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synonymy management script #279

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cmrn-rhi opened this issue Aug 11, 2023 · 0 comments
Open

synonymy management script #279

cmrn-rhi opened this issue Aug 11, 2023 · 0 comments
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project proposal Potential MSc/PhD/RA projects to support ontology curation and/or development

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@cmrn-rhi
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Discussed at CIDGOH "Ontology Curation & Ontology Research" Meeting (2023-08-09):

  • Proposed as a MSc project/subproject.
  • Would require some literature review and scripting.
  • Deep learning models could also be used to help apply synonymy.

It would be great to have a script to help manage with synonymy, performing tasks such as:

  • Checking if a synonym being repeated across several words. Help inform if it should be made a class instead and which terms would need to be updated were that to occur.
  • When making a new term, need a means check if any existing terms us it or an alternative label as a "broad" or "narrow" synonym. That way we can make sure the existing terms relation are updated to "parent class" or "subclass" as appropriate.
  • Assist in managing synonym as a separate file from the owl, edit-owl, and non-merged ROBOT tables, such that people can more easily include or exclude synonym as appropriate for their needs.
@cmrn-rhi cmrn-rhi added the project proposal Potential MSc/PhD/RA projects to support ontology curation and/or development label Aug 11, 2023
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Labels
project proposal Potential MSc/PhD/RA projects to support ontology curation and/or development
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