From 5fde3b19aae4998708167d14eaba9ef5584c8069 Mon Sep 17 00:00:00 2001
From: Alexander Dummer <62308023+alexdummer@users.noreply.github.com>
Date: Fri, 3 May 2024 13:44:25 +0200
Subject: [PATCH 1/8] Create test.yml

---
 .github/workflows/test.yml | 82 ++++++++++++++++++++++++++++++++++++++
 1 file changed, 82 insertions(+)
 create mode 100644 .github/workflows/test.yml

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
new file mode 100644
index 0000000..28905f4
--- /dev/null
+++ b/.github/workflows/test.yml
@@ -0,0 +1,82 @@
+name: Run tests
+
+on: [push, pull_request]
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - name: Setup Mambaforge
+        uses: conda-incubator/setup-miniconda@v2
+        with:
+          use-mamba: true
+          miniforge-variant: Mambaforge
+          miniforge-version: latest
+          activate-environment: anaconda-client-env
+              
+      - name: Install conda packages
+        shell: bash -l {0}
+        run: |
+          mamba install --file requirements.txt
+
+      - name: Install Eigen
+        shell: bash -l {0}
+        run: |
+          git clone --branch 3.4.0 https://gitlab.com/libeigen/eigen.git
+          cd eigen 
+          mkdir build
+          cd build 
+          cmake -DBUILD_TESTING=OFF  -DINCLUDE_INSTALL_DIR=$CONDA_PREFIX/include -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX ..
+          make install
+          cd ../..
+
+      - name: Install Autodiff
+        shell: bash -l {0}
+        run: |
+          git clone --branch v1.1.0 https://github.com/autodiff/autodiff.git
+          cd autodiff
+          mkdir build
+          cd build
+          cmake -DAUTODIFF_BUILD_TESTS=OFF \
+            -DAUTODIFF_BUILD_PYTHON=OFF \
+            -DAUTODIFF_BUILD_EXAMPLES=OFF \
+            -DAUTODIFF_BUILD_DOCS=OFF \
+            -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX \
+            ..
+          make install
+          cd ../..
+
+      - name: Install Fastor
+        shell: bash -l {0}
+        run: |
+          git clone https://github.com/romeric/Fastor.git
+          cd Fastor
+          cmake -DBUILD_TESTING=OFF -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX .
+          make install
+          cd ..
+
+      - name: Install Marmot
+        shell: bash -l {0}
+        run: |
+          git clone --recurse-submodules https://github.com/MAteRialMOdelingToolbox/Marmot/
+          cd Marmot
+          mkdir build
+          cd build
+          cmake -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX ..
+          make install
+          cd ../..
+
+      - name: Build EdelweissFE
+        shell: bash -l {0}
+        run: |
+          git clone https://github.com/EdelweissFE/EdelweissFE.git
+          pip install .
+          cd ..
+
+      - name: Run tests
+        shell: bash -l {0}
+        run: |
+          python run_tests_edelweiss.py

From 76e3c26aeac05adc171a461025350f0032d8e42b Mon Sep 17 00:00:00 2001
From: Alexander Dummer <62308023+alexdummer@users.noreply.github.com>
Date: Fri, 3 May 2024 13:46:33 +0200
Subject: [PATCH 2/8] Update test.yml

---
 .github/workflows/test.yml | 7 ++-----
 1 file changed, 2 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 28905f4..cfb838e 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -16,11 +16,6 @@ jobs:
           miniforge-variant: Mambaforge
           miniforge-version: latest
           activate-environment: anaconda-client-env
-              
-      - name: Install conda packages
-        shell: bash -l {0}
-        run: |
-          mamba install --file requirements.txt
 
       - name: Install Eigen
         shell: bash -l {0}
@@ -73,6 +68,8 @@ jobs:
         shell: bash -l {0}
         run: |
           git clone https://github.com/EdelweissFE/EdelweissFE.git
+          cd EdelweissFE
+          mamba install -r requirements.txt
           pip install .
           cd ..
 

From 21f8c711596973f7c4217b4ce9ebb0a45cd7b01f Mon Sep 17 00:00:00 2001
From: Alexander Dummer <62308023+alexdummer@users.noreply.github.com>
Date: Fri, 3 May 2024 14:00:01 +0200
Subject: [PATCH 3/8] Update test.yml

---
 .github/workflows/test.yml | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index cfb838e..9a45efc 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -69,11 +69,12 @@ jobs:
         run: |
           git clone https://github.com/EdelweissFE/EdelweissFE.git
           cd EdelweissFE
-          mamba install -r requirements.txt
+          mamba install --file requirements.txt
           pip install .
           cd ..
 
       - name: Run tests
         shell: bash -l {0}
         run: |
+          python -m pip install -r requirements.txt
           python run_tests_edelweiss.py

From 281df03ff11ceac9ea8d7f83f0e0c8dd76c1578d Mon Sep 17 00:00:00 2001
From: Alexander Dummer <62308023+alexdummer@users.noreply.github.com>
Date: Fri, 3 May 2024 14:06:35 +0200
Subject: [PATCH 4/8] Update test.yml

---
 .github/workflows/test.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 9a45efc..b44aef8 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -77,4 +77,4 @@ jobs:
         shell: bash -l {0}
         run: |
           python -m pip install -r requirements.txt
-          python run_tests_edelweiss.py
+          python run_edelweiss_tests.py

From 25a6e1e756766d220c24b3b675e276ab71f84c4d Mon Sep 17 00:00:00 2001
From: Alexander Dummer <62308023+alexdummer@users.noreply.github.com>
Date: Fri, 3 May 2024 14:40:01 +0200
Subject: [PATCH 5/8] enforce integers in randint input

---
 buzzard/interfaces/edelweiss.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/buzzard/interfaces/edelweiss.py b/buzzard/interfaces/edelweiss.py
index 62c192d..ec804a7 100644
--- a/buzzard/interfaces/edelweiss.py
+++ b/buzzard/interfaces/edelweiss.py
@@ -62,7 +62,7 @@ def getInputDictWithCurrentParameters(currParams: np.ndarray, sim: Simulation) -
         Input dictionary for EdelweissFE.
     """
 
-    randomFileName = "_temp_" + str(rd.randint(0, 1e16)) + ".inp"
+    randomFileName = "_temp_" + str(rd.randint(0, int(1e16))) + ".inp"
 
     paramIDX = 0
 

From b9a289127ae24a9cd3948a5d8ff4392977cb9df1 Mon Sep 17 00:00:00 2001
From: Alexander Dummer <62308023+alexdummer@users.noreply.github.com>
Date: Fri, 3 May 2024 14:55:48 +0200
Subject: [PATCH 6/8] Update sphinx.yml

---
 .github/workflows/sphinx.yml | 20 ++++----------------
 1 file changed, 4 insertions(+), 16 deletions(-)

diff --git a/.github/workflows/sphinx.yml b/.github/workflows/sphinx.yml
index 360334e..ebb66f1 100644
--- a/.github/workflows/sphinx.yml
+++ b/.github/workflows/sphinx.yml
@@ -1,12 +1,6 @@
 name: Documentation
 
-on:
-  push:
-    branches: [ master ]
-  pull_request:
-    branches: [ master ]
-  workflow_dispatch:
-    branches: [ master ]
+on: [push, pull_request]
 
 jobs:
   build:
@@ -34,7 +28,7 @@ jobs:
       - name: Install Eigen
         shell: bash -l {0}
         run: |
-          git clone https://gitlab.com/libeigen/eigen.git
+          git clone --branch 3.4.0 https://gitlab.com/libeigen/eigen.git
           cd eigen 
           mkdir build
           cd build 
@@ -45,7 +39,7 @@ jobs:
       - name: Install Autodiff
         shell: bash -l {0}
         run: |
-          git clone https://github.com/autodiff/autodiff.git
+          git clone --branch v1.1.0 https://github.com/autodiff/autodiff.git
           cd autodiff
           mkdir build
           cd build
@@ -68,7 +62,7 @@ jobs:
         shell: bash -l {0}
         run: |
           cd EdelweissFE
-          python setup.py build_ext -i
+          python -m pip install .
           cd ..
 
       - name: Building Buzzard documentation
@@ -79,12 +73,6 @@ jobs:
           echo $EDELWEISS_PATH
           sphinx-build ./doc/source/ ./docs -b html
           
-      - name: Run Buzzard tests
-        shell: bash -l {0}
-        run: |
-          export EDELWEISS_PATH=/home/runner/work/Buzzard/Buzzard/EdelweissFE
-          python run_edelweiss_tests.py 
-          
       - name: Deploy
         uses: peaceiris/actions-gh-pages@v3
         with:

From 3c871ade5e9263ff7db27cf5877d5b28f217b75e Mon Sep 17 00:00:00 2001
From: Alexander Dummer <62308023+alexdummer@users.noreply.github.com>
Date: Fri, 3 May 2024 14:57:52 +0200
Subject: [PATCH 7/8] Update test.yml

---
 .github/workflows/test.yml | 15 ++++-----------
 1 file changed, 4 insertions(+), 11 deletions(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index b44aef8..0c1b264 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -1,6 +1,8 @@
 name: Run tests
 
-on: [push, pull_request]
+on:
+  schedule:
+  - cron: "0 0 * * *"
 
 jobs:
   build:
@@ -44,15 +46,6 @@ jobs:
           make install
           cd ../..
 
-      - name: Install Fastor
-        shell: bash -l {0}
-        run: |
-          git clone https://github.com/romeric/Fastor.git
-          cd Fastor
-          cmake -DBUILD_TESTING=OFF -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX .
-          make install
-          cd ..
-
       - name: Install Marmot
         shell: bash -l {0}
         run: |
@@ -73,7 +66,7 @@ jobs:
           pip install .
           cd ..
 
-      - name: Run tests
+      - name: Run Buzzard tests
         shell: bash -l {0}
         run: |
           python -m pip install -r requirements.txt

From 109bf6f1275bda0e14cc81a5d0c3d40db04272fc Mon Sep 17 00:00:00 2001
From: Alexander Dummer <62308023+alexdummer@users.noreply.github.com>
Date: Fri, 3 May 2024 15:07:53 +0200
Subject: [PATCH 8/8] Update test.yml

---
 .github/workflows/test.yml | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 0c1b264..1e369ee 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -3,6 +3,12 @@ name: Run tests
 on:
   schedule:
   - cron: "0 0 * * *"
+  push:
+    branches:
+      - "master"
+  pull_request:
+    branches:
+      - "master"
 
 jobs:
   build: