A package of RNAseq QC and analysis tools for the Enge lab.
if(!"devtools" %in% rownames(installed.packages())) {
install.packages("devtools")
}
devtools::install_github("EngeLab/RNAseqFunctions")
The vignette for loading and filtering counts data can be viewed in R with the following command:
vignette("loadAndFilterFuns", package = "RNAseqFunctions")
The vignette for running t-SNE and plotting can be viewed in R with the following command:
vignette("tsneAndPlotting", package = "RNAseqFunctions")