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deBruijn.html
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<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
<html><head><title>Python: module deBruijn</title>
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<font color="#ffffff" face="helvetica, arial"> <br><big><big><strong>deBruijn</strong></big></big></font></td
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><font color="#ffffff" face="helvetica, arial"><a href=".">index</a><br><a href="file:/cygdrive/c/Users/Usuario/Desktop/Programming/DNA-Assembler-master/DNA-Assembler/deBruijn.py">/cygdrive/c/Users/Usuario/Desktop/Programming/DNA-Assembler-master/DNA-Assembler/deBruijn.py</a></font></td></tr></table>
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<font color="#ffffff" face="helvetica, arial"><big><strong>Modules</strong></big></font></td></tr>
<tr><td bgcolor="#aa55cc"><tt> </tt></td><td> </td>
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<font color="#ffffff" face="helvetica, arial"><big><strong>Classes</strong></big></font></td></tr>
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<dt><font face="helvetica, arial"><a href="deBruijn.html#deBruijn_Graph">deBruijn_Graph</a>
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<font color="#000000" face="helvetica, arial"><a name="deBruijn_Graph">class <strong>deBruijn_Graph</strong></a></font></td></tr>
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<td colspan=2><tt>Class used to build de Bruijn graph with the k-mers<br> </tt></td></tr>
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<td width="100%">Methods defined here:<br>
<dl><dt><a name="deBruijn_Graph-__init__"><strong>__init__</strong></a>(self, k)</dt><dd><tt>@Parameter k: It's an interger value that represents the k-mers length<br>
Method used to initialize the class' attributes</tt></dd></dl>
<dl><dt><a name="deBruijn_Graph-add_string_to_graph"><strong>add_string_to_graph</strong></a>(self, st)</dt><dd><tt>@Parameter st: It's a string that contains the segment of DNA<br>
This method builds and adds the string's k-mers to the graph</tt></dd></dl>
<dl><dt><a name="deBruijn_Graph-getString"><strong>getString</strong></a>(self)</dt><dd><tt>This method calls dfs and _listToString to build the string with the k-mers</tt></dd></dl>
<dl><dt><a name="deBruijn_Graph-graphvizExport"><strong>graphvizExport</strong></a>(self)</dt><dd><tt>This method shows the shape of deBruijn graph</tt></dd></dl>
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