DESCRIPTION

Package: EvoPhylo
Version: 0.3.3
Title: Pre- And Postprocessing of Morphological Data from Relaxed Clock Bayesian Phylogenetics
Description: Performs automated morphological character partitioning for 
             phylogenetic analyses and analyze macroevolutionary parameter 
             outputs from clock (time-calibrated) Bayesian inference analyses, following 
             concepts introduced by Simões and Pierce (2021) <doi:10.1038/s41559-021-01532-x>.
Authors@R: c(
  person("Tiago", "Simoes", role = c("cre", "aut"),
         email = "trsimoes87@gmail.com", 
         comment = c(ORCID = "0000-0003-4716-649X")),
  person("Noah", "Greifer", role = c("aut"), 
         email = "ngreifer@iq.harvard.edu",
	       comment = c(ORCID="0000-0003-3067-7154")),
  person("Joelle", "Barido-Sottani", role = c("aut"), 
         email = "joelle.barido-sottani@m4x.org",
	       comment = c(ORCID="0000-0002-5220-5468")),
  person("Stephanie", "Pierce", role = c("aut"),
         email = "spierce@oeb.harvard.edu", 
         comment = c(ORCID = "0000-0003-0717-1841"))
  )
Depends:
    R (>= 4.0.0)
Imports:
    ape (>= 1.16.2),
    dplyr (>= 1.0.8),
    cluster (>= 2.1.2),
	  deeptime (>= 0.2.0),
    ggplot2 (>= 3.3.5),
    ggrepel (>= 0.9.1),
    ggtree (>= 3.1.5.902),
	  patchwork,
    treeio (>= 1.16.2),
	  Rtsne (>= 0.15),
    unglue (>= 0.1.0),
    devtools (>= 2.4.3)
Suggests:
    kableExtra,
    knitr,
	  rmarkdown
Encoding: UTF-8
LazyData: false
License: GPL (>=2)
URL: https://github.com/tiago-simoes/EvoPhylo,
    https://tiago-simoes.github.io/EvoPhylo/
BugReports: https://github.com/tiago-simoes/EvoPhylo/issues
VignetteBuilder: knitr
RoxygenNote: 7.2.3