Code

VCF 4.4 Feature branch #261

Code

Merged

tcezard merged 29 commits intomasterEBIvariation/vcf-validator:masterfrom dev/vcf4.4EBIvariation/vcf-validator:dev/vcf4.4Copy head branch name to clipboardOct 11, 2024

+41,633-230,585

Commits

Commits on Feb 1, 2024

• passed_CNV.vcf:

  Show description for a199cba
  tcezard

  committed
  a199cba

Commits on Mar 12, 2024

• vcf4.4 initial changes

  vasudeva8

  committed
  313458b

Commits on Mar 20, 2024

• Merge pull request #240 from vasudeva8/44-1

  Show description for ee919cc
  tcezard

  authored
  ee919cc

• Merge pull request #235 from tcezard/vcf4.4/test_files

  Show description for deb90bd
  tcezard

  authored
  deb90bd

Commits on Apr 24, 2024

• CN, SVCLAIM vcf4.4 update, test changes to follow

  vasudeva8

  committed
  c951df6

Commits on May 2, 2024

• STR test files passing and failing spec check

  tcezard

  committed
  10735ae

• Test file checking the newly allowed phasing notation

  tcezard

  committed
  1fc11b3

• Fix tab issue

  tcezard

  committed
  d096660

• Fix error in test files

  tcezard

  committed
  94bd383

Commits on May 13, 2024

• test file update for svclaim, svlen, cn

  vasudeva8

  committed
  c169889

• changes for CN, SVLEN, SVCLAIM, BND with updated test files and tests

  vasudeva8

  committed
  d50c69c

Commits on May 20, 2024

• review comment updates

  vasudeva8

  committed
  f17a95f

Commits on Jun 10, 2024

• Update src/vcf/record.cpp

  Show description for 17c6aa4
  

  vasudeva8

  and

  apriltuesday

  authored
  17c6aa4

Commits on Jun 13, 2024

• Merge pull request #246 from vasudeva8/44-2

  Show description for 2ae356d
  tcezard

  authored
  2ae356d

• Merge pull request #244 from tcezard/test_files

  Show description for 004c7e5
  tcezard

  authored
  004c7e5

Commits on Jul 17, 2024

• update for CNV:TR and optional leading phasing info (#249)

  vasudeva8

  authored
  3f063cd

• GA4GHTT-270: Merge changes from master (241, 247, 248) and porting 248 for 4.4 (#251)

  Show description for 925f3af
  

  vasudeva8

  and

  tcezard

  authored
  925f3af

Commits on Aug 9, 2024

• GA4GHTT-276 - minor update (#252)

  Show description for f64aa25
  vasudeva8

  authored
  f64aa25

Commits on Aug 14, 2024

• optional fields on meta def, CN, CICN, CN-SVLEN, Number P

  vasudeva8

  committed
  b0b623d

• update for P, extended string split, PSL, PSO, PSQ

  vasudeva8

  committed
  8125b09

Commits on Aug 27, 2024

• Update inc/vcf/file_structure.hpp

  Show description for 166bb8a
  

  vasudeva8

  and

  tcezard

  authored
  166bb8a

Commits on Aug 28, 2024

• review update

  vasudeva8

  committed
  8eea3cd

Commits on Sep 4, 2024

• Merge pull request #254 from vasudeva8/44-4-1

  Show description for 1ccb5a1
  tcezard

  authored
  1ccb5a1

Commits on Sep 12, 2024

• GA4GHTT-276: v4.4 test file update and minor fixes (#255)

  Show description for a4eea2e
  vasudeva8

  authored
  a4eea2e

Commits on Sep 23, 2024

• ragel output with -G2 and warning updates (#258)

  Show description for d1b0720
  vasudeva8

  authored
  d1b0720

Commits on Oct 10, 2024

• odb dependency removed, debugulator removed from build (#257)

  vasudeva8

  authored
  6bd439d

Commits on Oct 11, 2024

• Merge branch 'master' into dev/vcf4.4

  tcezard

  authored
  6ed9dc3

• Remove debugulator from build and release

  tcezard

  committed
  dcdfd65

• Merge pull request #262 from tcezard/remove_debugulator

  Show description for 98da794
  tcezard

  authored
  98da794