 @@ version = "3.3.10+0" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] -git-tree-sha1 = "9d77cb1caf03e67514ba60bcfc47c6e131b1950c" +git-tree-sha1 = "a6e756a880fc419c8b41592010aebe6a5ce09136" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.2.7" +version = "0.2.8" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -734,12 +706,6 @@ git-tree-sha1 = "4cc2bb72df6ff40b055295fdef6d92955f9dede8" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" version = "1.12.2+2" -[[deps.HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] -git-tree-sha1 = "f218fe3736ddf977e0e772bc9a586b2383da2685" -uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.23" - [[deps.IOCapture]] deps = ["Logging", "Random"] git-tree-sha1 = "d75853a0bdbfb1ac815478bacd89cd27b550ace6" @@ -865,9 +831,9 @@ version = "0.2.1+0" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "95063c5bc98ba0c47e75e05ae71f1fed4deac6f6" +git-tree-sha1 = "b0737cbbe1c8da6f1139d1c23e35e7cea129c0af" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.12" +version = "0.9.13" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -897,9 +863,9 @@ weakdeps = ["BFloat16s"] [[deps.LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "a84f8f1e8caaaa4e3b4c101306b9e801d3883ace" +git-tree-sha1 = "98eaee04d96d973e79c25d49167668c5c8fb50e2" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.27+0" +version = "0.0.27+1" [[deps.LLVMLoopInfo]] git-tree-sha1 = "2e5c102cfc41f48ae4740c7eca7743cc7e7b75ea" @@ -924,9 +890,9 @@ uuid = "10f19ff3-798f-405d-979b-55457f8fc047" version = "0.1.15" [[deps.LazilyInitializedFields]] -git-tree-sha1 = "410fe4739a4b092f2ffe36fcb0dcc3ab12648ce1" +git-tree-sha1 = "8f7f3cabab0fd1800699663533b6d5cb3fc0e612" uuid = "0e77f7df-68c5-4e49-93ce-4cd80f5598bf" -version = "1.2.1" +version = "1.2.2" [[deps.Lazy]] deps = ["MacroTools"] @@ -1070,6 +1036,12 @@ deps = ["Artifacts", "Libdl"] uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" version = "2.28.2+0" +[[deps.Memoize]] +deps = ["MacroTools"] +git-tree-sha1 = "2b1dfcba103de714d31c033b5dacc2e4a12c7caa" +uuid = "c03570c3-d221-55d1-a50c-7939bbd78826" +version = "0.4.4" + [[deps.MicrosoftMPI_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "b01beb91d20b0d1312a9471a36017b5b339d26de" @@ -1185,12 +1157,6 @@ git-tree-sha1 = "2e73fe17cac3c62ad1aebe70d44c963c3cfdc3e3" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.6.2" -[[deps.PDMats]] -deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "f6f85a2edb9c356b829934ad3caed2ad0ebbfc99" -uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.29" - [[deps.PaddedViews]] deps = ["OffsetArrays"] git-tree-sha1 = "0fac6313486baae819364c52b4f483450a9d793f" @@ -1263,16 +1229,16 @@ uuid = "21216c6a-2e73-6563-6e65-726566657250" version = "1.4.1" [[deps.PrettyTables]] -deps = ["Crayons", "LaTeXStrings", "Markdown", "Printf", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "6842ce83a836fbbc0cfeca0b5a4de1a4dcbdb8d1" +deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"] +git-tree-sha1 = "3f43c2aae6aa4a2503b05587ab74f4f6aeff9fd0" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.8" +version = "2.3.0" [[deps.Primes]] deps = ["IntegerMathUtils"] -git-tree-sha1 = "4c9f306e5d6603ae203c2000dd460d81a5251489" +git-tree-sha1 = "1d05623b5952aed1307bf8b43bec8b8d1ef94b6e" uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae" -version = "0.5.4" +version = "0.5.5" [[deps.Printf]] deps = ["Unicode"] @@ -1284,17 +1250,17 @@ git-tree-sha1 = "b437cdb0385ed38312d91d9c00c20f3798b30256" uuid = "49802e3a-d2f1-5c88-81d8-b72133a6f568" version = "1.5.1" -[[deps.QuadGK]] -deps = ["DataStructures", "LinearAlgebra"] -git-tree-sha1 = "9ebcd48c498668c7fa0e97a9cae873fbee7bfee1" -uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" -version = "2.9.1" - [[deps.QuasiMonteCarlo]] -deps = ["Accessors", "ConcreteStructs", "Distributions", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Sobol", "StatsBase"] -git-tree-sha1 = "5654ee2631b0b291c639b2e6c81bbf06128bce85" +deps = ["Accessors", "ConcreteStructs", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Requires", "Sobol", "StatsBase"] +git-tree-sha1 = "cc086f8485bce77b6187141e1413c3b55f9a4341" uuid = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b" -version = "0.3.2" +version = "0.3.3" + + [deps.QuasiMonteCarlo.extensions] + QuasiMonteCarloDistributionsExt = "Distributions" + + [deps.QuasiMonteCarlo.weakdeps] + Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f" [[deps.REPL]] deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] @@ -1373,18 +1339,6 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" version = "1.3.0" -[[deps.Rmath]] -deps = ["Random", "Rmath_jll"] -git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b" -uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa" -version = "0.7.1" - -[[deps.Rmath_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "6ed52fdd3382cf21947b15e8870ac0ddbff736da" -uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f" -version = "0.4.0+0" - [[deps.RootSolvers]] deps = ["ForwardDiff"] git-tree-sha1 = "833d9914e748ca9329b762a82ec912897975f8d8" @@ -1408,9 +1362,9 @@ version = "0.1.0" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "dd2d18b981d09a2376ba49c5fab480f497992c88" +git-tree-sha1 = "baa0f858af55ea937183c988bd4b3e79e0bf699a" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.8.0" +version = "2.8.1" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -1544,17 +1498,6 @@ git-tree-sha1 = "1d77abd07f617c4868c33d4f5b9e1dbb2643c9cf" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" version = "0.34.2" -[[deps.StatsFuns]] -deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "f625d686d5a88bcd2b15cd81f18f98186fdc0c9a" -uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "1.3.0" -weakdeps = ["ChainRulesCore", "InverseFunctions"] - - [deps.StatsFuns.extensions] - StatsFunsChainRulesCoreExt = "ChainRulesCore" - StatsFunsInverseFunctionsExt = "InverseFunctions" - [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] git-tree-sha1 = "e7dd250422df290cee14960c1ee144b44ac3dd77" @@ -1712,6 +1655,11 @@ git-tree-sha1 = "323e3d0acf5e78a56dfae7bd8928c989b4f3083e" uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" version = "0.1.3" +[[deps.WeakValueDicts]] +git-tree-sha1 = "98528c2610a5479f091d470967a25becfd83edd0" +uuid = "897b6980-f191-5a31-bcb0-bf3c4585e0c1" +version = "0.1.0" + [[deps.WoodburyMatrices]] deps = ["LinearAlgebra", "SparseArrays"] git-tree-sha1 = "de67fa59e33ad156a590055375a30b23c40299d3" diff --git a/examples/Manifest.toml b/examples/Manifest.toml index 00ea63173e0..c3a1a6cc7c7 100644 --- a/examples/Manifest.toml +++ b/examples/Manifest.toml @@ -5,9 +5,9 @@ manifest_format = "2.0" project_hash = "0c14077b57d8fdc7663f22496855895314b0dc22" [[deps.ADTypes]] -git-tree-sha1 = "5d2e21d7b0d8c22f67483ef95ebdc39c0e6b6003" +git-tree-sha1 = "332e5d7baeff8497b923b730b994fa480601efc7" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.4" +version = "0.2.5" [[deps.AMD]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] @@ -172,9 +172,9 @@ weakdeps = ["SparseArrays"] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitFlags]] -git-tree-sha1 = "43b1a4a8f797c1cddadf60499a8a077d4af2cd2d" +git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" -version = "0.1.7" +version = "0.1.8" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] @@ -315,9 +315,9 @@ version = "0.5.6" [[deps.ClimaCore]] deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack"] -git-tree-sha1 = "4a5138604b65cfa2d30b90ddf5252106874940c3" +git-tree-sha1 = "ecbb0f31a6932f956e4b1e6908feae01c552ba20" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.55" +version = "0.10.56" [[deps.ClimaCoreMakie]] deps = ["ClimaCore", "Makie"] @@ -561,9 +561,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "de4709e30bd5490435122c4b415b90a812c23fbf" +git-tree-sha1 = "5e365e0744ae1fdd44e62416343e7bfe848999d8" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.138.1" +version = "6.139.0" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -758,9 +758,9 @@ version = "3.3.10+0" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] -git-tree-sha1 = "9d77cb1caf03e67514ba60bcfc47c6e131b1950c" +git-tree-sha1 = "a6e756a880fc419c8b41592010aebe6a5ce09136" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.2.7" +version = "0.2.8" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -1161,9 +1161,9 @@ version = "1.0.0" [[deps.JET]] deps = ["InteractiveUtils", "JuliaInterpreter", "LoweredCodeUtils", "MacroTools", "Pkg", "PrecompileTools", "Preferences", "Revise", "Test"] -git-tree-sha1 = "329c0d098e897173b75bf2a51cd0f94260530eb1" +git-tree-sha1 = "ea124c5bfafb9b3d225af35ed1a131686bdef6fd" uuid = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b" -version = "0.8.18" +version = "0.8.19" [[deps.JLD2]] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "PrecompileTools", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] @@ -1215,9 +1215,9 @@ version = "0.2.1+0" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "95063c5bc98ba0c47e75e05ae71f1fed4deac6f6" +git-tree-sha1 = "b0737cbbe1c8da6f1139d1c23e35e7cea129c0af" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.12" +version = "0.9.13" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -1265,9 +1265,9 @@ weakdeps = ["BFloat16s"] [[deps.LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "a84f8f1e8caaaa4e3b4c101306b9e801d3883ace" +git-tree-sha1 = "98eaee04d96d973e79c25d49167668c5c8fb50e2" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.27+0" +version = "0.0.27+1" [[deps.LLVMLoopInfo]] git-tree-sha1 = "2e5c102cfc41f48ae4740c7eca7743cc7e7b75ea" @@ -1922,16 +1922,16 @@ uuid = "21216c6a-2e73-6563-6e65-726566657250" version = "1.4.1" [[deps.PrettyTables]] -deps = ["Crayons", "LaTeXStrings", "Markdown", "Printf", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "6842ce83a836fbbc0cfeca0b5a4de1a4dcbdb8d1" +deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"] +git-tree-sha1 = "3f43c2aae6aa4a2503b05587ab74f4f6aeff9fd0" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.8" +version = "2.3.0" [[deps.Primes]] deps = ["IntegerMathUtils"] -git-tree-sha1 = "4c9f306e5d6603ae203c2000dd460d81a5251489" +git-tree-sha1 = "1d05623b5952aed1307bf8b43bec8b8d1ef94b6e" uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae" -version = "0.5.4" +version = "0.5.5" [[deps.Printf]] deps = ["Unicode"] @@ -1978,10 +1978,14 @@ uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" version = "2.9.1" [[deps.QuasiMonteCarlo]] -deps = ["Accessors", "ConcreteStructs", "Distributions", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Sobol", "StatsBase"] -git-tree-sha1 = "5654ee2631b0b291c639b2e6c81bbf06128bce85" +deps = ["Accessors", "ConcreteStructs", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Requires", "Sobol", "StatsBase"] +git-tree-sha1 = "cc086f8485bce77b6187141e1413c3b55f9a4341" uuid = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b" -version = "0.3.2" +version = "0.3.3" +weakdeps = ["Distributions"] + + [deps.QuasiMonteCarlo.extensions] + QuasiMonteCarloDistributionsExt = "Distributions" [[deps.REPL]] deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] @@ -2073,9 +2077,9 @@ version = "1.3.0" [[deps.Revise]] deps = ["CodeTracking", "Distributed", "FileWatching", "JuliaInterpreter", "LibGit2", "LoweredCodeUtils", "OrderedCollections", "Pkg", "REPL", "Requires", "UUIDs", "Unicode"] -git-tree-sha1 = "62fbfbbed77a20e9390c4f02219cb3b11d21708d" +git-tree-sha1 = "a38e7d70267283888bc83911626961f0b8d5966f" uuid = "295af30f-e4ad-537b-8983-00126c2a3abe" -version = "3.5.8" +version = "3.5.9" [[deps.RingLists]] deps = ["Random"] @@ -2123,9 +2127,9 @@ version = "0.1.0" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "dd2d18b981d09a2376ba49c5fab480f497992c88" +git-tree-sha1 = "baa0f858af55ea937183c988bd4b3e79e0bf699a" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.8.0" +version = "2.8.1" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2520,9 +2524,9 @@ version = "0.4.1" [[deps.Unitful]] deps = ["Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "a72d22c7e13fe2de562feda8645aa134712a87ee" +git-tree-sha1 = "242982d62ff0d1671e9029b52743062739255c7e" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.17.0" +version = "1.18.0" weakdeps = ["ConstructionBase", "InverseFunctions"] [deps.Unitful.extensions] diff --git a/perf/Manifest.toml b/perf/Manifest.toml index af0f302a8ff..4dd038359ef 100644 --- a/perf/Manifest.toml +++ b/perf/Manifest.toml @@ -5,9 +5,9 @@ manifest_format = "2.0" project_hash = "551bce7c2dee7d8c00ba5b736c87527020a6054b" [[deps.ADTypes]] -git-tree-sha1 = "5d2e21d7b0d8c22f67483ef95ebdc39c0e6b6003" +git-tree-sha1 = "332e5d7baeff8497b923b730b994fa480601efc7" uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" -version = "0.2.4" +version = "0.2.5" [[deps.AMD]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] @@ -178,9 +178,9 @@ uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" version = "1.3.2" [[deps.BitFlags]] -git-tree-sha1 = "43b1a4a8f797c1cddadf60499a8a077d4af2cd2d" +git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" -version = "0.1.7" +version = "0.1.8" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] @@ -326,9 +326,9 @@ version = "0.5.6" [[deps.ClimaCore]] deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack"] -git-tree-sha1 = "4a5138604b65cfa2d30b90ddf5252106874940c3" +git-tree-sha1 = "ecbb0f31a6932f956e4b1e6908feae01c552ba20" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.55" +version = "0.10.56" [[deps.ClimaCoreMakie]] deps = ["ClimaCore", "Makie"] @@ -578,9 +578,9 @@ version = "0.1.0+0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "de4709e30bd5490435122c4b415b90a812c23fbf" +git-tree-sha1 = "5e365e0744ae1fdd44e62416343e7bfe848999d8" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.138.1" +version = "6.139.0" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -787,9 +787,9 @@ version = "3.3.10+0" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] -git-tree-sha1 = "9d77cb1caf03e67514ba60bcfc47c6e131b1950c" +git-tree-sha1 = "a6e756a880fc419c8b41592010aebe6a5ce09136" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.2.7" +version = "0.2.8" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -1208,9 +1208,9 @@ version = "1.0.0" [[deps.JET]] deps = ["InteractiveUtils", "JuliaInterpreter", "LoweredCodeUtils", "MacroTools", "Pkg", "PrecompileTools", "Preferences", "Revise", "Test"] -git-tree-sha1 = "329c0d098e897173b75bf2a51cd0f94260530eb1" +git-tree-sha1 = "ea124c5bfafb9b3d225af35ed1a131686bdef6fd" uuid = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b" -version = "0.8.18" +version = "0.8.19" [[deps.JLD2]] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "PrecompileTools", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] @@ -1261,15 +1261,15 @@ uuid = "9c1d0b0a-7046-5b2e-a33f-ea22f176ac7e" version = "0.2.1+0" [[deps.JuliaSyntax]] -git-tree-sha1 = "d080fa670adde72509d03d91bf6ce6da2addb4be" +git-tree-sha1 = "1a4857ab55396b2da745f07f76ce4e696207b740" uuid = "70703baa-626e-46a2-a12c-08ffd08c73b4" -version = "0.4.6" +version = "0.4.7" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "95063c5bc98ba0c47e75e05ae71f1fed4deac6f6" +git-tree-sha1 = "b0737cbbe1c8da6f1139d1c23e35e7cea129c0af" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.12" +version = "0.9.13" weakdeps = ["EnzymeCore"] [deps.KernelAbstractions.extensions] @@ -1317,9 +1317,9 @@ weakdeps = ["BFloat16s"] [[deps.LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "a84f8f1e8caaaa4e3b4c101306b9e801d3883ace" +git-tree-sha1 = "98eaee04d96d973e79c25d49167668c5c8fb50e2" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.27+0" +version = "0.0.27+1" [[deps.LLVMLoopInfo]] git-tree-sha1 = "2e5c102cfc41f48ae4740c7eca7743cc7e7b75ea" @@ -1980,16 +1980,16 @@ uuid = "21216c6a-2e73-6563-6e65-726566657250" version = "1.4.1" [[deps.PrettyTables]] -deps = ["Crayons", "LaTeXStrings", "Markdown", "Printf", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "6842ce83a836fbbc0cfeca0b5a4de1a4dcbdb8d1" +deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"] +git-tree-sha1 = "3f43c2aae6aa4a2503b05587ab74f4f6aeff9fd0" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.8" +version = "2.3.0" [[deps.Primes]] deps = ["IntegerMathUtils"] -git-tree-sha1 = "4c9f306e5d6603ae203c2000dd460d81a5251489" +git-tree-sha1 = "1d05623b5952aed1307bf8b43bec8b8d1ef94b6e" uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae" -version = "0.5.4" +version = "0.5.5" [[deps.Printf]] deps = ["Unicode"] @@ -2048,10 +2048,14 @@ uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" version = "2.9.1" [[deps.QuasiMonteCarlo]] -deps = ["Accessors", "ConcreteStructs", "Distributions", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Sobol", "StatsBase"] -git-tree-sha1 = "5654ee2631b0b291c639b2e6c81bbf06128bce85" +deps = ["Accessors", "ConcreteStructs", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Requires", "Sobol", "StatsBase"] +git-tree-sha1 = "cc086f8485bce77b6187141e1413c3b55f9a4341" uuid = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b" -version = "0.3.2" +version = "0.3.3" +weakdeps = ["Distributions"] + + [deps.QuasiMonteCarlo.extensions] + QuasiMonteCarloDistributionsExt = "Distributions" [[deps.REPL]] deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"] @@ -2149,9 +2153,9 @@ version = "1.1.1" [[deps.Revise]] deps = ["CodeTracking", "Distributed", "FileWatching", "JuliaInterpreter", "LibGit2", "LoweredCodeUtils", "OrderedCollections", "Pkg", "REPL", "Requires", "UUIDs", "Unicode"] -git-tree-sha1 = "62fbfbbed77a20e9390c4f02219cb3b11d21708d" +git-tree-sha1 = "a38e7d70267283888bc83911626961f0b8d5966f" uuid = "295af30f-e4ad-537b-8983-00126c2a3abe" -version = "3.5.8" +version = "3.5.9" [[deps.RingLists]] deps = ["Random"] @@ -2199,9 +2203,9 @@ version = "0.1.0" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "dd2d18b981d09a2376ba49c5fab480f497992c88" +git-tree-sha1 = "baa0f858af55ea937183c988bd4b3e79e0bf699a" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.8.0" +version = "2.8.1" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2614,9 +2618,9 @@ version = "0.4.1" [[deps.Unitful]] deps = ["Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "a72d22c7e13fe2de562feda8645aa134712a87ee" +git-tree-sha1 = "242982d62ff0d1671e9029b52743062739255c7e" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.17.0" +version = "1.18.0" weakdeps = ["ConstructionBase", "InverseFunctions"] [deps.Unitful.extensions]