From 72e9c3407338a4f5bc83bb4bb73ea8075664fa94 Mon Sep 17 00:00:00 2001 From: iamvigneshwars Date: Tue, 19 Mar 2024 11:15:48 +0000 Subject: [PATCH] Datasets service initial structure --- .devcontainer/Dockerfile | 3 + .devcontainer/devcontainer.json | 23 + .devcontainer/docker-compose.yml | 33 + .devcontainer/opa.yml | 14 + .dockerignore | 19 + .github/dependabot.yml | 16 + .github/workflows/code.yml | 104 + .github/workflows/container.yml | 63 + .github/workflows/devcontainer.yml | 23 + .gitignore | 5 + .vscode/settings.json | 18 + Cargo.lock | 3700 ++++++++++++++++++++++++++++ Cargo.toml | 10 + Dockerfile | 27 + LICENSE | 176 ++ README.md | 3 + 16 files changed, 4237 insertions(+) create mode 100644 .devcontainer/Dockerfile create mode 100644 .devcontainer/devcontainer.json create mode 100644 .devcontainer/docker-compose.yml create mode 100644 .devcontainer/opa.yml create mode 100644 .dockerignore create mode 100644 .github/dependabot.yml create mode 100644 .github/workflows/code.yml create mode 100644 .github/workflows/container.yml create mode 100644 .github/workflows/devcontainer.yml create mode 100644 .gitignore create mode 100644 .vscode/settings.json create mode 100644 Cargo.lock create mode 100644 Cargo.toml create mode 100644 Dockerfile create mode 100644 LICENSE create mode 100644 README.md diff --git a/.devcontainer/Dockerfile b/.devcontainer/Dockerfile new file mode 100644 index 0000000..c5dfd36 --- /dev/null +++ b/.devcontainer/Dockerfile @@ -0,0 +1,3 @@ +FROM docker.io/library/rust:1.76.0 + +RUN rustup component add rustfmt clippy diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json new file mode 100644 index 0000000..f7c1718 --- /dev/null +++ b/.devcontainer/devcontainer.json @@ -0,0 +1,23 @@ +{ + "name": "Datasets", + "dockerComposeFile": "docker-compose.yml", + "service": "datasets", + "customizations": { + "vscode": { + "extensions": [ + "ms-kubernetes-tools.vscode-kubernetes-tools", + "rust-lang.rust-analyzer", + "tamasfe.even-better-toml", + "tsandall.opa", + "mtxr.sqltools-driver-mysql" + ] + } + }, + "features": { + "ghcr.io/devcontainers/features/common-utils:2.4.2": { + "username": "none", + "upgradePackages": false + } + }, + "workspaceFolder": "/workspace" + } \ No newline at end of file diff --git a/.devcontainer/docker-compose.yml b/.devcontainer/docker-compose.yml new file mode 100644 index 0000000..de259bc --- /dev/null +++ b/.devcontainer/docker-compose.yml @@ -0,0 +1,33 @@ +version: "3.8" + +services: + datasets: + build: + context: . + dockerfile: Dockerfile + volumes: + - ..:/workspace:cached,z + command: sleep infinity + environment: + DATABASE_URL: mysql://root:rootpassword@ispyb/ispyb_build + LOG_LEVEL: DEBUG + + opa: + image: docker.io/openpolicyagent/opa:0.59.0 + restart: unless-stopped + command: > + run + --server + --config-file /config.yml + --watch + /policy + volumes: + - ./opa.yml:/config.yml:cached,z + - ../policy/:/policy:cached,z + env_file: opa.env + + ispyb: + image: ghcr.io/diamondlightsource/ispyb-database:v3.0.0 + restart: unless-stopped + environment: + MARIADB_ROOT_PASSWORD: rootpassword diff --git a/.devcontainer/opa.yml b/.devcontainer/opa.yml new file mode 100644 index 0000000..6df268d --- /dev/null +++ b/.devcontainer/opa.yml @@ -0,0 +1,14 @@ +services: + bundler: + url: http://authz.diamond.ac.uk + credentials: + bearer: + token: ${BUNDLER_TOKEN} + +bundles: + permissionables: + service: bundler + resource: bundle.tar.gz + polling: + min_delay_seconds: 10 + max_delay_seconds: 60 diff --git a/.dockerignore b/.dockerignore new file mode 100644 index 0000000..878943f --- /dev/null +++ b/.dockerignore @@ -0,0 +1,19 @@ +# Developer Tooling +.devcontainer +.github + +# Version Control +.git + +# Container Files +Dockerfile +.dockerignore + +# OPA Policy +org-policy/ + +# Build Artifacts +target/ + +# Supplimentary Files +LICENSE diff --git a/.github/dependabot.yml b/.github/dependabot.yml new file mode 100644 index 0000000..1556031 --- /dev/null +++ b/.github/dependabot.yml @@ -0,0 +1,16 @@ +version: 2 +updates: + - package-ecosystem: github-actions + directory: / + schedule: + interval: weekly + + - package-ecosystem: devcontainers + directory: "/" + schedule: + interval: weekly + + - package-ecosystem: cargo + directory: / + schedule: + interval: weekly diff --git a/.github/workflows/code.yml b/.github/workflows/code.yml new file mode 100644 index 0000000..b6edbd5 --- /dev/null +++ b/.github/workflows/code.yml @@ -0,0 +1,104 @@ +name: Backend Code + +on: + push: + pull_request: + +jobs: + lint: + # Deduplicate jobs from pull requests and branch pushes within the same repo. + if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository + runs-on: ubuntu-latest + services: + ispyb: + image: ghcr.io/diamondlightsource/ispyb-database:v3.0.0 + ports: + - 3306:3306 + env: + MARIADB_ROOT_PASSWORD: rootpassword + options: > + --health-cmd "/usr/local/bin/healthcheck.sh --defaults-file=/ispyb/.my.cnf --connect" + env: + DATABASE_URL: mysql://root:rootpassword@localhost/ispyb_build + steps: + - name: Checkout source + uses: actions/checkout@v4.1.1 + + - name: Install dependencies + uses: awalsh128/cache-apt-pkgs-action@v1.4.2 + with: + packages: libopencv-dev clang libclang-dev + + - name: Install stable toolchain + uses: actions-rs/toolchain@v1.0.7 + with: + toolchain: stable + default: true + + - name: Cache Rust Build + uses: Swatinem/rust-cache@v2.7.3 + + - name: Create models lib file + run: | + mkdir models/src + printf "\n" > models/src/lib.rs + + - name: Check Formatting + uses: actions-rs/cargo@v1.0.3 + with: + command: fmt + args: > + --all + --check + + - name: Lint with Clippy + uses: actions-rs/cargo@v1.0.3 + with: + command: clippy + args: > + --no-deps + --all-targets + --all-features + -- + --deny warnings + + test: + # Deduplicate jobs from pull requests and branch pushes within the same repo. + if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository + runs-on: ubuntu-latest + services: + ispyb: + image: ghcr.io/diamondlightsource/ispyb-database:v3.0.0 + ports: + - 3306:3306 + env: + MARIADB_ROOT_PASSWORD: rootpassword + options: > + --health-cmd "/usr/local/bin/healthcheck.sh --defaults-file=/ispyb/.my.cnf --connect" + env: + DATABASE_URL: mysql://root:rootpassword@localhost/ispyb_build + steps: + - name: Checkout source + uses: actions/checkout@v4.1.1 + + - name: Install dependencies + uses: awalsh128/cache-apt-pkgs-action@v1.4.2 + with: + packages: libopencv-dev clang libclang-dev + + - name: Install stable toolchain + uses: actions-rs/toolchain@v1.0.7 + with: + toolchain: stable + default: true + + - name: Cache Rust Build + uses: Swatinem/rust-cache@v2.7.3 + + - name: Test + uses: actions-rs/cargo@v1.0.3 + with: + command: test + args: > + --all-targets + --all-features diff --git a/.github/workflows/container.yml b/.github/workflows/container.yml new file mode 100644 index 0000000..44a4196 --- /dev/null +++ b/.github/workflows/container.yml @@ -0,0 +1,63 @@ +name: Container + +on: + push: + pull_request: + +jobs: + build: + # Deduplicate jobs from pull requests and branch pushes within the same repo. + if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository + runs-on: ubuntu-latest + services: + ispyb: + image: ghcr.io/diamondlightsource/ispyb-database:v3.0.0 + ports: + - 3306:3306 + env: + MARIADB_ROOT_PASSWORD: rootpassword + options: > + --health-cmd "/usr/local/bin/healthcheck.sh --defaults-file=/ispyb/.my.cnf --connect" + permissions: + contents: read + packages: write + steps: + - name: Checkout Code + uses: actions/checkout@v4.1.1 + + - name: Generate Image Name + run: echo IMAGE_REPOSITORY=ghcr.io/$(echo "${{ github.repository }}" | tr '[:upper:]' '[:lower:]' | tr '[_]' '[\-]') >> $GITHUB_ENV + + - name: Log in to GitHub Docker Registry + if: github.event_name != 'pull_request' + uses: docker/login-action@v3.0.0 + with: + registry: ghcr.io + username: ${{ github.actor }} + password: ${{ secrets.GITHUB_TOKEN }} + + - name: Docker Metadata + id: meta + uses: docker/metadata-action@v5.5.1 + with: + images: ${{ env.IMAGE_REPOSITORY }} + tags: | + type=ref,event=tag + type=raw,value=latest + + - name: Set up Docker Buildx + uses: docker/setup-buildx-action@v3.1.0 + with: + driver-opts: network=host + + - name: Build Image + uses: docker/build-push-action@v5.2.0 + with: + build-args: DATABASE_URL=mysql://root:rootpassword@localhost:3306/ispyb_build + target: deploy + push: ${{ github.event_name == 'push' && startsWith(github.ref, 'refs/tags') }} + load: ${{ !(github.event_name == 'push' && startsWith(github.ref, 'refs/tags')) }} + tags: ${{ steps.meta.outputs.tags }} + labels: ${{ steps.meta.outputs.labels }} + cache-from: type=gha + cache-to: type=gha,mode=max diff --git a/.github/workflows/devcontainer.yml b/.github/workflows/devcontainer.yml new file mode 100644 index 0000000..f409bcb --- /dev/null +++ b/.github/workflows/devcontainer.yml @@ -0,0 +1,23 @@ +name: Dev Container CI + +on: + push: + pull_request: + +jobs: + build: + # pull requests are a duplicate of a branch push if within the same repo. + if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository + runs-on: ubuntu-latest + steps: + - name: Checkout + uses: actions/checkout@v4.1.1 + + - name: Set up Docker Buildx + uses: docker/setup-buildx-action@v3.1.0 + + - name: Create .env file + run: touch .devcontainer/opa.env + + - name: Build dev container + uses: devcontainers/ci@v0.3.1900000347 diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..19df470 --- /dev/null +++ b/.gitignore @@ -0,0 +1,5 @@ +# Secrets +*.env + +# Rust Builds +/target diff --git a/.vscode/settings.json b/.vscode/settings.json new file mode 100644 index 0000000..999c6a2 --- /dev/null +++ b/.vscode/settings.json @@ -0,0 +1,18 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sessions/src \ + && echo "fn main() {}" > sessions/src/main.rs \ + && cargo build --release + +COPY . /app + +RUN touch models/src/lib.rs \ + && touch sessions/src/main.rs \ + && cargo build --release + +FROM gcr.io/distroless/cc AS deploy + +COPY --from=build /app/target/release/sessions /sessions + +ENTRYPOINT ["/sessions"] diff --git a/LICENSE b/LICENSE new file mode 100644 index 0000000..d9a10c0 --- /dev/null +++ b/LICENSE @@ -0,0 +1,176 @@ + Apache License + Version 2.0, January 2004 + http://www.apache.org/licenses/ + + TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION + + 1. 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