Singularity.gnu-openmpi-dev

BootStrap: docker
From: jcsda/docker-gnu-openmpi-dev:latest

%labels
MAINTAINER Mark Miesch
SPECIES JEDI

%environment
    TERM=xterm
    export TERM
    GIT_MERGE_AUTOEDIT=no
    export GIT_MERGE_AUTOEDIT
    export LANG=en_US.UTF-8
    export LANGUAGE=en_US:en
    export PATH=/usr/local/bin:/usr/local/sbin:/usr/sbin:/usr/bin:/sbin:/bin

%post
    echo "Hello from inside the container"
    apt-get update
    apt-get install -y --no-install-recommends sqlite3
    apt-get install -y --no-install-recommends libsqlite3-dev libtiff-dev
    apt-get install -y --no-install-recommends libgeos-dev libgeos++-dev
    apt-get install -y --no-install-recommends feh
    apt-get install -y --no-install-recommends default-jre
    python3 -m pip install -U click
    python3 -m pip install -U pandas
    python3 -m pip install -U numpy
    python3 -m pip install -U matplotlib
    python3 -m pip install -U shapely
    python3 -m pip install -U pyshp
    python3 -m pip install -U ruamel.yaml
    cd /root
    wget https://download.osgeo.org/proj/proj-8.1.1.tar.gz
    tar xvf proj-8.1.1.tar.gz
    cd proj-8.1.1
    mkdir build
    cd build
    cmake ..
    cmake --build .
    cmake --build . --target install
    python3 -m pip install -U pyproj
    python3 -m pip install -U cartopy
    rm -rf /root/proj-*
    rm -rf /var/lib/apt/lists/*

%runscript
    bash -l