From d3ebd3a269543abd4724ebb9a740ba5d18f734d8 Mon Sep 17 00:00:00 2001 From: Julia Sloan Date: Thu, 21 Sep 2023 13:26:57 -0700 Subject: [PATCH] fix perf manifest --- perf/Manifest.toml | 329 ++++++++++++++++++++++++++++++++++++++++----- 1 file changed, 294 insertions(+), 35 deletions(-) diff --git a/perf/Manifest.toml b/perf/Manifest.toml index c7665b3a09..432fa66525 100644 --- a/perf/Manifest.toml +++ b/perf/Manifest.toml @@ -16,10 +16,15 @@ uuid = "14f7f29c-3bd6-536c-9a0b-7339e30b5a3e" version = "0.5.2" [[deps.AbstractFFTs]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] +deps = ["LinearAlgebra"] git-tree-sha1 = "d92ad398961a3ed262d8bf04a1a2b8340f915fef" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" version = "1.5.0" +weakdeps = ["ChainRulesCore", "Test"] + + [deps.AbstractFFTs.extensions] + AbstractFFTsChainRulesCoreExt = "ChainRulesCore" + AbstractFFTsTestExt = "Test" [[deps.AbstractTrees]] git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c" @@ -31,6 +36,10 @@ deps = ["LinearAlgebra", "Requires"] git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" version = "3.6.2" +weakdeps = ["StaticArrays"] + + [deps.Adapt.extensions] + AdaptStaticArraysExt = "StaticArrays" [[deps.ArgParse]] deps = ["Logging", "TextWrap"] @@ -54,6 +63,22 @@ git-tree-sha1 = "f83ec24f76d4c8f525099b2ac475fc098138ec31" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" version = "7.4.11" + [deps.ArrayInterface.extensions] + ArrayInterfaceBandedMatricesExt = "BandedMatrices" + ArrayInterfaceBlockBandedMatricesExt = "BlockBandedMatrices" + ArrayInterfaceCUDAExt = "CUDA" + ArrayInterfaceGPUArraysCoreExt = "GPUArraysCore" + ArrayInterfaceStaticArraysCoreExt = "StaticArraysCore" + ArrayInterfaceTrackerExt = "Tracker" + + [deps.ArrayInterface.weakdeps] + BandedMatrices = "aae01518-5342-5314-be14-df237901396f" + BlockBandedMatrices = "ffab5731-97b5-5995-9138-79e8c1846df0" + CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" + GPUArraysCore = "46192b85-c4d5-4398-a991-12ede77f4527" + StaticArraysCore = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" + Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" + [[deps.ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d" @@ -61,10 +86,14 @@ uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" version = "0.1.29" [[deps.ArrayLayouts]] -deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] +deps = ["FillArrays", "LinearAlgebra"] git-tree-sha1 = "0d61921af2799487b80453a44abb57db7a0c1381" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" version = "1.4.1" +weakdeps = ["SparseArrays"] + + [deps.ArrayLayouts.extensions] + ArrayLayoutsSparseArraysExt = "SparseArrays" [[deps.ArtifactWrappers]] deps = ["Downloads", "Pkg"] @@ -100,10 +129,14 @@ uuid = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" version = "0.4.2" [[deps.BandedMatrices]] -deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools", "SparseArrays"] +deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] git-tree-sha1 = "0b816941273b5b162be122a6c94d706e3b3125ca" uuid = "aae01518-5342-5314-be14-df237901396f" version = "0.17.38" +weakdeps = ["SparseArrays"] + + [deps.BandedMatrices.extensions] + BandedMatricesSparseArraysExt = "SparseArrays" [[deps.Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -203,10 +236,14 @@ uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" version = "1.16.0" [[deps.ChangesOfVariables]] -deps = ["InverseFunctions", "LinearAlgebra", "Test"] +deps = ["LinearAlgebra", "Test"] git-tree-sha1 = "2fba81a302a7be671aefe194f0525ef231104e7f" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" version = "0.1.8" +weakdeps = ["InverseFunctions"] + + [deps.ChangesOfVariables.extensions] + ChangesOfVariablesInverseFunctionsExt = "InverseFunctions" [[deps.ClimaAtmos]] deps = ["ArgParse", "ArtifactWrappers", "Artifacts", "AtmosphericProfilesLibrary", "CLIMAParameters", "CUDA", "ClimaComms", "ClimaCore", "ClimaTimeSteppers", "CloudMicrophysics", "Colors", "Dates", "Dierckx", "DiffEqBase", "DiffEqCallbacks", "Distributions", "DocStringExtensions", "FastGaussQuadrature", "ImageFiltering", "Insolation", "Interpolations", "IntervalSets", "JLD2", "LambertW", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "OrdinaryDiffEq", "Pkg", "Printf", "RRTMGP", "Random", "RootSolvers", "StaticArrays", "Statistics", "StatsBase", "SurfaceFluxes", "TerminalLoggers", "Test", "Thermodynamics", "YAML"] @@ -291,6 +328,10 @@ deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "Requires", "Statist git-tree-sha1 = "a1f44953f2382ebb937d60dafbe2deea4bd23249" uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" version = "0.10.0" +weakdeps = ["SpecialFunctions"] + + [deps.ColorVectorSpace.extensions] + SpecialFunctionsExt = "SpecialFunctions" [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] @@ -310,15 +351,19 @@ uuid = "bbf7d656-a473-5ed7-a52c-81e309532950" version = "0.3.0" [[deps.Compat]] -deps = ["Dates", "LinearAlgebra", "UUIDs"] +deps = ["UUIDs"] git-tree-sha1 = "e460f044ca8b99be31d35fe54fc33a5c33dd8ed7" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" version = "4.9.0" +weakdeps = ["Dates", "LinearAlgebra"] + + [deps.Compat.extensions] + CompatLinearAlgebraExt = "LinearAlgebra" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" -version = "1.0.1+0" +version = "1.0.5+0" [[deps.ComputationalResources]] git-tree-sha1 = "52cb3ec90e8a8bea0e62e275ba577ad0f74821f7" @@ -336,6 +381,11 @@ deps = ["LinearAlgebra"] git-tree-sha1 = "c53fc348ca4d40d7b371e71fd52251839080cbc9" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" version = "1.5.4" +weakdeps = ["IntervalSets", "StaticArrays"] + + [deps.ConstructionBase.extensions] + ConstructionBaseIntervalSetsExt = "IntervalSets" + ConstructionBaseStaticArraysExt = "StaticArrays" [[deps.Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -386,7 +436,9 @@ uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" [[deps.DelimitedFiles]] deps = ["Mmap"] +git-tree-sha1 = "9e2f36d3c96a820c678f2f1f1782582fcf685bae" uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab" +version = "1.9.1" [[deps.DensityInterface]] deps = ["InverseFunctions", "Test"] @@ -407,17 +459,43 @@ uuid = "cd4c43a9-7502-52ba-aa6d-59fb2a88580b" version = "0.1.0+0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] +deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] git-tree-sha1 = "dee066b8dce741815729f5973b6db757416948b7" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" version = "6.128.4" + [deps.DiffEqBase.extensions] + DiffEqBaseDistributionsExt = "Distributions" + DiffEqBaseGeneralizedGeneratedExt = "GeneralizedGenerated" + DiffEqBaseMPIExt = "MPI" + DiffEqBaseMeasurementsExt = "Measurements" + DiffEqBaseMonteCarloMeasurementsExt = "MonteCarloMeasurements" + DiffEqBaseReverseDiffExt = "ReverseDiff" + DiffEqBaseTrackerExt = "Tracker" + DiffEqBaseUnitfulExt = "Unitful" + DiffEqBaseZygoteExt = "Zygote" + + [deps.DiffEqBase.weakdeps] + Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f" + GeneralizedGenerated = "6b9d7cbe-bcb9-11e9-073f-15a7a543e2eb" + MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195" + Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" + MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" + Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" + Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" + [[deps.DiffEqCallbacks]] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] git-tree-sha1 = "9c7d3a84264d935f6981504388b202a770113faa" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" version = "2.29.1" + [deps.DiffEqCallbacks.weakdeps] + OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" + Sundials = "c3572dad-4567-51f8-b174-8c6c989267f4" + [[deps.DiffResults]] deps = ["StaticArraysCore"] git-tree-sha1 = "782dd5f4561f5d267313f23853baaaa4c52ea621" @@ -431,20 +509,29 @@ uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" version = "1.15.1" [[deps.Distances]] -deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] +deps = ["LinearAlgebra", "Statistics", "StatsAPI"] git-tree-sha1 = "b6def76ffad15143924a2199f72a5cd883a2e8a9" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" version = "0.10.9" +weakdeps = ["SparseArrays"] + + [deps.Distances.extensions] + DistancesSparseArraysExt = "SparseArrays" [[deps.Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] git-tree-sha1 = "938fe2981db009f531b6332e31c58e9584a2f9bd" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" version = "0.25.100" +weakdeps = ["ChainRulesCore", "DensityInterface"] + + [deps.Distributions.extensions] + DistributionsChainRulesCoreExt = "ChainRulesCore" + DistributionsDensityInterfaceExt = "DensityInterface" [[deps.DocStringExtensions]] deps = ["LibGit2"] @@ -473,6 +560,12 @@ git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237" uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" +[[deps.EpollShim_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "8e9441ee83492030ace98f9789a654a6d0b1f643" +uuid = "2702e6a9-849d-5ed8-8c21-79e8b8f9ee43" +version = "0.0.20230411+0" + [[deps.ExceptionUnwrapping]] deps = ["Test"] git-tree-sha1 = "e90caa41f5a86296e014e148ee061bd6c3edec96" @@ -559,17 +652,32 @@ version = "1.16.1" uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] -deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] +deps = ["LinearAlgebra", "Random"] git-tree-sha1 = "a20eaa3ad64254c61eeb5f230d9306e937405434" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" version = "1.6.1" +weakdeps = ["SparseArrays", "Statistics"] + + [deps.FillArrays.extensions] + FillArraysSparseArraysExt = "SparseArrays" + FillArraysStatisticsExt = "Statistics" [[deps.FiniteDiff]] -deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] +deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays"] git-tree-sha1 = "c6e4a1fbe73b31a3dea94b1da449503b8830c306" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" version = "2.21.1" + [deps.FiniteDiff.extensions] + FiniteDiffBandedMatricesExt = "BandedMatrices" + FiniteDiffBlockBandedMatricesExt = "BlockBandedMatrices" + FiniteDiffStaticArraysExt = "StaticArrays" + + [deps.FiniteDiff.weakdeps] + BandedMatrices = "aae01518-5342-5314-be14-df237901396f" + BlockBandedMatrices = "ffab5731-97b5-5995-9138-79e8c1846df0" + StaticArrays = "90137ffa-7385-5640-81b9-e52037218182" + [[deps.FixedPointNumbers]] deps = ["Statistics"] git-tree-sha1 = "335bfdceacc84c5cdf16aadc768aa5ddfc5383cc" @@ -589,10 +697,14 @@ uuid = "59287772-0a20-5a39-b81b-1366585eb4c0" version = "0.4.2" [[deps.ForwardDiff]] -deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"] +deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"] git-tree-sha1 = "cf0fe81336da9fb90944683b8c41984b08793dad" uuid = "f6369f11-7733-5829-9624-2563aa707210" version = "0.10.36" +weakdeps = ["StaticArrays"] + + [deps.ForwardDiff.extensions] + ForwardDiffStaticArraysExt = "StaticArrays" [[deps.FreeType2_jll]] deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Zlib_jll"] @@ -713,6 +825,10 @@ deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", git-tree-sha1 = "ec7df74b7b2022e8252a8bfd4ec23411491adc3b" uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f" version = "0.17.0" +weakdeps = ["MPI"] + + [deps.HDF5.extensions] + MPIExt = "MPI" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] @@ -795,10 +911,14 @@ uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59" version = "0.14.7" [[deps.IntervalSets]] -deps = ["Dates", "Random", "Statistics"] +deps = ["Dates", "Random"] git-tree-sha1 = "8e59ea773deee525c99a8018409f64f19fb719e6" uuid = "8197267c-284f-5f27-9208-e0e47529a953" version = "0.7.7" +weakdeps = ["Statistics"] + + [deps.IntervalSets.extensions] + IntervalSetsStatisticsExt = "Statistics" [[deps.InverseFunctions]] deps = ["Test"] @@ -864,6 +984,12 @@ git-tree-sha1 = "4c5875e4c228247e1c2b087669846941fb6e0118" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" version = "0.9.8" + [deps.KernelAbstractions.extensions] + EnzymeExt = "EnzymeCore" + + [deps.KernelAbstractions.weakdeps] + EnzymeCore = "f151be2c-9106-41f4-ab19-57ee4f262869" + [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] git-tree-sha1 = "17e462054b42dcdda73e9a9ba0c67754170c88ae" @@ -928,6 +1054,14 @@ git-tree-sha1 = "f428ae552340899a935973270b8d98e5a31c49fe" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" version = "0.16.1" + [deps.Latexify.extensions] + DataFramesExt = "DataFrames" + SymEngineExt = "SymEngine" + + [deps.Latexify.weakdeps] + DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" + SymEngine = "123dc426-2d89-5057-bbad-38513e3affd8" + [[deps.LayoutPointers]] deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"] git-tree-sha1 = "88b8f66b604da079a627b6fb2860d3704a6729a1" @@ -1027,7 +1161,7 @@ uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" version = "7.2.0" [[deps.LinearAlgebra]] -deps = ["Libdl", "libblastrampoline_jll"] +deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearOperators]] @@ -1042,11 +1176,35 @@ git-tree-sha1 = "69cbd612e6e67ba2f8121bc8725bc9d04d803599" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" version = "2.5.1" + [deps.LinearSolve.extensions] + LinearSolveCUDAExt = "CUDA" + LinearSolveHYPREExt = "HYPRE" + LinearSolveIterativeSolversExt = "IterativeSolvers" + LinearSolveKrylovKitExt = "KrylovKit" + LinearSolveMKLExt = "MKL_jll" + LinearSolveMetalExt = "Metal" + LinearSolvePardisoExt = "Pardiso" + + [deps.LinearSolve.weakdeps] + CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" + HYPRE = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771" + IterativeSolvers = "42fd0dbc-a981-5370-80f2-aaf504508153" + KrylovKit = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" + MKL_jll = "856f044c-d86e-5d09-b602-aeab76dc8ba7" + Metal = "dde4c033-4e86-420c-a63e-0dd931031962" + Pardiso = "46dd5b70-b6fb-5a00-ae2d-e8fea33afaf2" + [[deps.LogExpFunctions]] -deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] +deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"] git-tree-sha1 = "7d6dd4e9212aebaeed356de34ccf262a3cd415aa" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" version = "0.3.26" +weakdeps = ["ChainRulesCore", "ChangesOfVariables", "InverseFunctions"] + + [deps.LogExpFunctions.extensions] + LogExpFunctionsChainRulesCoreExt = "ChainRulesCore" + LogExpFunctionsChangesOfVariablesExt = "ChangesOfVariables" + LogExpFunctionsInverseFunctionsExt = "InverseFunctions" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -1058,10 +1216,15 @@ uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" version = "1.0.2" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "SpecialFunctions", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] +deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] git-tree-sha1 = "c88a4afe1703d731b1c4fdf4e3c7e77e3b176ea2" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" version = "0.12.165" +weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"] + + [deps.LoopVectorization.extensions] + ForwardDiffExt = ["ChainRulesCore", "ForwardDiff"] + SpecialFunctionsExt = "SpecialFunctions" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -1075,6 +1238,14 @@ git-tree-sha1 = "1ccbd6980b4ff1e1e411086d01696048e6013653" uuid = "da04e1cc-30fd-572f-bb4f-1f8673147195" version = "0.20.10" + [deps.MPI.extensions] + AMDGPUExt = "AMDGPU" + CUDAExt = "CUDA" + + [deps.MPI.weakdeps] + AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e" + CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" + [[deps.MPICH_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"] git-tree-sha1 = "8a5b4d2220377d1ece13f49438d71ad20cf1ba83" @@ -1122,7 +1293,7 @@ version = "1.1.7" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" -version = "2.28.0+0" +version = "2.28.2+0" [[deps.Measures]] git-tree-sha1 = "c13304c81eec1ed3af7fc20e75fb6b26092a1102" @@ -1152,7 +1323,7 @@ version = "0.3.4" [[deps.MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" -version = "2022.2.1" +version = "2022.10.11" [[deps.MuladdMacro]] git-tree-sha1 = "cac9cc5499c25554cba55cd3c30543cff5ca4fab" @@ -1232,7 +1403,7 @@ version = "0.3.17+0" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" -version = "0.3.20+0" +version = "0.3.21+4" [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] @@ -1283,7 +1454,7 @@ version = "6.55.0" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] uuid = "efcefdf7-47ab-520b-bdef-62a2eaa19f15" -version = "10.40.0+0" +version = "10.42.0+0" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] @@ -1292,10 +1463,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[deps.PackageExtensionCompat]] -deps = ["Requires", "TOML"] git-tree-sha1 = "f9b1e033c2b1205cf30fd119f4e50881316c1923" uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930" version = "1.0.1" +weakdeps = ["Requires", "TOML"] [[deps.PaddedViews]] deps = ["OffsetArrays"] @@ -1327,9 +1498,9 @@ uuid = "30392449-352a-5448-841d-b1acce4e97dc" version = "0.42.2+0" [[deps.Pkg]] -deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] +deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" -version = "1.8.0" +version = "1.9.2" [[deps.PkgVersion]] deps = ["Pkg"] @@ -1355,6 +1526,20 @@ git-tree-sha1 = "ccee59c6e48e6f2edf8a5b64dc817b6729f99eb5" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" version = "1.39.0" + [deps.Plots.extensions] + FileIOExt = "FileIO" + GeometryBasicsExt = "GeometryBasics" + IJuliaExt = "IJulia" + ImageInTerminalExt = "ImageInTerminal" + UnitfulExt = "Unitful" + + [deps.Plots.weakdeps] + FileIO = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" + GeometryBasics = "5c1252a2-5f33-56bf-86c9-59e7332b4326" + IJulia = "7073ff75-c697-5162-941a-fcdaad2a7d2a" + ImageInTerminal = "d8c32880-2388-543b-8c61-d9f865259254" + Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d" + [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] git-tree-sha1 = "d4c9ebdc6528a4aaf7cfcf43b482e927267b400d" @@ -1373,6 +1558,12 @@ git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" version = "0.4.12" + [deps.PreallocationTools.extensions] + PreallocationToolsReverseDiffExt = "ReverseDiff" + + [deps.PreallocationTools.weakdeps] + ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" + [[deps.PrecompileTools]] deps = ["Preferences"] git-tree-sha1 = "03b4c25b43cb84cee5c90aa9b5ea0a78fd848d2f" @@ -1460,6 +1651,10 @@ deps = ["Requires"] git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" version = "0.4.5" +weakdeps = ["FixedPointNumbers"] + + [deps.Ratios.extensions] + RatiosFixedPointNumbersExt = "FixedPointNumbers" [[deps.RecipesBase]] deps = ["PrecompileTools"] @@ -1479,6 +1674,18 @@ git-tree-sha1 = "d7087c013e8a496ff396bae843b1e16d9a30ede8" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" version = "2.38.10" + [deps.RecursiveArrayTools.extensions] + RecursiveArrayToolsMeasurementsExt = "Measurements" + RecursiveArrayToolsMonteCarloMeasurementsExt = "MonteCarloMeasurements" + RecursiveArrayToolsTrackerExt = "Tracker" + RecursiveArrayToolsZygoteExt = "Zygote" + + [deps.RecursiveArrayTools.weakdeps] + Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7" + MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca" + Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" + Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" + [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "PrecompileTools", "StrideArraysCore", "TriangularSolve"] git-tree-sha1 = "2b6d4a40339aa02655b1743f4cd7c03109f520c1" @@ -1547,6 +1754,12 @@ git-tree-sha1 = "6de099dba3c80e23bde1d19011161ea91a23ed6b" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" version = "1.98.0" + [deps.SciMLBase.extensions] + ZygoteExt = "Zygote" + + [deps.SciMLBase.weakdeps] + Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" + [[deps.SciMLNLSolve]] deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] git-tree-sha1 = "9dfc8e9e3d58c0c74f1a821c762b5349da13eccf" @@ -1595,6 +1808,12 @@ git-tree-sha1 = "20aa9831d654bab67ed561e78917047143ecb9bf" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" version = "0.1.19" + [deps.SimpleNonlinearSolve.extensions] + SimpleNonlinearSolveNNlibExt = "NNlib" + + [deps.SimpleNonlinearSolve.weakdeps] + NNlib = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" + [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" @@ -1622,7 +1841,7 @@ uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c" version = "1.1.1" [[deps.SparseArrays]] -deps = ["LinearAlgebra", "Random"] +deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] @@ -1631,6 +1850,16 @@ git-tree-sha1 = "42d131931906bf4f0af97a7113c8456d0a8aff9d" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" version = "2.6.0" + [deps.SparseDiffTools.extensions] + SparseDiffToolsEnzymeExt = "Enzyme" + SparseDiffToolsSymbolicsExt = "Symbolics" + SparseDiffToolsZygoteExt = "Zygote" + + [deps.SparseDiffTools.weakdeps] + Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" + Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" + Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" + [[deps.Sparspak]] deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] git-tree-sha1 = "342cf4b449c299d8d1ceaf00b7a49f4fbc7940e7" @@ -1638,10 +1867,14 @@ uuid = "e56a9233-b9d6-4f03-8d0f-1825330902ac" version = "0.3.9" [[deps.SpecialFunctions]] -deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] +deps = ["IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] git-tree-sha1 = "e2cfc4012a19088254b3950b85c3c1d8882d864d" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" version = "2.3.1" +weakdeps = ["ChainRulesCore"] + + [deps.SpecialFunctions.extensions] + SpecialFunctionsChainRulesCoreExt = "ChainRulesCore" [[deps.StackViews]] deps = ["OffsetArrays"] @@ -1660,12 +1893,21 @@ deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "PrecompileTools" git-tree-sha1 = "03fec6800a986d191f64f5c0996b59ed526eda25" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" version = "1.4.1" +weakdeps = ["OffsetArrays", "StaticArrays"] + + [deps.StaticArrayInterface.extensions] + StaticArrayInterfaceOffsetArraysExt = "OffsetArrays" + StaticArrayInterfaceStaticArraysExt = "StaticArrays" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] +deps = ["LinearAlgebra", "Random", "StaticArraysCore"] git-tree-sha1 = "51621cca8651d9e334a659443a74ce50a3b6dfab" uuid = "90137ffa-7385-5640-81b9-e52037218182" version = "1.6.3" +weakdeps = ["Statistics"] + + [deps.StaticArrays.extensions] + StaticArraysStatisticsExt = "Statistics" [[deps.StaticArraysCore]] git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d" @@ -1675,6 +1917,7 @@ version = "1.4.2" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" +version = "1.9.0" [[deps.StatsAPI]] deps = ["LinearAlgebra"] @@ -1689,10 +1932,15 @@ uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" version = "0.33.21" [[deps.StatsFuns]] -deps = ["ChainRulesCore", "HypergeometricFunctions", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] +deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] git-tree-sha1 = "f625d686d5a88bcd2b15cd81f18f98186fdc0c9a" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" +weakdeps = ["ChainRulesCore", "InverseFunctions"] + + [deps.StatsFuns.extensions] + StatsFunsChainRulesCoreExt = "ChainRulesCore" + StatsFunsInverseFunctionsExt = "InverseFunctions" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] @@ -1719,7 +1967,7 @@ uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" [[deps.SuiteSparse_jll]] deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" -version = "5.10.1+0" +version = "5.10.1+6" [[deps.SurfaceFluxes]] deps = ["DocStringExtensions", "KernelAbstractions", "RootSolvers", "StaticArrays", "Thermodynamics"] @@ -1736,7 +1984,7 @@ version = "0.2.2" [[deps.TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" -version = "1.0.0" +version = "1.0.3" [[deps.TableTraits]] deps = ["IteratorInterfaceExtensions"] @@ -1753,7 +2001,7 @@ version = "1.10.1" [[deps.Tar]] deps = ["ArgTools", "SHA"] uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e" -version = "1.10.1" +version = "1.10.0" [[deps.TaylorSeries]] deps = ["LinearAlgebra", "Markdown", "Requires", "SparseArrays"] @@ -1761,6 +2009,12 @@ git-tree-sha1 = "50718b4fc1ce20cecf28d85215028c78b4d875c2" uuid = "6aa5eb33-94cf-58f4-a9d0-e4b2c4fc25ea" version = "0.15.2" + [deps.TaylorSeries.extensions] + TaylorSeriesIAExt = "IntervalArithmetic" + + [deps.TaylorSeries.weakdeps] + IntervalArithmetic = "d1acc4aa-44c8-5952-acd4-ba5d80a2a253" + [[deps.TempestRemap_jll]] deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "Libdl", "NetCDF_jll", "OpenBLAS32_jll", "Pkg"] git-tree-sha1 = "88c3818a492ad1a94b1aa440b01eab5d133209ff" @@ -1864,10 +2118,15 @@ uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" [[deps.Unitful]] -deps = ["ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "Random"] +deps = ["Dates", "LinearAlgebra", "Random"] git-tree-sha1 = "a72d22c7e13fe2de562feda8645aa134712a87ee" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" version = "1.17.0" +weakdeps = ["ConstructionBase", "InverseFunctions"] + + [deps.Unitful.extensions] + ConstructionBaseUnitfulExt = "ConstructionBase" + InverseFunctionsUnitfulExt = "InverseFunctions" [[deps.UnitfulLatexify]] deps = ["LaTeXStrings", "Latexify", "Unitful"] @@ -1904,7 +2163,7 @@ uuid = "19fa3120-7c27-5ec5-8db8-b0b0aa330d6f" version = "0.2.0" [[deps.Wayland_jll]] -deps = ["Artifacts", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"] +deps = ["Artifacts", "EpollShim_jll", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"] git-tree-sha1 = "ed8d92d9774b077c53e1da50fd81a36af3744c1c" uuid = "a2964d1f-97da-50d4-b82a-358c7fce9d89" version = "1.21.0+0" @@ -2068,7 +2327,7 @@ version = "0.4.9" [[deps.Zlib_jll]] deps = ["Libdl"] uuid = "83775a58-1f1d-513f-b197-d71354ab007a" -version = "1.2.12+3" +version = "1.2.13+0" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -2101,9 +2360,9 @@ uuid = "0ac62f75-1d6f-5e53-bd7c-93b484bb37c0" version = "0.15.1+0" [[deps.libblastrampoline_jll]] -deps = ["Artifacts", "Libdl", "OpenBLAS_jll"] +deps = ["Artifacts", "Libdl"] uuid = "8e850b90-86db-534c-a0d3-1478176c7d93" -version = "5.1.1+0" +version = "5.8.0+0" [[deps.libfdk_aac_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]