diff --git a/variant_remapping_tools/reads_to_remapped_variants.py b/variant_remapping_tools/reads_to_remapped_variants.py index 1f94be7..87b7b82 100755 --- a/variant_remapping_tools/reads_to_remapped_variants.py +++ b/variant_remapping_tools/reads_to_remapped_variants.py @@ -29,7 +29,7 @@ def calculate_new_variant_definition(left_read, right_read, ref_fasta, original_ right_read.reference_start - left_read.reference_end).upper() if len(set(new_ref).difference(nucleotide_alphabet)) != 0 : - failure_reason = 'Reference Allele not in non ACGT' + failure_reason = 'Reference Allele not in ACGT' new_pos = left_read.reference_end + 1