workflow.qmd

---
title: "Suggested workflow for epidemiological modeling and inference"
author: Qianying (Ruby) Lin, Spencer J. Fox, Zian (Larry) Zhuang
format: 
  html: 
    include-after-body:
        - _slides/_includes/lesson_bottom.html
        - _slides/_includes/license.html
output:
  html_document:
    toc: no
params:
  prefix: metapop
---


|                              |                                                   |
|-----------------------------------|--------------------------------------------------------|
| Suggested workflow slides         | [PDF](slides/workflow/main.pdf)|
| **Data** for the lesson.          | [data](slides/workflow/Measles_Consett_1948.csv)|
| **R** script for the Measles SIR model | [**R**](slides/workflow/model_measSIR.R)|
| **R** script for the workflow     | [**R**](slides/workflow/main.R)|