ci-dev.yml

name: CI

on:
  pull_request:
    branches:
     - develop

jobs:

  test-full:
    name: Full Test Suite
    runs-on: ${{ matrix.os }}

    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu-latest, macos-latest]
        python-version: [3.11]

    steps:
      - uses: actions/checkout@v4

      - name: Install Linux dependencies
        if: runner.os == 'Linux'
        run: sudo apt-get install libopenblas-dev

      - name: Install macOS Dependencies
        shell: bash -l {0}
        if: runner.os == 'macOS'
        run: |
          brew tap sfarrens/sf
          brew install bigmac libomp
          brew reinstall gcc

      - name: Set up conda
        uses: conda-incubator/setup-miniconda@v3
        with:
          auto-update-conda: true
          python-version: ${{ matrix.python-version }}
          auto-activate-base: true
          miniforge-version: latest

      - name: Install package
        shell: bash -l {0}
        run: |
          ./install_shapepipe --env-dev --develop

      - name: Run tests
        shell: bash -l {0}
        run: |
          conda activate shapepipe-dev
          pytest
          shapepipe_run -c example/config.ini