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possible optimizations #1

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rchikhi opened this issue Jan 23, 2016 · 1 comment
Open

possible optimizations #1

rchikhi opened this issue Jan 23, 2016 · 1 comment

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@rchikhi
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rchikhi commented Jan 23, 2016

  • faster glue by writing minimizers and canonical kmers in the FASTA header of seqs to glue
  • a separate thread is responsible for all disk writes (by continuously checking buffers)
@Malfoy
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Malfoy commented Mar 24, 2016

-not an optimization but the name of the repository could be bcalm2
-zip IO

@Ritu-Kundu Ritu-Kundu mentioned this issue Mar 1, 2018
rchikhi pushed a commit that referenced this issue Jan 9, 2023
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