Jenkinsfile

podTemplate(
    //idleMinutes : 30,
    podRetention : onFailure(),
    activeDeadlineSeconds : 3600,
    containers: [
        containerTemplate(
            name: 'dtk-rpm-builder', 
            image: 'docker-production.packages.idmod.org/idm/dtk-rpm-builder:0.1',
            command: 'sleep', 
            args: '30d'
            )
  ]) {
  node(POD_LABEL) {
    container('dtk-rpm-builder'){
			stage('Cleanup Workspace') {		    
				cleanWs()
				echo "Cleaned Up Workspace For Project"
				echo "${params.BRANCH}"
			}
			stage('Prepare') {
				//sh 'python --version'
				sh 'python3 --version'
				sh 'pip3 --version'

				sh 'python3 -m pip install --upgrade pip'
				//sh 'python3 -m pip install --upgrade wheel'
				sh "pip3 install wheel"
				sh 'python3 -m pip install --upgrade setuptools'
				sh 'pip3 freeze'
				// mpich should be installed in this container already
				//sh 'yum -y remove mpich'
				//sh 'yum -y install mpich-3.2'
				//sh 'export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib64/mpich/lib'
			}
			stage('Code Checkout') {
				if (env.CHANGE_ID) {
					echo "I execute on the pull request ${env.CHANGE_ID}"
					checkout([$class: 'GitSCM',
					branches: [[name: "pr/${env.CHANGE_ID}/head"]],
					doGenerateSubmoduleConfigurations: false,
					extensions: [],
					gitTool: 'Default',
					submoduleCfg: [],
					userRemoteConfigs: [[refspec: '+refs/pull/*:refs/remotes/origin/pr/*', credentialsId: '704061ca-54ca-4aec-b5ce-ddc7e9eab0f2', url: 'git@github.com:InstituteforDiseaseModeling/emodpy.git']]])
				} else {
					echo "I execute on the ${env.BRANCH_NAME} branch"
					git branch: "${env.BRANCH_NAME}",
					credentialsId: '704061ca-54ca-4aec-b5ce-ddc7e9eab0f2',
					url: 'git@github.com:InstituteforDiseaseModeling/emodpy.git'
				}
			}
			stage('Build') {
				sh 'pwd'
				sh 'ls -a'
				sh 'python3 setup.py bdist_wheel'
				 
			}
			stage('Install') {
				def curDate = sh(returnStdout: true, script: "date").trim()
				echo "The current date is ${curDate}"

				echo "I am installing emodpy from wheel file built from code"
				def wheelFile = sh(returnStdout: true, script: "find ./dist -name '*.whl'").toString().trim()
				//def wheelFile = sh(returnStdout: true, script: "python3 ./.github/scripts/get_wheel_filename.py --package-file package_setup.py").toString().trim()
				echo "This is the package file: ${wheelFile}"
				sh "pip3 install $wheelFile --index-url=https://packages.idmod.org/api/pypi/pypi-production/simple"
				 
				sh "pip3 install py-make"
				// In python 3.9 environment, dataclasses should be installed at this point.
				//sh "pip3 install dataclasses"
				sh "pip3 install idmtools_test --index-url=https://packages.idmod.org/api/pypi/pypi-production/simple"
                // withCredentials([string(credentialsId: 'idm_bamboo_user', variable: 'user'), string(credentialsId: 'idm_bamboo_user_password', variable: 'password')]) {
				//		sh 'pip3 install emod_generic==0.0.21 --index-url=https://$user:$password@packages.idmod.org/api/pypi/pypi-staging/simple --force-reinstall --no-cache-dir'
				//	} 
				sh "pip3 install emod_generic --index-url=https://packages.idmod.org/api/pypi/pypi-production/simple"
				sh 'pip3 install keyrings.alt'
				sh "pip3 install pytest-xdist"
				sh "pip3 freeze"
			}
			stage('Login and Test') {
				withCredentials([usernamePassword(credentialsId: 'comps2_jenkins_user', usernameVariable: 'COMPS2_USERNAME', passwordVariable: 'COMPS2_PASSWORD')]) {
        		    		sh 'python3 .dev_scripts/create_auth_token_args.py --comps_url https://comps2.idmod.org --username $COMPS2_USERNAME --password $COMPS2_PASSWORD'
            			}
				echo "Running Emodpy Tests"
				dir('tests') {
					sh "pytest -n 0 test_download_from_package.py"
					sh 'pytest -n 10 --dist loadfile -v -m emod --junitxml="result.xml"'
  		    junit '*.xml'
				}
			}
		}
	}
  }