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Update bokeh to 0.12.6 #212

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There's a new version of bokeh available.
You are currently using 0.12.4. I have updated it to 0.12.6

These links might come in handy: PyPI | Changelog | Repo

Changelog

0.12.6

  • bugfixes:
    • 2136 Selections only work on the last of two series in one plot
    • 2680 Non-unit specs accept still allow units field
    • 3386 property.__delete__ does not send a change notification
    • 3564 [component: bokehjs] [widgets] Getting values of selected rows from a datatable after reordering with sort
    • 3838 Push_notebook doesn't seem to work display updated table content
    • 4294 [notebook] Replace table source
    • 4433 [layout] Gallery example issues
    • 4657 [regression] Adding an unwrapped widget to document, may not render properly
    • 4764 [component: server] [layout] Issue with interactions between widgets and plots using bokeh server
    • 4810 [component: server] [layout] Trouble swapping out layout contents when using server
    • 4829 [layout] Tabs only consisting of datatables not drawn correctly
    • 4872 [component: server] Arrows not updating from streaming data source
    • 5044 Shift selection in linked brushing plots
    • 5131 [layout] [widgets] Unexpected initial layout with datatable and layout()
    • 5198 Hovertool line_policy 'nearest' 'next' not working
    • 5207 [widgets] Need to resize window before datatable row labels show up
    • 5246 [component: tests] [regression] Py.test prints garbage when there is a syntax error in *.py files
    • 5499 [component: bokehjs] Datetimes on plot are always treated as local time and shifted to utc
    • 5518 [layout] Add new child to existing column
    • 5634 [component: docs] Fix documentation of 'bokeh html foo.py'
    • 5811 [component: bokehjs] Vbar width not updating correctly when too many things updated through push_notebook
    • 5856 [component: bokehjs] [layout] Plot becomes unresponsive when button widget is appended to layout
    • 5907 Hover inspection does not work for all glyphs
    • 5914 [component: bokehjs] Unable to right align tick labels
    • 5967 [layout] Unexpected behavior when deleting from layout.children
    • 6005 [component: bokehjs] Box select rendered incorrectly on bokehjs linked example
    • 6035 Na values correctly skipped in linear scale but not in log scale
    • 6047 [component: docs] User_guide/embed.rst still references collections
    • 6080 [component: server] Prefix bug on "active bokeh applications" page
    • 6085 [component: bokehjs] Hover tooltips update impossible
    • 6091 [layout] Sizing_mode breaks gmap alignment
    • 6095 imageurl.{w,h} use data units by default
    • 6104 [component: build] Twine upload in build/upload release script incorrect
    • 6105 [component: build] Setup.py auto-generates a bad empty string classifier
    • 6108 [component: bokehjs] [component: tests] Error using datarange1d with auto start/end and datetimeaxis
    • 6111 [component: docs] Fix typo in selection documentation
    • 6115 [component: bokehjs] [widgets] Descending order with tablecolumn still ascending
    • 6120 [component: bokehjs] Hover responds to hidden data when legend.click_policy = 'hide'
    • 6123 [component: bokehjs] [regression] [widgets] Rangeslider bug
    • 6124 [component: bokehjs] Update core/dom.ts to work with upcoming typescript 2.3.0
    • 6127 [component: bokehjs] [regression] Issue upgrading from bokeh 0.12.4 to 0.12.5 with ie 11
    • 6130 [component: bokehjs] Multiline hit_test fails if line_width property utilized
    • 6142 [component: bokehjs] [regression] Regression in legend positioning
    • 6152 [component: bokehjs] [component: server] Bokeh server is incompatible with tornado=4.5
    • 6156 [component: build] [component: docs] Optimized python execution fails due to missing doc instantiation
    • 6199 [component: server] Client.coffee sets binary type incorrectly
    • 6205 [component: tests] Typescript 2.3.0 breaks customjs tests
    • 6207 [component: bokehjs] [regression] [widgets] Htmltemplateformatter still uses underscore
    • 6208 [component: bokehjs] [regression] Possible to use gesture tools after disabling in toolbar
    • 6210 [component: bokehjs] [regression] Bokehjs doesn't work in notebook
    • 6212 [regression] Issue with test build 0.12.6dev3 on windows 7 with ie11
    • 6213 [component: bokehjs] [layout] [regression] Appending layout regression
    • 6226 [component: bokehjs] [component: build] Update coffee-script's version to 0.12.5+
    • 6238 [component: bokehjs] Mousewheel event: delta=none at all times
    • 6244 [component: build] Fails to build in windows 7
    • 6248 [API: plotting] [regression] Gmap not configuring mercator tick formatter
    • 6252 [component: examples] Embed multiple sample data mismatch length
    • 6261 [component: bokehjs] [layout] [regression] Adding new sub-layouts fails to set documemt
    • 6263 [regression] Plot validation doesn't happen for non-application layouts
    • 6301 Yahoo ichart api is failing, should use stock data from bokeh.sampledata.stocks
    • 6311 [regression] Spectrogram performance regression
    • 6316 Bug in screendistancespec serialization
    • 6319 [component: server] Bokeh server does not close http sockets
    • 6328 [component: bokehjs] [notebook] Gmap in notebook unreliable again
    • 6343 [component: examples] Scale/range incompatibility in examples/models/server/population.py
    • 6365 [component: bokehjs] [regression] Imagergba error during change events
    • 6366 Webgl isn't correctly deprecated bokeh 0.12.6dev7
    • 6388 [component: bokehjs] [regression] Selection tool regression
    • 6391 [component: build] Bokehjs' build uses gulp 3.x but types/gulp 4.x
    • 6393 [regression] Modifying datasources broken
    • 6397 [component: server] More explicit match cases
    • 6398 [regression] [webgl] All webgl examples fail
    • 6400 [component: bokehjs] [regression] Line_select.py example broken
    • 6402 [widgets] Disabled button raises button click protocol event
    • 6411 [regression] Matches() is broken when pandas is not installed
    • 6416 [component: bokehjs] [regression] Hovertool broken with multi_line plots in 0.12.5
    • 6433 [component: bokehjs] [regression] Selecting a line from a multi-line when one is already selected causes an error
    • 6443 Svg images are incorrectly smoothed
    • 6449 [component: bokehjs] [notebook] Protect against exceptions when running inline code
  • features:
    • 538 Headless static (svg, png) image generation
    • 1239 Hover.tooltip convenience function for 'datetime' info
    • 1482 [starter] Datarange1d.rangepadding should allow "fixed" values
    • 1671 [starter] Allow users to specify explicit tick labels
    • 2352 Feature request: error bar plots
    • 5430 [component: docs] [enh] help widget tuned for end user
    • 5599 [component: bokehjs] Feature: hover tool inspector default
    • 5831 Numberspec coordinates should accept datetimes
    • 5885 [notebook] Support embed bokeh into apache zeppelin
    • 6044 "columns must be of the same length" warning does not show context
    • 6064 [component: bokehjs] Remove the hover menu item, and keep the hover function working
    • 6081 Feature request: add support for user-defined custom mappers
    • 6161 [component: bokehjs] Extend hit testing and hover support to segment
    • 6186 Themes not applied in file_html
    • 6285 [component: bokehjs] Extend patching to sub-items
    • 6286 [component: bokehjs] [widgets] Enabling/ disabling re-ordering of columns in datatable (freezing columns in place)
  • tasks:
    • 1833 Make get_version consistent between pip-intalled and conda-intalled devel builds
    • 2595 [component: docs] Update hovertool's documentation with field formatting, etc
    • 2984 [component: docs] Update sphinx version to fix documentation parsing issues for google style docstrings
    • 3016 [component: docs] Axis location must be set on creation (documentation fix)
    • 3656 [component: docs] Docs on widgets & interactions should link to the callbacks & events section
    • 4153 [component: bokehjs] Strict trigger() and listento()
    • 4449 [component: bokehjs] Ensure canvas state reset at start of drawing
    • 4948 [starter] Plot title ignores sizing and appears italicized if number is provided but no units are specified
    • 5007 [component: examples] [starter] Update unemployment examples
    • 5268 [component: bokehjs] Improve mappers' inheritance structure
    • 5694 [component: bokehjs] [component: tests] Report code coverage for bokehjs unit tests
    • 5819 [component: docs] Why i can't use operurl in widget callback (e.g. button callback)?
    • 5854 [component: bokehjs] Enable typescript's strictnullchecks
    • 5879 [component: examples] [component: tests] Make "bokeh finished rendering heuristic" work with non-plot examples
    • 5950 [component: docs] Expose all json representations in one place
    • 5951 [component: docs] Sphinxext.bokeh_plot broken
    • 6040 [component: docs] Callback.rst documentation incomplete
    • 6079 [component: docs] Clarify docs for hovertool
    • 6088 [component: examples] Fixing up examples/models/file/
    • 6102 [component: build] Have deploy script use github api token to avoid rate-limiting issues
    • 6113 [component: build] Pypi release includes scripts?
    • 6125 [component: bokehjs] Use nounusedlocals to discover unused imports, etc
    • 6129 [component: docs] Fix typo in issue_template.md
    • 6139 [component: bokehjs] [component: build] Use tslib to reduce size of bokehjs
    • 6145 Update obsolete output examples in bokeh.embed docs
    • 6158 [component: docs] For interactive legends, a note about muted_color would be helpful
    • 6164 Remove deprecations up to 0.12.3
    • 6184 [component: docs] Bokeh-api documentation improvement suggestions
    • 6188 [component: docs] Missing docstring description of state arg in bokeh.io.save
    • 6191 Fix deprecated datetime64 use for np_epoch
    • 6197 [component: bokehjs] Remove confusing aliases from layoutcanvas
    • 6228 [component: docs] Task: add missing packaging dependency to documentation requirements
    • 6242 [component: bokehjs] Task: remove computed properties implementation
    • 6245 Html title is not escaped
    • 6247 [component: bokehjs] [component: tests] Allow to write bokehjs unit tests in typescript
    • 6251 [component: bokehjs] [component: build] Allow to write bokehjs build files in typescript
    • 6254 Revert "deprecate x/y_mapper_type plot kwargs in place of first-class scale models"
    • 6267 [component: bokehjs] [component: tests] Merge tests/common into tests/core
    • 6269 [component: docs] Bokeh-github directive should not check urls by default
    • 6274 Futurewarning from pandas in bokehjsonencoder
    • 6287 [component: bokehjs] Add migration note for removal of document.resize()
    • 6295 [component: build] Update manifest.in
    • 6309 [component: server] Report tornado version on bokeh server startup
    • 6317 Deprecationwarnings on python 3.6
    • 6323 Add bkcharts shim and dependency
    • 6325 Downstream url for dynamic_map.py has ssl issue
    • 6326 [component: bokehjs] Passing renderer object in cb_data on hovertool customjs callback
    • 6331 [component: docs] Re-building docs - keyerror gallery exception
    • 6336 [component: bokehjs] Silence all change signals during initialization of models
    • 6338 [component: server] Feature request: configurable maximum upload size for tornado server
    • 6385 [component: bokehjs] Rely on request_render and fix up cs code
    • 6387 [component: docs] Fixed typos in setup doc
    • 6408 [component: docs] [component: examples] General 0.12.6 examples and docs tasks
    • 6419 [component: bokehjs] Restore events for "patch", "stream" and "do"
    • 6445 Bump required bkcharts version to 0.2

0.12.5

  • bugfixes:
    • 2058 [component: bokehjs] Point hit testing for rects broken with screen space widths
    • 2288 [API: charts] Handle nan as input to bar()
    • 2822 [component: bokehjs] [geo] [starter] Gmapplot resets to (0, 0)
    • 2964 [component: bokehjs] Gmap alignment still off in 0.10
    • 3461 [component: server] Notebook + server not working
    • 3737 [regression] Gmapplot doesn't display anything in jupyter v.4
    • 4135 [component: bokehjs] [component: build] Don't expose external typings beyond bokeh namespace
    • 4539 [component: tests] Js tests reporting as failed even when they all passed
    • 4667 [component: bokehjs] Arrow and line_width
    • 4722 [notebook] Curdoc().theme = theme(json=yaml.load()) is not applied to charts when used in jupyter notebook
    • 4835 Multiple gmap plots whiting out in notebook.
    • 4875 [component: bokehjs] Graph 'running off'
    • 4952 Theme doesn't apply when using components
    • 4979 [component: bokehjs] [component: server] Cannot add renderers within a callback
    • 5063 [component: tests] Bokehjs tests are failing on regular basis
    • 5152 [component: examples] Wrong data shown in gapminder example app / slider update failing
    • 5185 [layout] [starter] Reset tool fails when figure passed width instead of plot_width, etc.
    • 5336 [component: bokehjs] Strange behaviour of rect-glyph
    • 5353 [component: bokehjs] Extensions do not render when using bokeh.embed.components / bokeh.embed.file_html apis
    • 5416 [component: bokehjs] Multiple model sync in one callback can fail
    • 5488 [component: bokehjs] [starter] Hide annotations via callback
    • 5582 [component: server] --num-procs x and curdoc().session_context.request.arguments don't go well together
    • 5629 [component: server] [starter] Bokeh server reports "none" port when there is a port conflict.
    • 5644 Hasprops.apply_theme does not work on container values
    • 5670 [component: tests] Integration test reports are garbled
    • 5695 [component: docs] Typo in palettes docs
    • 5700 [component: bokehjs] Safe-tag-fix
    • 5706 [API: plotting] Bokeh 0.12.4: columndatasource does not work anymore with bokeh.plotting.image
    • 5720 [component: bokehjs] [component: tests] [regression] It's not possible to debug tests anymore since 5659
    • 5731 [component: tests] Tests broken again, this time due to attributeerror
    • 5732 [component: bokehjs] [widgets] Datatable not wired up to respond to streaming patching
    • 5742 [component: examples] Missing template in flask_embed.py and tornado_embed.py
    • 5778 [component: bokehjs] [regression] Autoload_static uses jquery .data()
    • 5789 [component: tests] Some integration tests fail when run with python 2.7
    • 5818 [component: build] Conda convert windows packages cause an error
    • 5848 [component: server] Memory leak in bokeh application
    • 5861 [component: bokehjs] [regression] Instance of figure class in bokehjs does not have reference to xaxis and yaxis
    • 5887 [component: docs] Transform docstring ends abruptly
    • 5888 [component: tests] [regression] Tests/examples/examples_report_plugin.py assumes clone has a remote named origin
    • 5891 [component: docs] Dev_guide/server.html has broken link to user_guide/server.html
    • 5900 [component: bokehjs] Attempt to make layout less fragile
    • 5905 Embed components performance
    • 5910 [component: build] All ci jobs failing due to some change affecting js compilation
    • 5916 Cannot import from .ts in a custom extension
    • 5921 [component: bokehjs] Fix for small bug in array intersection method
    • 5936 [component: bokehjs] [component: build] Bokehjs builds are broken because of dependency update
    • 5954 [component: bokehjs] [regression] Latex label example is broken in dev docs
    • 5956 [component: docs] [regression] Sphinxext.bokeh_plot missing linenos option implementation
    • 5959 [layout] [regression] Notebook comms "basic usage.ipynb" broken
    • 5963 [component: bokehjs] [regression] Js error on callback
    • 5977 Themes aren't applied to document when using save
    • 5986 [component: bokehjs] Bug with firefox hover tool coordinates
    • 6006 Toolbar tooltips are blank in examples/app/crossfilter
    • 6012 Importing bokeh.models creates zombie process
    • 6014 [component: build] [regression] Sdists prompting for bokehjs build will block pip installs
    • 6015 [component: bokehjs] Fixed bug in model._process_event method
    • 6018 [regression] Hover tool broken due to undefined roundingfunction
    • 6023 [component: server] Accept server connections from any origin
    • 6030 Boxzoomtool and boxselecttool doesn't clear the overlay when end event is off the plot frame
    • 6032 [component: bokehjs] [regression] Multiple selections via shift+select don't work
    • 6037 [notebook] [regression] Repeatedly displaying a plot degrades performance
    • 6045 [component: examples] Fixed hover on gapminder to display country
    • 6051 [component: bokehjs] [regression] Middle and bottom plot won't pan in y-dimension in custom/gears/gears.py demo on firefox
    • 6054 Issues with examples/plotting/server/animated.py
    • 6059 [component: server] Python event callback not called if no js event callback is registered
    • 6063 [component: docs] Fixed href
    • 6069 [component: docs] Fixed broken link to gapminder example
    • 6075 Resettool does not trigger change events on range1d
    • 6100 Correct cursor handling
  • features:
    • 2274 [component: bokehjs] Interactive legends
    • 2414 [starter] Use [non]selection_glyph="auto" to generate automatically, not none
    • 3715 Interactively hide or show lines after plot finished by clicking (without re-ploting like plot browser feature in matlab)
    • 3748 [component: bokehjs] [component: server] Trigger python event when level_of_detail mode finishes
    • 4241 [component: docs] [starter] Create a custom 404 page for bokeh docs
    • 4694 [component: bokehjs] [starter] Angle of glyphs in legend doesn't match glyphs in plot
    • 4927 [component: bokehjs] [starter] Event handler for width/height change of plot
    • 5015 [component: bokehjs] [starter] Customjstransform
    • 5278 [component: bokehjs] [component: server] Feature: emitting tool and ui events and attaching callbacks
    • 5442 [component: bokehjs] [starter] Add scale control to gmaps
    • 5592 [component: bokehjs] [geo] [starter] Gmapoptions are not dynamically applied
    • 5692 [component: server] make it possible to use relative urls
    • 5973 Cds creation from dataframes should not use tolist()
    • 6043 Avoid isinstance checks in _visit_value_and_its_immediate_references
    • 6055 Use math library instead of numpy for nan/inf checks
  • tasks:
    • 2933 [component: bokehjs] Use only div and canvas in the generated html
    • 2940 Gmapplot coordinate axes
    • 3210 [component: bokehjs] [component: server] [widgets] Improvements to events
    • 3270 [API: charts] General charts examples improvements
    • 4111 [component: bokehjs] [component: tests] [regression] Check js logs in tests
    • 4285 [component: tests] Testing infrastructure bug/wish list
    • 4321 [component: bokehjs] [webgl] Put webgl functionality in separate bokeh-gl.js?
    • 4854 Code of conduct needed
    • 5060 Limit imports of client/server code to only when necessary
    • 5102 [component: bokehjs] Hovertool tooltip css is vunerable to being overridden by other page css
    • 5121 [component: bokehjs] [component: tests] Fix skipped js tests as result of getter/setter work
    • 5174 [component: bokehjs] [starter] Task: support updating computed transforms fields if dependencies change
    • 5209 [component: build] Stop building noarch conda packages
    • 5232 [component: tests] Intermittently failing examples tests - ggplot_density and graphs
    • 5238 [component: build] [component: docs] Help make examples more visible and easy to use
    • 5254 [component: bokehjs] [component: examples] [component: tests] Examples involving transforms using math.random() fail image diff
    • 5495 [component: docs] [component: server] Document non-script and programmatic use
    • 5541 [component: build] Label image diff results "expected" vs "actual"
    • 5613 [component: build] Windows setup.py build from source and versioneer
    • 5625 [component: bokehjs] Drop jquery from core bokehjs
    • 5638 [component: docs] Examples / charts/ readme states incorrect location for jupyter notebook example code
    • 5640 [component: examples] New app example: exploding pivot charts
    • 5647 [API: charts] Make the default hover tooltip work for donut charts
    • 5664 Remove old deprecations
    • 5666 [py3] Python 3.6 compatibility
    • 5677 Permission denied error when invoking show() from inside jupyter notebook
    • 5679 [component: build] Deploy script should automatically create and upload examples tarballs
    • 5691 [component: docs] Fix a typo in layoutdom
    • 5699 [component: examples] Not necessary loop in weather example?
    • 5704 Move abstract out of properties.py
    • 5705 [notebook] Print bokeh version in notebook "bokehjs loaded" message
    • 5710 [API: models] Deprecate bokeh.models.layouts hbox and vbox
    • 5712 [component: tests] Make sure examples' tests wait until bokeh finished rendering
    • 5718 [component: docs] Bad formatting in selected docstring
    • 5726 [component: bokehjs] Tooltip font color can be turned white by outside css because it's not specified by bokeh
    • 5729 [component: bokehjs] Use only what we need from underscore
    • 5748 [component: tests] Bokehjs/examples/electron/node_modules interfere with code quality tests
    • 5754 Revert "clean up and refactor build"
    • 5756 Revert "bryanv/refactor build"
    • 5757 [component: bokehjs] [component: build] Remove bokehjs/src/vendor/kiwi and use bokeh/kiwi
    • 5759 [component: docs] Typo in axes docs
    • 5770 [component: build] Bryanv/build fixups
    • 5771 [component: build] Break up conda operations to prevent timeout
    • 5772 [component: build] Need to call chdir for persistent effect
    • 5773 [component: build] Fix path for css upload
    • 5775 [component: build] Try token with repr, add some diagnostics
    • 5776 [component: build] Globs don't work in subprocesses w/o shell=true
    • 5777 [component: build] Correctly implement put
    • 5787 [component: build] Pin mpl < 2.0
    • 5788 [component: docs] Migration notes and exceptions about mpl compat.
    • 5793 Bokeh calls logging.basicconfig()
    • 5796 [component: docs] Bokeh 0.12.4 needs python 3.3 but this isn't documented anywhere
    • 5799 Revert "fix rect rendering with log axis"
    • 5810 [component: bokehjs] Don't rely on typedarray.map
    • 5822 Hovertool for last value of a line plot sticks on second last value (works fine with circles)
    • 5826 [API: models] Add bokeh.plotting.gmap to create gmapplot correctly and easily
    • 5827 [component: build] Restore pip installable dev builds
    • 5834 [component: docs] Need to use different sintaxis when using command "bokeh serve" in windows command line
    • 5835 [component: examples] County data: most independent cities in virginia have 'city' left out, which causes confusion when trying to match based on county name
    • 5858 [component: docs] Update install.rst documentation
    • 5871 [API: models] Columndatasource constructor slow
    • 5878 [component: examples] Move models' file examples and add migration notes
    • 5880 [component: tests] Flake8 everything
    • 5882 [component: bokehjs] [component: examples] [component: tests] Test bokehjs/examples and run them on travis ci
    • 5895 [component: docs] Give feedback on bokeh server docs
    • 5896 [component: docs] Typo corrections and clarifications for user_guide/server (5895)
    • 5902 [component: docs] Typo (missing comma) in example code for labels
    • 5915 [component: examples] Including the color option in the embed simple example
    • 5928 [component: tests] Test_api_crawler assumes it is run in the source directory
    • 5930 [component: bokehjs] Align bokehjs' imports with custom models
    • 5934 [component: bokehjs] Enable typescripts' noimplicitany
    • 5946 [component: build] [component: tests] Disable saucelabs tests for now
    • 5947 [component: build] [component: tests] Re-enable saucelabs tests
    • 5965 [component: bokehjs] Legend should have pointer cursor only when click_policy != &quot;none&quot;
    • 5969 Tweak defaults for interactive legend inactive labels
    • 5989 Remove deprecated output_server
    • 5998 [component: build] Update docs upload to work now that host site is behind cloudflare
    • 6010 Revert "deprecate mpl compat"
    • 6016 [component: examples] Sprint prints nan for seleted names set to none
    • 6024 [component: bokehjs] Use throw new error(...) instead of throw error(...)
    • 6036 [component: examples] Updating embed examples
    • 6039 [component: examples] When embedding with autoload into a page with a different public url need relative_urls=false
    • 6048 [component: docs] Leveraging other libraries should include datashader
    • 6058 [component: examples] Added a tiler with a valid url for second plot in plotting/file/airport_map
    • 6066 Change default for
    • 6071 [component: examples] Update element names and symbols in elements.csv

Got merge conflicts? Close this PR and delete the branch. I'll create a new PR for you.

Happy merging! 🤖

@pyup-bot pyup-bot mentioned this pull request Jun 13, 2017
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