From 387224c6720bf04664ff45eede8acbe5d87ef0d3 Mon Sep 17 00:00:00 2001 From: Julia Sloan Date: Fri, 5 Apr 2024 11:13:24 -0700 Subject: [PATCH] tag v0.0.1 --- Project.toml | 4 +- experiments/AMIP/Manifest.toml | 288 ++++++++++++++-------------- experiments/AMIP/Project.toml | 1 - experiments/ClimaCore/Manifest.toml | 170 ++++++++-------- perf/Manifest.toml | 204 ++++++++++++-------- perf/Project.toml | 1 - test/Project.toml | 1 - 7 files changed, 339 insertions(+), 330 deletions(-) diff --git a/Project.toml b/Project.toml index 4c27e6cad8..7437136ecd 100644 --- a/Project.toml +++ b/Project.toml @@ -1,7 +1,7 @@ name = "ClimaCoupler" uuid = "4ade58fe-a8da-486c-bd89-46df092ec0c7" authors = ["CliMA Contributors "] -version = "0.1.0" +version = "0.0.1" [deps] ClimaAtmos = "b2c96348-7fb7-4fe0-8da9-78d88439e717" @@ -34,7 +34,7 @@ Dates = "1" DocStringExtensions = "0.8, 0.9" Insolation = "0.9.2" JLD2 = "0.4" -NCDatasets = "0.11, 0.12, 0.13, =0.14.1" +NCDatasets = "0.11, 0.12, 0.13, 0.14.2" Plots = "1.39.0" SciMLBase = "1, 2" StaticArrays = "1" diff --git a/experiments/AMIP/Manifest.toml b/experiments/AMIP/Manifest.toml index eb90b68d1c..9738cbe98f 100644 --- a/experiments/AMIP/Manifest.toml +++ b/experiments/AMIP/Manifest.toml @@ -2,7 +2,7 @@ julia_version = "1.10.2" manifest_format = "2.0" -project_hash = "284db48dcd39d58ad8518daa0c1caded1552fa4a" +project_hash = "b3a2000766f3d77386965c6863b17e8927e1f502" [[deps.ADTypes]] git-tree-sha1 = "016833eb52ba2d6bea9fcb50ca295980e728ee24" @@ -36,11 +36,32 @@ git-tree-sha1 = "2d9c9a55f9c93e8887ad391fbae72f8ef55e1177" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.5" +[[deps.Accessors]] +deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Markdown", "Test"] +git-tree-sha1 = "c0d491ef0b135fd7d63cbc6404286bc633329425" +uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" +version = "0.1.36" + + [deps.Accessors.extensions] + AccessorsAxisKeysExt = "AxisKeys" + AccessorsIntervalSetsExt = "IntervalSets" + AccessorsStaticArraysExt = "StaticArrays" + AccessorsStructArraysExt = "StructArrays" + AccessorsUnitfulExt = "Unitful" + + [deps.Accessors.weakdeps] + AxisKeys = "94b1ba4f-4ee9-5380-92f1-94cde586c3c5" + IntervalSets = "8197267c-284f-5f27-9208-e0e47529a953" + Requires = "ae029012-a4dd-5104-9daa-d747884805df" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" + StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" + Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" + [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cea4ac3f5b4bc4b3000aa55afb6e5626518948fa" +git-tree-sha1 = "6a55b747d1812e699320963ffde36f1ebdda4099" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "4.0.3" +version = "4.0.4" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -95,9 +116,9 @@ version = "7.9.0" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "e46675dbc095ddfdf2b5fba247d5a25f34e1f8a2" +git-tree-sha1 = "0330bc3e828a05d1073553fb56f9695d73077370" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.6.1" +version = "1.9.1" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -144,9 +165,9 @@ version = "0.4.7" [[deps.BFloat16s]] deps = ["LinearAlgebra", "Printf", "Random", "Test"] -git-tree-sha1 = "dbf84058d0a8cbbadee18d25cf606934b22d7c66" +git-tree-sha1 = "2c7cc21e8678eff479978a0a2ef5ce2f51b63dff" uuid = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" -version = "0.4.2" +version = "0.5.0" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] @@ -186,12 +207,6 @@ git-tree-sha1 = "aebf55e6d7795e02ca500a689d326ac979aaf89e" uuid = "9718e550-a3fa-408a-8086-8db961cd8217" version = "0.1.1" -[[deps.BenchmarkTools]] -deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] -git-tree-sha1 = "f1dff6729bc61f4d49e140da1af55dcd1ac97b2f" -uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" -version = "1.5.0" - [[deps.BitFlags]] git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" @@ -205,9 +220,9 @@ version = "0.1.5" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "fc69cbdb4277042f72c6e59cbc7024fbe3034b89" +git-tree-sha1 = "9a9610fbe5779636f75229e423e367124034af41" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" -version = "0.16.39" +version = "0.16.43" [[deps.Blosc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Lz4_jll", "Zlib_jll", "Zstd_jll"] @@ -302,9 +317,9 @@ version = "1.0.5" [[deps.CairoMakie]] deps = ["CRC32c", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools"] -git-tree-sha1 = "6dc1bbdd6a133adf4aa751d12dbc2c6ae59f873d" +git-tree-sha1 = "e64af6bea1f0dcde6ebecc581768074f992ad39b" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.11.9" +version = "0.11.10" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -347,21 +362,21 @@ weakdeps = ["CairoMakie", "GeoMakie"] [[deps.ClimaAtmos]] deps = ["Adapt", "ArgParse", "ArtifactWrappers", "Artifacts", "AtmosphericProfilesLibrary", "ClimaComms", "ClimaCore", "ClimaParams", "ClimaTimeSteppers", "CloudMicrophysics", "Colors", "Dates", "Dierckx", "DiffEqBase", "DiffEqCallbacks", "DocStringExtensions", "FastGaussQuadrature", "Insolation", "Interpolations", "IntervalSets", "Krylov", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "Pkg", "Printf", "RRTMGP", "Random", "RootSolvers", "SciMLBase", "StaticArrays", "Statistics", "StatsBase", "SurfaceFluxes", "Thermodynamics", "YAML"] -git-tree-sha1 = "6f61041395606445cb1c69233b0451f395231cec" +git-tree-sha1 = "4960972c563c63850c0c730939a0ec38281ac5c1" uuid = "b2c96348-7fb7-4fe0-8da9-78d88439e717" -version = "0.22.0" +version = "0.22.1" [[deps.ClimaComms]] deps = ["CUDA", "MPI"] -git-tree-sha1 = "f0350e34c91c8f3b5a11b5e39990439303d727b1" +git-tree-sha1 = "ef5d206be51fdf62cd0cbd63058e237128652cf7" uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" -version = "0.5.7" +version = "0.5.8" [[deps.ClimaCore]] deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "Unrolled"] -git-tree-sha1 = "bc6a0154e3bcc1657d3a75f697e216fb70121969" +git-tree-sha1 = "3c8ba2a248d30aaa7f0e72a3516b142521447377" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.13.2" +version = "0.13.3" weakdeps = ["Krylov"] [deps.ClimaCore.extensions] @@ -383,13 +398,13 @@ version = "0.3.14" deps = ["ClimaAtmos", "ClimaComms", "ClimaCore", "ClimaCoreTempestRemap", "ClimaLand", "ClimaParams", "Dates", "DocStringExtensions", "Insolation", "JLD2", "NCDatasets", "Plots", "SciMLBase", "StaticArrays", "Statistics", "SurfaceFluxes", "TempestRemap_jll", "Thermodynamics"] path = "../.." uuid = "4ade58fe-a8da-486c-bd89-46df092ec0c7" -version = "0.1.0" +version = "0.0.1" [[deps.ClimaLand]] deps = ["Adapt", "ArtifactWrappers", "CFTime", "CSV", "CUDA", "ClimaComms", "ClimaCore", "ClimaCoreTempestRemap", "DataFrames", "Dates", "DocStringExtensions", "Flux", "HTTP", "Insolation", "IntervalSets", "LinearAlgebra", "NCDatasets", "SciMLBase", "StaticArrays", "StatsBase", "SurfaceFluxes", "Thermodynamics", "cuDNN"] -git-tree-sha1 = "ee8d018563e6d0a84a56436b846ee886fbff34b1" +git-tree-sha1 = "6713d950e851d83fca5b80709d25493e9eb5946e" uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532" -version = "0.11.0" +version = "0.11.1" weakdeps = ["ClimaParams"] [deps.ClimaLand.extensions] @@ -419,12 +434,6 @@ git-tree-sha1 = "4d6c1e67ff8924b14313d71edd3fed6cf9586ae7" uuid = "6a9e3e04-43cd-43ba-94b9-e8782df3c71b" version = "0.18.0" -[[deps.CodecBzip2]] -deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] -git-tree-sha1 = "9b1ca1aa6ce3f71b3d1840c538a8210a043625eb" -uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" -version = "0.8.2" - [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] git-tree-sha1 = "59939d8a997469ee05c4b4944560a820f9ba0d73" @@ -500,18 +509,21 @@ weakdeps = ["Dates", "LinearAlgebra"] [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "1.0.5+1" +version = "1.1.0+0" [[deps.CompositionsBase]] git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" version = "0.1.2" +weakdeps = ["InverseFunctions"] [deps.CompositionsBase.extensions] CompositionsBaseInverseFunctionsExt = "InverseFunctions" - [deps.CompositionsBase.weakdeps] - InverseFunctions = "3587e190-3f89-42d0-90ee-14403ec27112" +[[deps.ConcreteStructs]] +git-tree-sha1 = "f749037478283d372048690eb3b5f92a79432b34" +uuid = "2569d6c7-a4a2-43d3-a901-331e8e4be471" +version = "0.2.3" [[deps.ConcurrentUtilities]] deps = ["Serialization", "Sockets"] @@ -521,9 +533,9 @@ version = "2.4.1" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "c53fc348ca4d40d7b371e71fd52251839080cbc9" +git-tree-sha1 = "260fd2400ed2dab602a7c15cf10c1933c59930a2" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.4" +version = "1.5.5" weakdeps = ["IntervalSets", "StaticArrays"] [deps.ConstructionBase.extensions] @@ -537,9 +549,9 @@ uuid = "6add18c4-b38d-439d-96f6-d6bc489c04c5" version = "0.1.3" [[deps.Contour]] -git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" +git-tree-sha1 = "439e35b0b36e2e5881738abc8857bd92ad6ff9a8" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" -version = "0.6.2" +version = "0.6.3" [[deps.CoordinateTransformations]] deps = ["LinearAlgebra", "StaticArrays"] @@ -620,10 +632,10 @@ uuid = "cd4c43a9-7502-52ba-aa6d-59fb2a88580b" version = "0.1.0+0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "b19b2bb1ecd1271334e4b25d605e50f75e68fcae" +deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] +git-tree-sha1 = "4fa023dbb15b3485426bbc6c43e030c14250d664" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.148.0" +version = "6.149.0" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -742,9 +754,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -git-tree-sha1 = "59c44d8fbc651c0395d8a6eda64b05ce316f58b4" +git-tree-sha1 = "18394bc78ac2814ff38fe5e0c9dc2cd171e2810c" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.5" +version = "0.7.2" weakdeps = ["Adapt"] [deps.EnzymeCore.extensions] @@ -870,10 +882,10 @@ version = "0.9.21" uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] -deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" +deps = ["LinearAlgebra"] +git-tree-sha1 = "bfe82a708416cf00b73a3198db0859c82f741558" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.9.3" +version = "1.10.0" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -905,9 +917,9 @@ version = "0.8.4" [[deps.Flux]] deps = ["Adapt", "ChainRulesCore", "Compat", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] -git-tree-sha1 = "502d0232ec6430d40b6e5b57637333f32192592e" +git-tree-sha1 = "a5475163b611812d073171583982c42ea48d22b0" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.14.14" +version = "0.14.15" [deps.Flux.extensions] FluxAMDGPUExt = "AMDGPU" @@ -928,9 +940,9 @@ uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" version = "2.13.93+0" [[deps.Format]] -git-tree-sha1 = "f3cf88025f6d03c194d73f5d13fee9004a108329" +git-tree-sha1 = "9c68794ef81b08086aeb32eeaf33531668d5f5fc" uuid = "1fa38f19-a742-5d3f-a2b9-30dd87b9d5f8" -version = "1.3.6" +version = "1.3.7" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] @@ -956,9 +968,9 @@ version = "2.13.1+0" [[deps.FreeTypeAbstraction]] deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics"] -git-tree-sha1 = "055626e1a35f6771fe99060e835b72ca61a52621" +git-tree-sha1 = "4b0af18ba7b34e3007f960217028502ff1dfda00" uuid = "663a7486-cb36-511b-a19d-713bb74d65c9" -version = "0.10.1" +version = "0.10.2" [[deps.FriBidi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -979,9 +991,9 @@ version = "0.1.3" [[deps.Functors]] deps = ["LinearAlgebra"] -git-tree-sha1 = "8ae30e786837ce0a24f5e2186938bf3251ab94b2" +git-tree-sha1 = "fa8d8fcfa6c38a9a7aa07233e35b3d9a39ec751a" uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196" -version = "0.4.8" +version = "0.4.9" [[deps.Future]] deps = ["Random"] @@ -1000,9 +1012,9 @@ version = "6.2.1+6" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] -git-tree-sha1 = "47e4686ec18a9620850bad110b79966132f14283" +git-tree-sha1 = "68e8ff56a4a355a85d2784b94614491f8c900cde" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "10.0.2" +version = "10.1.0" [[deps.GPUArraysCore]] deps = ["Adapt"] @@ -1109,9 +1121,9 @@ version = "1.3.1" [[deps.GnuTLS_jll]] deps = ["Artifacts", "GMP_jll", "JLLWrappers", "Libdl", "Nettle_jll", "P11Kit_jll", "Zlib_jll"] -git-tree-sha1 = "f3c0936dd685d57fa0b1eee7dbebf382b969ea63" +git-tree-sha1 = "383db7d3f900f4c1f47a8a04115b053c095e48d3" uuid = "0951126a-58fd-58f1-b5b3-b08c7c4a876d" -version = "3.8.3+0" +version = "3.8.4+0" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] @@ -1138,9 +1150,9 @@ version = "1.0.2" [[deps.HDF5]] deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"] -git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53" +git-tree-sha1 = "e856eef26cf5bf2b0f95f8f4fc37553c72c8641c" uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f" -version = "0.17.1" +version = "0.17.2" weakdeps = ["MPI"] [deps.HDF5.extensions] @@ -1148,15 +1160,15 @@ weakdeps = ["MPI"] [[deps.HDF5_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] -git-tree-sha1 = "e4591176488495bf44d7456bd73179d87d5e6eab" +git-tree-sha1 = "6384c847ff5056c5624e30e75b3ca48902cae0ac" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.14.3+1" +version = "1.14.3+2" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "995f762e0182ebc50548c434c171a5bb6635f8e4" +git-tree-sha1 = "8e59b47b9dc525b70550ca082ce85bcd7f5477cd" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.10.4" +version = "1.10.5" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -1296,6 +1308,16 @@ weakdeps = ["Random", "RecipesBase", "Statistics"] IntervalSetsRecipesBaseExt = "RecipesBase" IntervalSetsStatisticsExt = "Statistics" +[[deps.InverseFunctions]] +deps = ["Test"] +git-tree-sha1 = "896385798a8d49a255c398bd49162062e4a4c435" +uuid = "3587e190-3f89-42d0-90ee-14403ec27112" +version = "0.1.13" +weakdeps = ["Dates"] + + [deps.InverseFunctions.extensions] + DatesExt = "Dates" + [[deps.InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f" @@ -1430,9 +1452,9 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Requires", "Unicode"] -git-tree-sha1 = "7c6650580b4c3169d9905858160db895bff6d2e2" +git-tree-sha1 = "839c82932db86740ae729779e610f07a1640be9a" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "6.6.1" +version = "6.6.3" weakdeps = ["BFloat16s"] [deps.LLVM.extensions] @@ -1704,10 +1726,10 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.13" [[deps.Makie]] -deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FilePaths", "FixedPointNumbers", "Format", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Scratch", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "StableHashTraits", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] -git-tree-sha1 = "27af6be179c711fb916a597b6644fbb5b80becc0" +deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FilePaths", "FixedPointNumbers", "Format", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "InteractiveUtils", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Scratch", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun"] +git-tree-sha1 = "46ca613be7a1358fb93529726ea2fc28050d3ae0" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.20.8" +version = "0.20.9" [[deps.MakieCore]] deps = ["Observables", "REPL"] @@ -1729,12 +1751,6 @@ version = "0.4.2" deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" -[[deps.MathOptInterface]] -deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] -git-tree-sha1 = "679c1aec6934d322783bd15db4d18f898653be4f" -uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" -version = "1.27.0" - [[deps.MathTeXEngine]] deps = ["AbstractTrees", "Automa", "DataStructures", "FreeTypeAbstraction", "GeometryBasics", "LaTeXStrings", "REPL", "RelocatableFolders", "UnicodeFun"] git-tree-sha1 = "96ca8a313eb6437db5ffe946c457a401bbb8ce1d" @@ -1803,17 +1819,11 @@ git-tree-sha1 = "8d852646862c96e226367ad10c8af56099b4047e" uuid = "3b2b4ff1-bcff-5658-a3ee-dbcf1ce5ac09" version = "0.4.4" -[[deps.MutableArithmetics]] -deps = ["LinearAlgebra", "SparseArrays", "Test"] -git-tree-sha1 = "302fd161eb1c439e4115b51ae456da4e9984f130" -uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" -version = "1.4.1" - [[deps.NCDatasets]] deps = ["CFTime", "CommonDataModel", "DataStructures", "Dates", "DiskArrays", "NetCDF_jll", "NetworkOptions", "Printf"] -git-tree-sha1 = "79400cceb1655e7b2fe528a7b114c785bc152e59" +git-tree-sha1 = "d40d24d12f710c39d3a66be99c567ce0032f28a7" uuid = "85f8d34a-cbdd-5861-8df4-14fed0d494ab" -version = "0.14.1" +version = "0.14.3" [[deps.NLSolversBase]] deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] @@ -1829,9 +1839,9 @@ version = "4.5.1" [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "877f15c331337d54cf24c797d5bcb2e48ce21221" +git-tree-sha1 = "1fa1a14766c60e66ab22e242d45c1857c83a3805" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.9.12" +version = "0.9.13" [deps.NNlib.extensions] NNlibAMDGPUExt = "AMDGPU" @@ -1926,7 +1936,7 @@ version = "0.3.24+0" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" -version = "0.3.23+2" +version = "0.3.23+4" [[deps.OpenEXR]] deps = ["Colors", "FileIO", "OpenEXR_jll"] @@ -1959,9 +1969,9 @@ version = "1.4.2" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "60e3045590bd104a16fefb12836c00c0ef8c7f8c" +git-tree-sha1 = "3da7367955dcc5c54c1ba4d402ccdc09a1a3e046" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "3.0.13+0" +version = "3.0.13+1" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1970,10 +1980,16 @@ uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e" version = "0.5.5+0" [[deps.Optim]] -deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "d024bfb56144d947d4fafcd9cb5cafbe3410b133" +deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] +git-tree-sha1 = "d9b79c4eed437421ac4285148fcadf42e0700e89" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.9.2" +version = "1.9.4" + + [deps.Optim.extensions] + OptimMOIExt = "MathOptInterface" + + [deps.Optim.weakdeps] + MathOptInterface = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" [[deps.Optimisers]] deps = ["ChainRulesCore", "Functors", "LinearAlgebra", "Random", "Statistics"] @@ -2017,9 +2033,9 @@ version = "0.4.3" [[deps.PROJ_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "Libtiff_jll", "SQLite_jll"] -git-tree-sha1 = "f3e45027ea0f44a2725fbedfdb7ed118d5deec8d" +git-tree-sha1 = "84aa844bd56f62282116b413fbefb45e370e54d6" uuid = "58948b4f-47e0-5654-a9ad-f609743f8632" -version = "901.300.0+0" +version = "901.300.0+1" [[deps.Packing]] deps = ["GeometryBasics"] @@ -2057,12 +2073,6 @@ git-tree-sha1 = "eb3f9df2457819bf0a9019bd93cc451697a0751e" uuid = "2ae35dd2-176d-5d53-8349-f30d82d94d4f" version = "0.4.20" -[[deps.PikaParser]] -deps = ["DocStringExtensions"] -git-tree-sha1 = "d6ff87de27ff3082131f31a714d25ab6d0a88abf" -uuid = "3bbf5609-3e7b-44cd-8549-7c69f321e792" -version = "0.6.1" - [[deps.Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" uuid = "b98c9c47-44ae-5843-9183-064241ee97a0" @@ -2099,9 +2109,9 @@ version = "1.4.1" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "3c403c6590dd93b36752634115e20137e79ab4df" +git-tree-sha1 = "3bdfa4fa528ef21287ef659a89d686e8a1bcb1a9" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.40.2" +version = "1.40.3" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -2119,9 +2129,9 @@ version = "1.40.2" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "fca25670784a1ae44546bcb17288218310af2778" +git-tree-sha1 = "09f59c6dda37c7f73efddc5bdf6f92bc940eb484" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.7.9" +version = "0.7.12" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] @@ -2139,7 +2149,6 @@ deps = ["LinearAlgebra", "RecipesBase", "Setfield", "SparseArrays"] git-tree-sha1 = "a9c7a523d5ed375be3983db190f6a5874ae9286d" uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45" version = "4.0.6" -weakdeps = ["ChainRulesCore", "FFTW", "MakieCore", "MutableArithmetics"] [deps.Polynomials.extensions] PolynomialsChainRulesCoreExt = "ChainRulesCore" @@ -2147,6 +2156,12 @@ weakdeps = ["ChainRulesCore", "FFTW", "MakieCore", "MutableArithmetics"] PolynomialsMakieCoreExt = "MakieCore" PolynomialsMutableArithmeticsExt = "MutableArithmetics" + [deps.Polynomials.weakdeps] + ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" + FFTW = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" + MakieCore = "20f20a25-4f0e-4fdf-b5d1-57303727442b" + MutableArithmetics = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" + [[deps.PooledArrays]] deps = ["DataAPI", "Future"] git-tree-sha1 = "36d8b4b899628fb92c2749eb488d884a926614d3" @@ -2204,10 +2219,6 @@ version = "0.5.6" deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" -[[deps.Profile]] -deps = ["Printf"] -uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" - [[deps.ProgressBars]] deps = ["Printf"] git-tree-sha1 = "b437cdb0385ed38312d91d9c00c20f3798b30256" @@ -2315,9 +2326,9 @@ version = "0.6.12" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "a94d22ca9ad49a7a169ecbc5419c59b9793937cc" +git-tree-sha1 = "d8f131090f2e44b145084928856a561c83f43b27" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.12.0" +version = "3.13.0" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" @@ -2406,9 +2417,9 @@ version = "3.45.0+0" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "dce2d07e3519cb7817f2d89a7978c13fef30be87" +git-tree-sha1 = "d15c65e25615272e1b1c5edb1d307484c7942824" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.30.0" +version = "2.31.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2570,12 +2581,6 @@ git-tree-sha1 = "e08a62abc517eb79667d0a29dc08a3b589516bb5" uuid = "171d559e-b47b-412a-8079-5efa626c420e" version = "0.1.15" -[[deps.StableHashTraits]] -deps = ["Compat", "PikaParser", "SHA", "Tables", "TupleTools"] -git-tree-sha1 = "10dc702932fe05a0e09b8e5955f00794ea1e8b12" -uuid = "c5dd0088-6c3f-4803-b00e-f31a60c170fa" -version = "1.1.8" - [[deps.StackViews]] deps = ["OffsetArrays"] git-tree-sha1 = "46e589465204cd0c08b4bd97385e4fa79a0c770c" @@ -2628,24 +2633,21 @@ version = "1.7.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "1d77abd07f617c4868c33d4f5b9e1dbb2643c9cf" +git-tree-sha1 = "5cf7606d6cef84b543b483848d4ae08ad9832b21" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.34.2" +version = "0.34.3" [[deps.StatsFuns]] deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] git-tree-sha1 = "cef0472124fab0695b58ca35a77c6fb942fdab8a" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.1" +weakdeps = ["ChainRulesCore", "InverseFunctions"] [deps.StatsFuns.extensions] StatsFunsChainRulesCoreExt = "ChainRulesCore" StatsFunsInverseFunctionsExt = "InverseFunctions" - [deps.StatsFuns.weakdeps] - ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" - InverseFunctions = "3587e190-3f89-42d0-90ee-14403ec27112" - [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] git-tree-sha1 = "d6415f66f3d89c615929af907fdc6a3e17af0d8c" @@ -2703,10 +2705,10 @@ weakdeps = ["ClimaParams"] CreateParametersExt = "ClimaParams" [[deps.SymbolicIndexingInterface]] -deps = ["MacroTools", "RuntimeGeneratedFunctions"] -git-tree-sha1 = "f7b1fc9fc2bc938436b7684c243be7d317919056" +deps = ["Accessors", "ArrayInterface", "MacroTools", "RuntimeGeneratedFunctions", "StaticArraysCore"] +git-tree-sha1 = "4b7f4c80449d8baae8857d55535033981862619c" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.11" +version = "0.3.15" [[deps.TOML]] deps = ["Dates"] @@ -2769,9 +2771,9 @@ version = "1.0.1" [[deps.Thermodynamics]] deps = ["DocStringExtensions", "KernelAbstractions", "Random", "RootSolvers"] -git-tree-sha1 = "6098c65a2ad62312ac74cb1627c8fb33efe33287" +git-tree-sha1 = "deac04ad36638b10fde82470d5f128419f627e9a" uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c" -version = "0.12.5" +version = "0.12.6" weakdeps = ["ClimaParams"] [deps.Thermodynamics.extensions] @@ -2796,9 +2798,9 @@ uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" version = "0.5.23" [[deps.TranscodingStreams]] -git-tree-sha1 = "a09c933bebed12501890d8e92946bbab6a1690f1" +git-tree-sha1 = "71509f04d045ec714c4748c785a59045c3736349" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.10.5" +version = "0.10.7" weakdeps = ["Random", "Test"] [deps.TranscodingStreams.extensions] @@ -2840,11 +2842,6 @@ git-tree-sha1 = "ea3e54c2bdde39062abf5a9758a23735558705e1" uuid = "781d530d-4396-4725-bb49-402e4bee1e77" version = "1.4.0" -[[deps.TupleTools]] -git-tree-sha1 = "41d61b1c545b06279871ef1a4b5fcb2cac2191cd" -uuid = "9d95972d-f1c8-5527-a6e0-b4b365fa01f6" -version = "1.5.0" - [[deps.URIs]] git-tree-sha1 = "67db6cc7b3821e19ebe75791a9dd19c9b1188f2b" uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" @@ -2873,15 +2870,12 @@ deps = ["Dates", "LinearAlgebra", "Random"] git-tree-sha1 = "3c793be6df9dd77a0cf49d80984ef9ff996948fa" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" version = "1.19.0" +weakdeps = ["ConstructionBase", "InverseFunctions"] [deps.Unitful.extensions] ConstructionBaseUnitfulExt = "ConstructionBase" InverseFunctionsUnitfulExt = "InverseFunctions" - [deps.Unitful.weakdeps] - ConstructionBase = "187b0558-2788-49d3-abe0-74a17ed4e7c9" - InverseFunctions = "3587e190-3f89-42d0-90ee-14403ec27112" - [[deps.UnitfulLatexify]] deps = ["LaTeXStrings", "Latexify", "Unitful"] git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" @@ -2947,9 +2941,9 @@ version = "1.6.1" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "07e470dabc5a6a4254ffebc29a1b3fc01464e105" +git-tree-sha1 = "532e22cf7be8462035d092ff21fada7527e2c488" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.5+0" +version = "2.12.6+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -2959,9 +2953,9 @@ version = "1.1.34+0" [[deps.XZ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "31c421e5516a6248dfb22c194519e37effbf1f30" +git-tree-sha1 = "ac88fb95ae6447c8dda6a5503f3bafd496ae8632" uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" -version = "5.6.1+0" +version = "5.4.6+0" [[deps.Xorg_libICE_jll]] deps = ["Libdl", "Pkg"] @@ -3120,9 +3114,9 @@ version = "1.2.13+1" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" +git-tree-sha1 = "e678132f07ddb5bfa46857f0d7620fb9be675d3b" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.5+0" +version = "1.5.6+0" [[deps.Zygote]] deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] diff --git a/experiments/AMIP/Project.toml b/experiments/AMIP/Project.toml index f0c30ae8f2..54256fca92 100644 --- a/experiments/AMIP/Project.toml +++ b/experiments/AMIP/Project.toml @@ -52,7 +52,6 @@ ArtifactWrappers = "0.2" AtmosphericProfilesLibrary = "0.1" ClimaAnalysis = "0.5" ClimaCorePlots = "0.2" -ClimaCoupler = "0.1" ClimaTimeSteppers = "0.7" Colors = "0.12" Dierckx = "0.5" diff --git a/experiments/ClimaCore/Manifest.toml b/experiments/ClimaCore/Manifest.toml index d33feab263..f95818189a 100644 --- a/experiments/ClimaCore/Manifest.toml +++ b/experiments/ClimaCore/Manifest.toml @@ -85,9 +85,9 @@ version = "7.7.1" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "e46675dbc095ddfdf2b5fba247d5a25f34e1f8a2" +git-tree-sha1 = "0330bc3e828a05d1073553fb56f9695d73077370" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.6.1" +version = "1.9.1" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -110,9 +110,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "fe7ed7b33416db994f706f66e31bbd1b378f71b7" +git-tree-sha1 = "c946c5014cf4cdbfacacb363b110e7bffba3e742" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.6.0" +version = "1.6.1" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -121,12 +121,6 @@ weakdeps = ["SparseArrays"] [[deps.Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" -[[deps.BenchmarkTools]] -deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"] -git-tree-sha1 = "f1dff6729bc61f4d49e140da1af55dcd1ac97b2f" -uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" -version = "1.5.0" - [[deps.BitFlags]] git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b" uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" @@ -140,9 +134,9 @@ version = "0.1.5" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "fc69cbdb4277042f72c6e59cbc7024fbe3034b89" +git-tree-sha1 = "9a9610fbe5779636f75229e423e367124034af41" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" -version = "0.16.39" +version = "0.16.43" [[deps.BoundaryValueDiffEq]] deps = ["ADTypes", "Adapt", "ArrayInterface", "BandedMatrices", "ConcreteStructs", "DiffEqBase", "FastAlmostBandedMatrices", "ForwardDiff", "LinearAlgebra", "LinearSolve", "NonlinearSolve", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "Setfield", "SparseArrays", "SparseDiffTools", "Tricks", "TruncatedStacktraces", "UnPack"] @@ -228,15 +222,15 @@ weakdeps = ["SparseArrays"] [[deps.ClimaComms]] deps = ["CUDA", "MPI"] -git-tree-sha1 = "f0350e34c91c8f3b5a11b5e39990439303d727b1" +git-tree-sha1 = "ef5d206be51fdf62cd0cbd63058e237128652cf7" uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" -version = "0.5.7" +version = "0.5.8" [[deps.ClimaCore]] deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "Unrolled"] -git-tree-sha1 = "bc6a0154e3bcc1657d3a75f697e216fb70121969" +git-tree-sha1 = "3c8ba2a248d30aaa7f0e72a3516b142521447377" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.13.2" +version = "0.13.3" weakdeps = ["Krylov"] [deps.ClimaCore.extensions] @@ -244,9 +238,9 @@ weakdeps = ["Krylov"] [[deps.ClimaParams]] deps = ["DocStringExtensions", "TOML", "Test"] -git-tree-sha1 = "ec67949db856e01df4cbf7d6ddafefeda02f93ee" +git-tree-sha1 = "1a3d2455fff201bcf130bbd5a71ac16fc3c21fd1" uuid = "5c42b081-d73a-476f-9059-fd94b934656c" -version = "0.10.3" +version = "0.10.4" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -260,12 +254,6 @@ git-tree-sha1 = "70232f82ffaab9dc52585e0dd043b5e0c6b714f1" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" version = "0.1.12" -[[deps.CodecBzip2]] -deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] -git-tree-sha1 = "9b1ca1aa6ce3f71b3d1840c538a8210a043625eb" -uuid = "523fee87-0ab8-5b00-afb7-3ecf72e48cfd" -version = "0.8.2" - [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] git-tree-sha1 = "59939d8a997469ee05c4b4944560a820f9ba0d73" @@ -348,9 +336,9 @@ version = "2.4.1" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "c53fc348ca4d40d7b371e71fd52251839080cbc9" +git-tree-sha1 = "260fd2400ed2dab602a7c15cf10c1933c59930a2" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.4" +version = "1.5.5" weakdeps = ["IntervalSets", "StaticArrays"] [deps.ConstructionBase.extensions] @@ -358,9 +346,9 @@ weakdeps = ["IntervalSets", "StaticArrays"] ConstructionBaseStaticArraysExt = "StaticArrays" [[deps.Contour]] -git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" +git-tree-sha1 = "439e35b0b36e2e5881738abc8857bd92ad6ff9a8" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" -version = "0.6.2" +version = "0.6.3" [[deps.CpuId]] deps = ["Markdown"] @@ -543,9 +531,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -git-tree-sha1 = "59c44d8fbc651c0395d8a6eda64b05ce316f58b4" +git-tree-sha1 = "1bc328eec34ffd80357f84a84bb30e4374e9bd60" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.5" +version = "0.6.6" weakdeps = ["Adapt"] [deps.EnzymeCore.extensions] @@ -606,9 +594,9 @@ version = "3.3.10+0" [[deps.FastAlmostBandedMatrices]] deps = ["ArrayInterface", "ArrayLayouts", "BandedMatrices", "ConcreteStructs", "LazyArrays", "LinearAlgebra", "MatrixFactorizations", "PrecompileTools", "Reexport"] -git-tree-sha1 = "178316d87f883f0702e79d9c83a8049484c9f619" +git-tree-sha1 = "9dc913faf8552fd09b92a0d7fcc25f1d5609d795" uuid = "9d29842c-ecb8-4973-b1e9-a27b1157504e" -version = "0.1.0" +version = "0.1.1" [[deps.FastBroadcast]] deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] @@ -629,18 +617,18 @@ version = "2.0.2" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" +git-tree-sha1 = "82d8afa92ecf4b52d78d869f038ebfb881267322" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.2" +version = "1.16.3" [[deps.FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] -deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" +deps = ["LinearAlgebra"] +git-tree-sha1 = "bfe82a708416cf00b73a3198db0859c82f741558" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.9.3" +version = "1.10.0" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -677,9 +665,9 @@ uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" version = "2.13.93+0" [[deps.Format]] -git-tree-sha1 = "f3cf88025f6d03c194d73f5d13fee9004a108329" +git-tree-sha1 = "9c68794ef81b08086aeb32eeaf33531668d5f5fc" uuid = "1fa38f19-a742-5d3f-a2b9-30dd87b9d5f8" -version = "1.3.6" +version = "1.3.7" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] @@ -716,9 +704,9 @@ version = "0.1.3" [[deps.Functors]] deps = ["LinearAlgebra"] -git-tree-sha1 = "8ae30e786837ce0a24f5e2186938bf3251ab94b2" +git-tree-sha1 = "fa8d8fcfa6c38a9a7aa07233e35b3d9a39ec751a" uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196" -version = "0.4.8" +version = "0.4.9" [[deps.Future]] deps = ["Random"] @@ -768,9 +756,9 @@ version = "0.5.8" [[deps.GenericSchur]] deps = ["LinearAlgebra", "Printf"] -git-tree-sha1 = "fb69b2a645fa69ba5f474af09221b9308b160ce6" +git-tree-sha1 = "af49a0851f8113fcfae2ef5027c6d49d0acec39b" uuid = "c145ed77-6b09-5dd9-b285-bf645a82121e" -version = "0.5.3" +version = "0.5.4" [[deps.Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -808,9 +796,9 @@ version = "1.0.2" [[deps.HDF5]] deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"] -git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53" +git-tree-sha1 = "e856eef26cf5bf2b0f95f8f4fc37553c72c8641c" uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f" -version = "0.17.1" +version = "0.17.2" weakdeps = ["MPI"] [deps.HDF5.extensions] @@ -818,15 +806,15 @@ weakdeps = ["MPI"] [[deps.HDF5_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] -git-tree-sha1 = "e4591176488495bf44d7456bd73179d87d5e6eab" +git-tree-sha1 = "6384c847ff5056c5624e30e75b3ca48902cae0ac" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.14.3+1" +version = "1.14.3+2" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "db864f2d91f68a5912937af80327d288ea1f3aee" +git-tree-sha1 = "8e59b47b9dc525b70550ca082ce85bcd7f5477cd" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.10.3" +version = "1.10.5" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -891,9 +879,13 @@ version = "0.6.2" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "68772f49f54b479fa88ace904f6127f0a3bb2e46" +git-tree-sha1 = "896385798a8d49a255c398bd49162062e4a4c435" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.12" +version = "0.1.13" +weakdeps = ["Dates"] + + [deps.InverseFunctions.extensions] + DatesExt = "Dates" [[deps.InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -1004,9 +996,9 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Requires", "Unicode"] -git-tree-sha1 = "ddab4d40513bce53c8e3157825e245224f74fae7" +git-tree-sha1 = "839c82932db86740ae729779e610f07a1640be9a" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "6.6.0" +version = "6.6.3" weakdeps = ["BFloat16s"] [deps.LLVM.extensions] @@ -1068,9 +1060,9 @@ version = "0.1.15" [[deps.LazyArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "MacroTools", "MatrixFactorizations", "SparseArrays"] -git-tree-sha1 = "9cfca23ab83b0dfac93cb1a1ef3331ab9fe596a5" +git-tree-sha1 = "af45931c321aafdb96a6e0b26e81124e1b390e4e" uuid = "5078a376-72f3-5289-bfd5-ec5146d43c02" -version = "1.8.3" +version = "1.9.0" weakdeps = ["StaticArrays"] [deps.LazyArrays.extensions] @@ -1249,9 +1241,9 @@ version = "1.0.3" [[deps.LoopVectorization]] deps = ["ArrayInterface", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "0f5648fbae0d015e3abe5867bca2b362f67a5894" +git-tree-sha1 = "a13f3be5d84b9c95465d743c82af0b094ef9c2e2" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.166" +version = "0.12.169" weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"] [deps.LoopVectorization.extensions] @@ -1311,12 +1303,6 @@ version = "0.1.8" deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" -[[deps.MathOptInterface]] -deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] -git-tree-sha1 = "679c1aec6934d322783bd15db4d18f898653be4f" -uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" -version = "1.27.0" - [[deps.MatrixFactorizations]] deps = ["ArrayLayouts", "LinearAlgebra", "Printf", "Random"] git-tree-sha1 = "78f6e33434939b0ac9ba1df81e6d005ee85a7396" @@ -1363,12 +1349,6 @@ git-tree-sha1 = "cac9cc5499c25554cba55cd3c30543cff5ca4fab" uuid = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221" version = "0.2.4" -[[deps.MutableArithmetics]] -deps = ["LinearAlgebra", "SparseArrays", "Test"] -git-tree-sha1 = "302fd161eb1c439e4115b51ae456da4e9984f130" -uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" -version = "1.4.1" - [[deps.NLSolversBase]] deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] git-tree-sha1 = "a0b464d183da839699f4c79e7606d9d186ec172c" @@ -1458,9 +1438,9 @@ version = "1.4.2" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "60e3045590bd104a16fefb12836c00c0ef8c7f8c" +git-tree-sha1 = "3da7367955dcc5c54c1ba4d402ccdc09a1a3e046" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "3.0.13+0" +version = "3.0.13+1" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1469,10 +1449,16 @@ uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e" version = "0.5.5+0" [[deps.Optim]] -deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "MathOptInterface", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "d024bfb56144d947d4fafcd9cb5cafbe3410b133" +deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] +git-tree-sha1 = "d9b79c4eed437421ac4285148fcadf42e0700e89" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.9.2" +version = "1.9.4" + + [deps.Optim.extensions] + OptimMOIExt = "MathOptInterface" + + [deps.Optim.weakdeps] + MathOptInterface = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" [[deps.Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1556,9 +1542,9 @@ version = "1.4.1" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "3c403c6590dd93b36752634115e20137e79ab4df" +git-tree-sha1 = "3bdfa4fa528ef21287ef659a89d686e8a1bcb1a9" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.40.2" +version = "1.40.3" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -1582,9 +1568,9 @@ version = "0.4.4" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "fca25670784a1ae44546bcb17288218310af2778" +git-tree-sha1 = "09f59c6dda37c7f73efddc5bdf6f92bc940eb484" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.7.9" +version = "0.7.12" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] @@ -1644,10 +1630,6 @@ version = "0.5.6" deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" -[[deps.Profile]] -deps = ["Printf"] -uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79" - [[deps.ProgressBars]] deps = ["Printf"] git-tree-sha1 = "b437cdb0385ed38312d91d9c00c20f3798b30256" @@ -1996,9 +1978,9 @@ version = "1.7.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "1d77abd07f617c4868c33d4f5b9e1dbb2643c9cf" +git-tree-sha1 = "5cf7606d6cef84b543b483848d4ae08ad9832b21" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.34.2" +version = "0.34.3" [[deps.StatsFuns]] deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] @@ -2125,9 +2107,9 @@ uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" version = "0.5.23" [[deps.TranscodingStreams]] -git-tree-sha1 = "3caa21522e7efac1ba21834a03734c57b4611c7e" +git-tree-sha1 = "71509f04d045ec714c4748c785a59045c3736349" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.10.4" +version = "0.10.7" weakdeps = ["Random", "Test"] [deps.TranscodingStreams.extensions] @@ -2135,9 +2117,9 @@ weakdeps = ["Random", "Test"] [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "fadebab77bf3ae041f77346dd1c290173da5a443" +git-tree-sha1 = "7ee8ed8904e7dd5d31bb46294ef5644d9e2e44e4" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.1.20" +version = "0.1.21" [[deps.Tricks]] git-tree-sha1 = "eae1bb484cd63b36999ee58be2de6c178105112f" @@ -2244,9 +2226,9 @@ version = "1.31.0+0" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "07e470dabc5a6a4254ffebc29a1b3fc01464e105" +git-tree-sha1 = "532e22cf7be8462035d092ff21fada7527e2c488" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.5+0" +version = "2.12.6+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -2256,9 +2238,9 @@ version = "1.1.34+0" [[deps.XZ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "31c421e5516a6248dfb22c194519e37effbf1f30" +git-tree-sha1 = "ac88fb95ae6447c8dda6a5503f3bafd496ae8632" uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" -version = "5.6.1+0" +version = "5.4.6+0" [[deps.Xorg_libICE_jll]] deps = ["Libdl", "Pkg"] @@ -2411,9 +2393,9 @@ version = "1.2.13+1" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" +git-tree-sha1 = "e678132f07ddb5bfa46857f0d7620fb9be675d3b" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.5+0" +version = "1.5.6+0" [[deps.eudev_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "gperf_jll"] diff --git a/perf/Manifest.toml b/perf/Manifest.toml index 6515b38e07..d64e41392b 100644 --- a/perf/Manifest.toml +++ b/perf/Manifest.toml @@ -2,7 +2,7 @@ julia_version = "1.10.2" manifest_format = "2.0" -project_hash = "ed46c461d51248cd9cbdd956368072e478bae235" +project_hash = "37f350c7cc82974ab5f0385552c50ec3635366c3" [[deps.ADTypes]] git-tree-sha1 = "016833eb52ba2d6bea9fcb50ca295980e728ee24" @@ -31,11 +31,32 @@ git-tree-sha1 = "2d9c9a55f9c93e8887ad391fbae72f8ef55e1177" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.5" +[[deps.Accessors]] +deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Markdown", "Test"] +git-tree-sha1 = "c0d491ef0b135fd7d63cbc6404286bc633329425" +uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" +version = "0.1.36" + + [deps.Accessors.extensions] + AccessorsAxisKeysExt = "AxisKeys" + AccessorsIntervalSetsExt = "IntervalSets" + AccessorsStaticArraysExt = "StaticArrays" + AccessorsStructArraysExt = "StructArrays" + AccessorsUnitfulExt = "Unitful" + + [deps.Accessors.weakdeps] + AxisKeys = "94b1ba4f-4ee9-5380-92f1-94cde586c3c5" + IntervalSets = "8197267c-284f-5f27-9208-e0e47529a953" + Requires = "ae029012-a4dd-5104-9daa-d747884805df" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" + StructArrays = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" + Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" + [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cea4ac3f5b4bc4b3000aa55afb6e5626518948fa" +git-tree-sha1 = "6a55b747d1812e699320963ffde36f1ebdda4099" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "4.0.3" +version = "4.0.4" weakdeps = ["StaticArrays"] [deps.Adapt.extensions] @@ -84,9 +105,9 @@ version = "7.9.0" [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra"] -git-tree-sha1 = "e46675dbc095ddfdf2b5fba247d5a25f34e1f8a2" +git-tree-sha1 = "0330bc3e828a05d1073553fb56f9695d73077370" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "1.6.1" +version = "1.9.1" weakdeps = ["SparseArrays"] [deps.ArrayLayouts.extensions] @@ -121,15 +142,15 @@ version = "1.1.0" [[deps.BFloat16s]] deps = ["LinearAlgebra", "Printf", "Random", "Test"] -git-tree-sha1 = "dbf84058d0a8cbbadee18d25cf606934b22d7c66" +git-tree-sha1 = "2c7cc21e8678eff479978a0a2ef5ce2f51b63dff" uuid = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" -version = "0.4.2" +version = "0.5.0" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "fe7ed7b33416db994f706f66e31bbd1b378f71b7" +git-tree-sha1 = "c946c5014cf4cdbfacacb363b110e7bffba3e742" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.6.0" +version = "1.6.1" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -176,9 +197,9 @@ version = "0.1.5" [[deps.BlockArrays]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"] -git-tree-sha1 = "fc69cbdb4277042f72c6e59cbc7024fbe3034b89" +git-tree-sha1 = "9a9610fbe5779636f75229e423e367124034af41" uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e" -version = "0.16.39" +version = "0.16.43" [[deps.Blosc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Lz4_jll", "Zlib_jll", "Zstd_jll"] @@ -280,15 +301,15 @@ version = "0.22.0" [[deps.ClimaComms]] deps = ["CUDA", "MPI"] -git-tree-sha1 = "f0350e34c91c8f3b5a11b5e39990439303d727b1" +git-tree-sha1 = "ef5d206be51fdf62cd0cbd63058e237128652cf7" uuid = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d" -version = "0.5.7" +version = "0.5.8" [[deps.ClimaCore]] deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "Unrolled"] -git-tree-sha1 = "bc6a0154e3bcc1657d3a75f697e216fb70121969" +git-tree-sha1 = "3c8ba2a248d30aaa7f0e72a3516b142521447377" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.13.2" +version = "0.13.3" weakdeps = ["Krylov"] [deps.ClimaCore.extensions] @@ -310,13 +331,13 @@ version = "0.3.14" deps = ["ClimaAtmos", "ClimaComms", "ClimaCore", "ClimaCoreTempestRemap", "ClimaLand", "ClimaParams", "Dates", "DocStringExtensions", "Insolation", "JLD2", "NCDatasets", "Plots", "SciMLBase", "StaticArrays", "Statistics", "SurfaceFluxes", "TempestRemap_jll", "Thermodynamics"] path = ".." uuid = "4ade58fe-a8da-486c-bd89-46df092ec0c7" -version = "0.1.0" +version = "0.0.1" [[deps.ClimaLand]] deps = ["Adapt", "ArtifactWrappers", "CFTime", "CSV", "CUDA", "ClimaComms", "ClimaCore", "ClimaCoreTempestRemap", "DataFrames", "Dates", "DocStringExtensions", "Flux", "HTTP", "Insolation", "IntervalSets", "LinearAlgebra", "NCDatasets", "SciMLBase", "StaticArrays", "StatsBase", "SurfaceFluxes", "Thermodynamics", "cuDNN"] -git-tree-sha1 = "ee8d018563e6d0a84a56436b846ee886fbff34b1" +git-tree-sha1 = "6713d950e851d83fca5b80709d25493e9eb5946e" uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532" -version = "0.11.0" +version = "0.11.1" weakdeps = ["ClimaParams"] [deps.ClimaLand.extensions] @@ -324,9 +345,9 @@ weakdeps = ["ClimaParams"] [[deps.ClimaParams]] deps = ["DocStringExtensions", "TOML", "Test"] -git-tree-sha1 = "ec67949db856e01df4cbf7d6ddafefeda02f93ee" +git-tree-sha1 = "1a3d2455fff201bcf130bbd5a71ac16fc3c21fd1" uuid = "5c42b081-d73a-476f-9059-fd94b934656c" -version = "0.10.3" +version = "0.10.4" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -416,12 +437,15 @@ version = "1.1.0+0" git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" version = "0.1.2" +weakdeps = ["InverseFunctions"] [deps.CompositionsBase.extensions] CompositionsBaseInverseFunctionsExt = "InverseFunctions" - [deps.CompositionsBase.weakdeps] - InverseFunctions = "3587e190-3f89-42d0-90ee-14403ec27112" +[[deps.ConcreteStructs]] +git-tree-sha1 = "f749037478283d372048690eb3b5f92a79432b34" +uuid = "2569d6c7-a4a2-43d3-a901-331e8e4be471" +version = "0.2.3" [[deps.ConcurrentUtilities]] deps = ["Serialization", "Sockets"] @@ -431,9 +455,9 @@ version = "2.4.1" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "c53fc348ca4d40d7b371e71fd52251839080cbc9" +git-tree-sha1 = "260fd2400ed2dab602a7c15cf10c1933c59930a2" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.4" +version = "1.5.5" weakdeps = ["IntervalSets", "StaticArrays"] [deps.ConstructionBase.extensions] @@ -447,9 +471,9 @@ uuid = "6add18c4-b38d-439d-96f6-d6bc489c04c5" version = "0.1.3" [[deps.Contour]] -git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" +git-tree-sha1 = "439e35b0b36e2e5881738abc8857bd92ad6ff9a8" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" -version = "0.6.2" +version = "0.6.3" [[deps.CpuId]] deps = ["Markdown"] @@ -518,10 +542,10 @@ uuid = "cd4c43a9-7502-52ba-aa6d-59fb2a88580b" version = "0.1.0+0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "b19b2bb1ecd1271334e4b25d605e50f75e68fcae" +deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] +git-tree-sha1 = "4fa023dbb15b3485426bbc6c43e030c14250d664" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.148.0" +version = "6.149.0" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -612,9 +636,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" [[deps.EnzymeCore]] -git-tree-sha1 = "59c44d8fbc651c0395d8a6eda64b05ce316f58b4" +git-tree-sha1 = "18394bc78ac2814ff38fe5e0c9dc2cd171e2810c" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.6.5" +version = "0.7.2" weakdeps = ["Adapt"] [deps.EnzymeCore.extensions] @@ -698,9 +722,9 @@ version = "1.0.2" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "c5c28c245101bd59154f649e19b038d15901b5dc" +git-tree-sha1 = "82d8afa92ecf4b52d78d869f038ebfb881267322" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.2" +version = "1.16.3" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -712,10 +736,10 @@ version = "0.9.21" uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] -deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "5b93957f6dcd33fc343044af3d48c215be2562f1" +deps = ["LinearAlgebra"] +git-tree-sha1 = "bfe82a708416cf00b73a3198db0859c82f741558" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.9.3" +version = "1.10.0" [deps.FillArrays.extensions] FillArraysPDMatsExt = "PDMats" @@ -751,9 +775,9 @@ version = "0.8.4" [[deps.Flux]] deps = ["Adapt", "ChainRulesCore", "Compat", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] -git-tree-sha1 = "5a626d6ef24ae0a8590c22dc12096fb65eb66325" +git-tree-sha1 = "a5475163b611812d073171583982c42ea48d22b0" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.14.13" +version = "0.14.15" [deps.Flux.extensions] FluxAMDGPUExt = "AMDGPU" @@ -774,9 +798,9 @@ uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" version = "2.13.93+0" [[deps.Format]] -git-tree-sha1 = "f3cf88025f6d03c194d73f5d13fee9004a108329" +git-tree-sha1 = "9c68794ef81b08086aeb32eeaf33531668d5f5fc" uuid = "1fa38f19-a742-5d3f-a2b9-30dd87b9d5f8" -version = "1.3.6" +version = "1.3.7" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] @@ -813,9 +837,9 @@ version = "0.1.3" [[deps.Functors]] deps = ["LinearAlgebra"] -git-tree-sha1 = "8ae30e786837ce0a24f5e2186938bf3251ab94b2" +git-tree-sha1 = "fa8d8fcfa6c38a9a7aa07233e35b3d9a39ec751a" uuid = "d9f16b24-f501-4c13-a1f2-28368ffc5196" -version = "0.4.8" +version = "0.4.9" [[deps.Future]] deps = ["Random"] @@ -892,9 +916,9 @@ version = "1.3.1" [[deps.GnuTLS_jll]] deps = ["Artifacts", "GMP_jll", "JLLWrappers", "Libdl", "Nettle_jll", "P11Kit_jll", "Zlib_jll"] -git-tree-sha1 = "f3c0936dd685d57fa0b1eee7dbebf382b969ea63" +git-tree-sha1 = "383db7d3f900f4c1f47a8a04115b053c095e48d3" uuid = "0951126a-58fd-58f1-b5b3-b08c7c4a876d" -version = "3.8.3+0" +version = "3.8.4+0" [[deps.Graphite2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -909,9 +933,9 @@ version = "1.0.2" [[deps.HDF5]] deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"] -git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53" +git-tree-sha1 = "e856eef26cf5bf2b0f95f8f4fc37553c72c8641c" uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f" -version = "0.17.1" +version = "0.17.2" weakdeps = ["MPI"] [deps.HDF5.extensions] @@ -919,15 +943,15 @@ weakdeps = ["MPI"] [[deps.HDF5_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "OpenSSL_jll", "TOML", "Zlib_jll", "libaec_jll"] -git-tree-sha1 = "e4591176488495bf44d7456bd73179d87d5e6eab" +git-tree-sha1 = "6384c847ff5056c5624e30e75b3ca48902cae0ac" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.14.3+1" +version = "1.14.3+2" [[deps.HTTP]] deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "ExceptionUnwrapping", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "db864f2d91f68a5912937af80327d288ea1f3aee" +git-tree-sha1 = "8e59b47b9dc525b70550ca082ce85bcd7f5477cd" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.10.3" +version = "1.10.5" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -1004,6 +1028,16 @@ weakdeps = ["Random", "RecipesBase", "Statistics"] IntervalSetsRecipesBaseExt = "RecipesBase" IntervalSetsStatisticsExt = "Statistics" +[[deps.InverseFunctions]] +deps = ["Test"] +git-tree-sha1 = "896385798a8d49a255c398bd49162062e4a4c435" +uuid = "3587e190-3f89-42d0-90ee-14403ec27112" +version = "0.1.13" +weakdeps = ["Dates"] + + [deps.InverseFunctions.extensions] + DatesExt = "Dates" + [[deps.InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f" @@ -1103,9 +1137,9 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Preferences", "Printf", "Requires", "Unicode"] -git-tree-sha1 = "ddab4d40513bce53c8e3157825e245224f74fae7" +git-tree-sha1 = "839c82932db86740ae729779e610f07a1640be9a" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "6.6.0" +version = "6.6.3" weakdeps = ["BFloat16s"] [deps.LLVM.extensions] @@ -1434,9 +1468,9 @@ version = "4.5.1" [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "877f15c331337d54cf24c797d5bcb2e48ce21221" +git-tree-sha1 = "1fa1a14766c60e66ab22e242d45c1857c83a3805" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.9.12" +version = "0.9.13" [deps.NNlib.extensions] NNlibAMDGPUExt = "AMDGPU" @@ -1541,9 +1575,9 @@ version = "1.4.2" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "60e3045590bd104a16fefb12836c00c0ef8c7f8c" +git-tree-sha1 = "3da7367955dcc5c54c1ba4d402ccdc09a1a3e046" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "3.0.13+0" +version = "3.0.13+1" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1627,9 +1661,9 @@ version = "1.4.1" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] -git-tree-sha1 = "3c403c6590dd93b36752634115e20137e79ab4df" +git-tree-sha1 = "3bdfa4fa528ef21287ef659a89d686e8a1bcb1a9" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.40.2" +version = "1.40.3" [deps.Plots.extensions] FileIOExt = "FileIO" @@ -1647,9 +1681,9 @@ version = "1.40.2" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "fca25670784a1ae44546bcb17288218310af2778" +git-tree-sha1 = "09f59c6dda37c7f73efddc5bdf6f92bc940eb484" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.7.9" +version = "0.7.12" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] @@ -1790,9 +1824,9 @@ version = "0.6.12" [[deps.RecursiveArrayTools]] deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "a94d22ca9ad49a7a169ecbc5419c59b9793937cc" +git-tree-sha1 = "d8f131090f2e44b145084928856a561c83f43b27" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "3.12.0" +version = "3.13.0" [deps.RecursiveArrayTools.extensions] RecursiveArrayToolsFastBroadcastExt = "FastBroadcast" @@ -1851,10 +1885,10 @@ uuid = "94e857df-77ce-4151-89e5-788b33177be4" version = "0.1.0" [[deps.SciMLBase]] -deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] -git-tree-sha1 = "3a281a9fce9cd62b849d7f16e412933a5fe755cb" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "d15c65e25615272e1b1c5edb1d307484c7942824" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.29.0" +version = "2.31.0" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -1881,6 +1915,11 @@ git-tree-sha1 = "10499f619ef6e890f3f4a38914481cc868689cd5" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" version = "0.3.8" +[[deps.SciMLStructures]] +git-tree-sha1 = "5833c10ce83d690c124beedfe5f621b50b02ba4d" +uuid = "53ae85a6-f571-4167-b2af-e1d143709226" +version = "1.1.0" + [[deps.Scratch]] deps = ["Dates"] git-tree-sha1 = "3bac05bc7e74a75fd9cba4295cde4045d9fe2386" @@ -2010,9 +2049,9 @@ version = "1.7.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "1d77abd07f617c4868c33d4f5b9e1dbb2643c9cf" +git-tree-sha1 = "5cf7606d6cef84b543b483848d4ae08ad9832b21" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.34.2" +version = "0.34.3" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] @@ -2065,10 +2104,10 @@ weakdeps = ["ClimaParams"] CreateParametersExt = "ClimaParams" [[deps.SymbolicIndexingInterface]] -deps = ["MacroTools", "RuntimeGeneratedFunctions"] -git-tree-sha1 = "f7b1fc9fc2bc938436b7684c243be7d317919056" +deps = ["Accessors", "ArrayInterface", "MacroTools", "RuntimeGeneratedFunctions", "StaticArraysCore"] +git-tree-sha1 = "4b7f4c80449d8baae8857d55535033981862619c" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.11" +version = "0.3.15" [[deps.TOML]] deps = ["Dates"] @@ -2133,9 +2172,9 @@ version = "1.0.1" [[deps.Thermodynamics]] deps = ["DocStringExtensions", "KernelAbstractions", "Random", "RootSolvers"] -git-tree-sha1 = "6098c65a2ad62312ac74cb1627c8fb33efe33287" +git-tree-sha1 = "deac04ad36638b10fde82470d5f128419f627e9a" uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c" -version = "0.12.5" +version = "0.12.6" weakdeps = ["ClimaParams"] [deps.Thermodynamics.extensions] @@ -2154,9 +2193,9 @@ uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" version = "0.5.23" [[deps.TranscodingStreams]] -git-tree-sha1 = "3caa21522e7efac1ba21834a03734c57b4611c7e" +git-tree-sha1 = "71509f04d045ec714c4748c785a59045c3736349" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.10.4" +version = "0.10.7" weakdeps = ["Random", "Test"] [deps.TranscodingStreams.extensions] @@ -2226,15 +2265,12 @@ deps = ["Dates", "LinearAlgebra", "Random"] git-tree-sha1 = "3c793be6df9dd77a0cf49d80984ef9ff996948fa" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" version = "1.19.0" +weakdeps = ["ConstructionBase", "InverseFunctions"] [deps.Unitful.extensions] ConstructionBaseUnitfulExt = "ConstructionBase" InverseFunctionsUnitfulExt = "InverseFunctions" - [deps.Unitful.weakdeps] - ConstructionBase = "187b0558-2788-49d3-abe0-74a17ed4e7c9" - InverseFunctions = "3587e190-3f89-42d0-90ee-14403ec27112" - [[deps.UnitfulLatexify]] deps = ["LaTeXStrings", "Latexify", "Unitful"] git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" @@ -2300,9 +2336,9 @@ version = "1.6.1" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "07e470dabc5a6a4254ffebc29a1b3fc01464e105" +git-tree-sha1 = "532e22cf7be8462035d092ff21fada7527e2c488" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.5+0" +version = "2.12.6+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -2312,9 +2348,9 @@ version = "1.1.34+0" [[deps.XZ_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "31c421e5516a6248dfb22c194519e37effbf1f30" +git-tree-sha1 = "ac88fb95ae6447c8dda6a5503f3bafd496ae8632" uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800" -version = "5.6.1+0" +version = "5.4.6+0" [[deps.Xorg_libICE_jll]] deps = ["Libdl", "Pkg"] @@ -2473,9 +2509,9 @@ version = "1.2.13+1" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" +git-tree-sha1 = "e678132f07ddb5bfa46857f0d7620fb9be675d3b" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.5+0" +version = "1.5.6+0" [[deps.Zygote]] deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] diff --git a/perf/Project.toml b/perf/Project.toml index e064cb0b87..9ec37cd0ef 100644 --- a/perf/Project.toml +++ b/perf/Project.toml @@ -48,7 +48,6 @@ ArgParse = "1.1" ArtifactWrappers = "0.2" AtmosphericProfilesLibrary = "0.1" ClimaCorePlots = "0.2" -ClimaCoupler = "0.1" ClimaTimeSteppers = "0.7" Colors = "0.12" Dierckx = "0.5" diff --git a/test/Project.toml b/test/Project.toml index 1b19987fba..d552ec1f9a 100644 --- a/test/Project.toml +++ b/test/Project.toml @@ -38,7 +38,6 @@ Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" [compat] Aqua = "0.8" ArtifactWrappers = "0.2" -ClimaCoupler = "0.1" Dates = "1" Downloads = "1" IntervalSets = "0.5, 0.6, 0.7"