README.md

MINC and OBJ File Format Converter

pl-mni2common is a ChRIS ds plugin wrapper around the programs mnc2nii and mni2mz3. It converts MINC volumes to NIFTI, surfaces to MZ3, and surface data to MZ3. The output file formats NIFTI and MZ3 are convenient for visualization by niivue.

Local Usage

apptainer exec docker://ghcr.io/fnndsc/pl-mni2common:latest mni2common input/ output/