diff --git a/configure.sh b/configure.sh
deleted file mode 100755
index 12c40ab..0000000
--- a/configure.sh
+++ /dev/null
@@ -1,111 +0,0 @@
-#!/bin/bash
-
-# Divider line
-line="########################################################################"
-version="0.0.3"
-
-echo
-echo $line
-echo "Pyralid Template Set Up Script"
-echo
-echo "Author: Samuel Farrens"
-echo "Year: 2020"
-echo "Version:" $version
-echo
-echo "See https://github.com/sfarrens/pyralid-template for help."
-echo
-echo $line
-echo
-echo "Please provide the following information:"
-
-read -p "> Your name: " _author_
-read -p "> Your email address: " _email_
-read -p "> Your GitHub user name: " _ghuser_
-read -p "> The current year [2020]: " _year_
-read -p "> Your package name: " _package_name_
-read -p "> A short description of your package: " _describe_
-read -p "> A list of packages your code requires (e.g. numpy,scipy,matplotlib): " _requires_
-
-
-_year_=${_year_:-"2020"}
-
-echo
-
-echo "The following files and directories will be updated with the package name '$_package_name_':"
-
-echo ./package_name
-grep -rl "configure_package_name" . --exclude=.git --exclude=configure.sh
-
-echo
-
-echo "and the package will be updated with the following details:"
-echo " - Your name: $_author_"
-echo " - Your email address: $_email_"
-echo " - Your GitHub user name: $_ghuser_"
-echo " - The current year: $_year_"
-echo " - A short description of your package: $_describe_"
-echo " - A list of packages your code requires: $_requires_"
-
-echo
-
-echo "Are you sure you want to make these changes?"
-
-read -p "> [y/N]: " _response_
-
-echo
-
-_response_=${_response_:-"n"}
-
-if [ "$_response_" != "Y"  ] && [ "$_response_" != "y"  ]; then
-  echo "Looks like you are not happy with that. Better start over!"
-  exit 1
-fi
-
-update_template() {
-  if [[ "$OSTYPE" == "darwin"* ]]; then
-    grep -rl $1 . --exclude=.git --exclude=configure.sh| xargs sed -i '' -e "s,$1,$2,g"
-  else
-    grep -rl $1 . --exclude=.git --exclude=configure.sh| xargs sed -i -e "s,$1,$2,g"
-  fi
-}
-
-update_requirements() {
-  for package in $(echo $_requires_ | sed "s/,/ /g")
-  do
-    echo $package >> requirements.txt
-  done
-}
-
-export LC_ALL=C
-mv ./package_name ./$_package_name_
-update_template "configure_package_name" "$_package_name_"
-update_template "configure_author" "$_author_"
-update_template "configure_email" "$_email_"
-update_template "configure_ghuser" "$_ghuser_"
-update_template "configure_year" "$_year_"
-update_template "configure_description" "$_describe_"
-update_requirements
-
-finish() {
-  echo "All done!"
-  exit 1
-}
-
-echo "Do you want the script to push these changes to GitHub for you?"
-read -p "> [y/N]: " _response2_
-
-echo
-
-_response2_=${_response2_:-"n"}
-
-if [ "$_response2_" != "Y"  ] && [ "$_response2_" != "y"  ]; then
-  finish
-fi
-
-echo "Commiting changes to template."
-
-git add .
-git commit -m "updated template"
-git push
-
-finish
diff --git a/cs_util/logging.py b/cs_util/logging.py
new file mode 100644
index 0000000..189cf62
--- /dev/null
+++ b/cs_util/logging.py
@@ -0,0 +1,62 @@
+"""LOGGING.
+
+:Description: This script contains utility methods for job execution and progress logging.
+
+:Author: Martin Kilbinger <martin.kilblinger@cea.fr>
+
+"""
+
+
+import sys
+
+
+def log_command(argv, name=None, close_no_return=True):
+    """Log Command.
+
+    Write command with arguments to a file or stdout.
+    Choose name = 'sys.stdout' or 'sys.stderr' for output on sceen.
+
+    MKDEBUG copied from shapepipe:cfis
+
+    Parameters
+    ----------
+    argv : list
+        Command line arguments
+    name : str
+        Output file name (default: 'log_<command>')
+    close_no_return : bool
+        If True (default), close log file. If False, keep log file open
+        and return file handler
+
+    Returns
+    -------
+    filehandler
+        log file handler (if close_no_return is False)
+
+    """
+    if name is None:
+        name = 'log_' + os.path.basename(argv[0])
+
+    if name == 'sys.stdout':
+        f = sys.stdout
+    elif name == 'sys.stderr':
+        f = sys.stderr
+    else:
+        f = open(name, 'w')
+
+    for a in argv:
+
+        # Quote argument if special characters
+        if '[' in a or ']' in a:
+            a = f'\"{a}\"'
+
+        print(a, end='', file=f)
+        print(' ', end='', file=f)
+
+    print('', file=f)
+
+    if not close_no_return:
+        return f
+
+    if name != 'sys.stdout' and name != 'sys.stderr':
+        f.close()
diff --git a/develop.txt b/develop.txt
index 592123c..03f912d 100644
--- a/develop.txt
+++ b/develop.txt
@@ -1,8 +1,8 @@
 coverage
-nose
+isort
+jinja2==3.0
+numpydoc
 pytest
 pytest-cov
-pytest-pep8
-pytest-emoji
-pytest-flake8
-wemake-python-styleguide
+pytest-pycodestyle
+pytest-pydocstyle
diff --git a/requirements.txt b/requirements.txt
index 90a862b..1fba4de 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,7 +1,7 @@
+astropy
+datetime
 importlib_metadata
 numpy
-astropy
 matplotlib
 pycodestyle==2.9.0
 vos
-datetime
diff --git a/setup.cfg b/setup.cfg
index 3c5c0bf..2c51224 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -22,9 +22,9 @@ testpaths =
   scripts
 addopts =
   --verbose
-  --emoji
-  --flake8
   --cov=cs_util
   --cov-report=term
   --cov-report=xml
   --junitxml=pytest.xml
+#--emoji
+#--flake8
diff --git a/setup.py b/setup.py
index c3635e6..9cc0b4f 100644
--- a/setup.py
+++ b/setup.py
@@ -7,7 +7,7 @@
 # Set the package release version
 major = 0
 minor = 0
-patch = 0
+patch = 1
 
 # Set the package details
 name = 'cs_util'