reference genome for direct rna seq data

[YantingHuang]

Hi,

Thanks for the great software! I have a question regarding the alignment step:

I saw from the demo you provided that the reference genome you used is Homo_sapiens.GRCh38.cdna.ncrna_wtChrIS_modified-directRNA-32G_mapont.mmi. Could you provide a url linked to this file?

Also, I would like to confirm that whether this is the indexed file for a reference genome fasta.

Thanks,
Yanting

[ploy-np]

Hi @YantingHuang,

Now I just uploaded to our zenodo (https://zenodo.org/record/5225625). And here is the direct link to the fastA file https://zenodo.org/record/5225625/files/Homo_sapiens.GRCh38.cdna.ncrna_wtChrIs_modified.fa