template-updater.yml

name: Updating templates

on:
  schedule:
    - cron:  '0 13 * * 1'
  workflow_dispatch:

jobs:
  build:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v2
    - name: Set up Python 3.11
      uses: actions/setup-python@v2
      with:
        python-version: 3.11
    - name: Install dependencies
      run: |
        python -m pip install --upgrade pip
        pip install -r scripts/requirements.txt

    - name: Run template
      run: python scripts/template_updater.py

    - name: Show differences
      run: 'git diff --stat'
    - name: Create Pull Request
      id: cpr
      uses: peter-evans/create-pull-request@v3
      with:
        token: ${{ secrets.GITHUB_TOKEN }}
        commit-message: Update ENA templates 
        title: 'Automatic update ENA templates'
        body: |
          This PR is automatically generated based on changes in the ena_upload/templates/ENA_template_samples_ERC0000XX.xml files.

          Please verify if these changes are valid.
        labels: |
          automatic PR
        reviewers: bedroesb
        branch: checklist_update
        base: main

    - name: Check output
      run: |
        echo "Pull Request Number - ${{ steps.cpr.outputs.pull-request-number }}"