neko_cpu.def

BootStrap: docker
From: ubuntu:22.04

%setup
mkdir ${APPTAINER_ROOTFS}/neko
mkdir ${APPTAINER_ROOTFS}/neko_install
mkdir ${APPTAINER_ROOTFS}/pfunit_install

%post
export DEBIAN_FRONTEND=noninteractive
apt-get update
apt-get install -y gcc gfortran g++ make git m4 python3  cmake-curses-gui python-is-python3
apt-get install -y libopenblas-dev
apt-get install -y openmpi-bin libopenmpi-dev autoconf automake autotools-dev
apt-get install -y vim pkg-config
apt-get install -y makedepf90
git clone https://github.com/Goddard-Fortran-Ecosystem/pFUnit.git -b v4.4.2
cd pFUnit
cat >> pfunit_error_stop.patch << _ACEOF
diff --git a/src/funit/FUnit.F90 b/src/funit/FUnit.F90
index 7df7b65..4f7dbf5 100644
--- a/src/funit/FUnit.F90
+++ b/src/funit/FUnit.F90
@@ -168,7 +168,7 @@ contains
 #if defined(PGI)
          call exit(-1)
 #else
-         stop '*** Encountered 1 or more failures/errors during testing. ***'
+         error stop '*** Encountered 1 or more failures/errors during testing. ***'
 #endif
       end if

_ACEOF
git apply pfunit_error_stop.patch && mkdir b && cd b
cmake -DCMAKE_INSTALL_PREFIX=/pfunit_install .. && make -j$(nproc) && make install

%runscript
    cd /neko
    make clean
    ./regen.sh
    ./configure FC=${FC} FCFLAGS="-O2 -pedantic -std=f2008"  --with-pfunit=/pfunit_install/PFUNIT-4.4 --prefix=/neko_install
    cd /neko/src && make depend && cd /neko
    ./regen.sh
    ./configure FC=${FC} FCFLAGS="-O2 -pedantic -std=f2008"  --with-pfunit=/pfunit_install/PFUNIT-4.4 --prefix=/neko_install
    make check -j