diff --git a/README.md b/README.md index 045f278..b28b5be 100644 --- a/README.md +++ b/README.md @@ -129,16 +129,14 @@ results = model.predict_from_video(video_path = "sample_data/videos/embryo_timel plot = model.create_population_plot_from_video(video_path = "sample_data/videos/embryo_timelapse.mov", save_plot= True, plot_name= "plot.png", ignore_last_n_frames= 0 ) plot.show() ``` + ## Links to Datasets -* **Segmenting the C. elegans embryo** - * The dataset was sourced from [3DMMS](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-2720-x#Abs1/). -* **Generating synthetic images of embryos with a Pre-trained GAN** - * The GAN was primarily trained on images from [EPIC dataset](https://epic.gs.washington.edu/). -* **Predicting populations of cells within the C. elegans embryo** - * The model was trained on videos sourced from the [EPIC dataset](http://epic.gs.washington.edu/). - -## Contact us -### Authors/maintainers: +| **Model** | **Data source** | +|-------------------------------------------------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------| +| Segmenting the C. elegans embryo | [3DMMS: robust 3D Membrane Morphological Segmentation of C. elegans embryo](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-2720-x#Abs1/) | +| Cell lineage population prediction + embryo GAN | [EPIC dataset](https://epic.gs.washington.edu/) + +## Authors/maintainers: * [Mayukh Deb](https://twitter.com/mayukh091) * [Ujjwal Singh](https://twitter.com/ujjjwalll) * [Dr. Bradly Alicea](https://twitter.com/balicea1)