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CHANGELOG.md

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CHANGELOG

v1.2.2

Enhancements:

  • Added more demo notebooks
  • Support for newer versions of certain Python dependencies (ipykernel, notebook, pyzmq and tornado)
  • realtimePlot (aka runtimePlot) is also available for multiController. However, this is available only when shareAxes is False or when the realtimePlot is the first view to be plotted. Other cases cannot be supported at the moment.
  • Added possibility to use the graphical keywords (xlab, ylab, fontsize, legend_loc, legend_fontsize, choose_xrange, choose_yrange) on all commands.
  • Added analysis to Variance suppression notebook

v1.1.2

Enhancements:

  • Various documentation improvements
  • Added another demo notebook
  • Show id of Figure objects in field views
  • Added possibility to have initial state >1 for integrate() and bifurcation() For multiagent() and SSA() the widgets are still limited to the sum of 1
  • Replace latex2sympy's process_sympy with sympy's parse_latex
  • Update docs to state Python >=3.6 required
  • Refactor MuMoT into separate modules this sets the length of time over which streams are integrated
  • numPoints added as keyword to 3D stream plot to set number of streams plotted
  • 3D stream plot now plots streams from random subset of starting points
  • 3D stream plot shading now based on velocity (calculated from line segment length)
  • 1D stream added
  • 3D stream added

Bug fixes:

  • Guard against iopub rate limiting warnings
  • Increase nbval cell exec timeout
  • Suppress matplotlib deprecation warning in nested multicontrollers
  • Sum to 1 for all views; implement warnings correctly
  • Patched issue for 1D models
  • Patched issue with multiController
  • Fixed exceptions for stochastic analysis methods
  • Fixed widgets for rates with equation
  • Patched SSA bug

v1.0.0

  • First release