forked from openmm/openmm
-
Notifications
You must be signed in to change notification settings - Fork 0
/
.travis.yml
executable file
·200 lines (184 loc) · 7.08 KB
/
.travis.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
language: python
addons:
apt:
packages:
- gromacs
- doxygen
- python-numpy
- python-scipy
- libfftw3-dev
env:
global:
- CCACHE=$HOME/ccache/lib/ccache/bin
matrix:
include:
- sudo: required
dist: trusty
env: ==CPU_OPENCL==
OPENCL=true
CUDA=false
CC=$CCACHE/gcc
CXX=$CCACHE/g++
CMAKE_FLAGS="
-OPENMM_BUILD_OPENCL_LIB=ON
-DOPENMM_BUILD_OPENCL_TESTS=ON
-DOPENMM_BUILD_STATIC_LIB=OFF
-DOPENMM_BUILD_CPU_LIB=OFF
-DOPENMM_BUILD_REFERENCE_TESTS=OFF
-DOPENMM_BUILD_SERIALIZATION_TESTS=OFF
-DOPENMM_BUILD_PME_PLUGIN=OFF
-DOPENMM_BUILD_AMOEBA_PLUGIN=OFF
-DOPENMM_BUILD_PYTHON_WRAPPERS=OFF
-DOPENMM_BUILD_C_AND_FORTRAN_WRAPPERS=OFF
-DOPENMM_BUILD_EXAMPLES=OFF
-DOPENCL_INCLUDE_DIR=$HOME/AMDAPPSDK/include
-DOPENCL_LIBRARY=$HOME/AMDAPPSDK/lib/x86_64/libOpenCL.so"
addons: {apt: {packages: []}}
- sudo: required
dist: trusty
env: ==CUDA_COMPILE==
CUDA=true
OPENCL=false
CUDA_VERSION="7.5-18"
CC=$CCACHE/gcc
CXX=$CCACHE/g++
CMAKE_FLAGS="
-DOPENMM_BUILD_CUDA_TESTS=OFF
-DOPENMM_BUILD_OPENCL_TESTS=OFF
-DOPENMM_BUILD_PYTHON_WRAPPERS=OFF
-DOPENMM_BUILD_REFERENCE_TESTS=OFF
-DOPENMM_BUILD_SERIALIZATION_TESTS=OFF
-DOPENMM_BUILD_C_AND_FORTRAN_WRAPPERS=OFF
-DOPENMM_BUILD_EXAMPLES=OFF
-DOPENCL_LIBRARY=/usr/local/cuda-7.5/lib64/libOpenCL.so
-DCUDA_CUDART_LIBRARY=/usr/local/cuda-7.5/lib64/libcudart.so
-DCUDA_NVCC_EXECUTABLE=/usr/local/cuda-7.5/bin/nvcc
-DCUDA_SDK_ROOT_DIR=/usr/local/cuda-7.5/
-DCUDA_TOOLKIT_INCLUDE=/usr/local/cuda-7.5/include
-DCUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda-7.5/"
addons: {apt: {packages: []}}
- language: objective-c
os: osx
env: ==OSX==
OPENCL=false
CUDA=false
CMAKE_FLAGS="
-DOPENMM_BUILD_OPENCL_TESTS=OFF"
addons: {apt: {packages: []}}
- sudo: false
python: 2.7_with_system_site_packages
env: ==STATIC_LIB==
OPENCL=false
CUDA=false
CC=$CCACHE/clang
CXX=$CCACHE/clang++
CMAKE_FLAGS="-DOPENMM_BUILD_STATIC_LIB=ON"
- sudo: false
python: 2.7_with_system_site_packages
env: ==PYTHON_2==
OPENCL=false
CUDA=false
CC=$CCACHE/clang
CXX=$CCACHE/clang++
DOCS_DEPLOY=true
CMAKE_FLAGS="-DOPENMM_GENERATE_API_DOCS=ON"
- sudo: false
python: 3.4
env: ==PYTHON_3==
OPENCL=false
CUDA=false
CC=$CCACHE/gcc
CXX=$CCACHE/g++
CMAKE_FLAGS=""
before_install:
- START_TIME=$(date +%s)
- wget https://anaconda.org/omnia/ccache/3.2.4/download/${TRAVIS_OS_NAME}-64/ccache-3.2.4-0.tar.bz2
- mkdir -p $HOME/ccache && tar xf ccache-3.2.4-0.tar.bz2 -C $HOME/ccache
- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then
brew install doxygen fftw;
sudo easy_install pytest;
fi
- if [[ "$OPENCL" == "true" ]]; then
wget http://s3.amazonaws.com/omnia-ci/AMD-APP-SDKInstaller-v3.0.130.135-GA-linux64.tar.bz2;
tar -xjf AMD-APP-SDK*.tar.bz2;
AMDAPPSDK=${HOME}/AMDAPPSDK;
export OPENCL_VENDOR_PATH=${AMDAPPSDK}/etc/OpenCL/vendors;
mkdir -p ${OPENCL_VENDOR_PATH};
sh AMD-APP-SDK*.sh --tar -xf -C ${AMDAPPSDK};
echo libamdocl64.so > ${OPENCL_VENDOR_PATH}/amdocl64.icd;
export LD_LIBRARY_PATH=${AMDAPPSDK}/lib/x86_64:${LD_LIBRARY_PATH};
chmod +x ${AMDAPPSDK}/bin/x86_64/clinfo;
${AMDAPPSDK}/bin/x86_64/clinfo;
fi
# Install swig for Python wrappers. However, testing CUDA and OpenCL, we
# skip the Python wrapper for speed. We're not using anaconda python,
# but this is a fast way to get an apparently functional precompiled
# build of swig that's more modern than what's in apt.
- if [[ "$OPENCL" == "false" && "$CUDA" == "false" && "$TRAVIS_OS_NAME" == "linux" ]]; then
wget https://anaconda.org/omnia/swig/3.0.7/download/linux-64/swig-3.0.7-0.tar.bz2;
mkdir $HOME/swig;
tar -xjvf swig-3.0.7-0.tar.bz2 -C $HOME/swig;
export PATH=$HOME/swig/bin:$PATH;
export SWIG_LIB=$HOME/swig/share/swig/3.0.7;
fi
- if [[ "$OPENCL" == "false" && "$CUDA" == "false" && "$TRAVIS_OS_NAME" == "osx" ]]; then
wget https://anaconda.org/omnia/swig/3.0.7/download/osx-64/swig-3.0.7-0.tar.bz2;
mkdir $HOME/swig;
tar -xjvf swig-3.0.7-0.tar.bz2 -C $HOME/swig;
export PATH=$HOME/swig/bin:$PATH;
export SWIG_LIB=$HOME/swig/share/swig/3.0.7;
fi
- if [[ "$CUDA" == "true" ]]; then
wget "http://developer.download.nvidia.com/compute/cuda/repos/ubuntu1404/x86_64/cuda-repo-ubuntu1404_${CUDA_VERSION}_amd64.deb";
sudo dpkg -i cuda-repo-ubuntu1404_${CUDA_VERSION}_amd64.deb;
sudo apt-get update -qq;
export CUDA_APT=${CUDA_VERSION%-*};
export CUDA_APT=${CUDA_APT/./-};
sudo apt-get install -y cuda-drivers cuda-core-${CUDA_APT} cuda-cudart-dev-${CUDA_APT} cuda-cufft-dev-${CUDA_APT};
sudo apt-get clean;
export CUDA_HOME=/usr/local/cuda-${CUDA_VERSION%%-*};
export LD_LIBRARY_PATH=${CUDA_HOME}/lib64:${LD_LIBRARY_PATH};
export PATH=${CUDA_HOME}/bin:${PATH};
fi
script:
- cmake . $CMAKE_FLAGS -DCMAKE_INSTALL_PREFIX=$HOME/OpenMM
- make -j2 install
- if [[ "$OPENCL" == "true" ]]; then ./TestOpenCLDeviceQuery; fi
- if [[ "$OPENCL" == "false" && "$CUDA" == "false" ]]; then
if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then
sudo make PythonInstall;
else
make PythonInstall;
fi;
python -m simtk.testInstallation;
(cd python/tests && py.test -v);
fi
# Run the tests, and rerun any failing tests.
- python devtools/run-ctest.py --start-time $START_TIME
- if [[ ! -z "${DOCS_DEPLOY}" && "${DOCS_DEPLOY}" = "true" ]]; then
pip install sphinx sphinxcontrib-bibtex sphinxcontrib-lunrsearch sphinxcontrib-autodoc_doxygen;
make sphinxhtml;
make C++ApiDocs PythonApiDocs;
mkdir -p api-docs;
mv sphinx-docs/userguide/html api-docs/userguide;
mv sphinx-docs/developerguide/html api-docs/developerguide;
mv api-python api-docs;
mv api-c++ api-docs;
fi
deploy:
- provider: s3
access_key_id:
secure: "OEY0sp5FlM4kixFNVAktN6YHwKm5ieMswWCHj3MU+rWsAeGCULl/0kyKTfwCPknVlQv+SXBaPP3I4m1fv9FwHt0bbwy5EfmO4crrW8cE4ofq4vnwHi9UG77oEKKRrbxFUZD1y7ywI2W9SyVI6qfggZlJowRy9GV9Lin5vGzhqsw="
secret_access_key:
secure: "P7DOYn77bH5Gg1obIwCxanhH0Kgh22Pv1pCGvmI6gHXOE1dxf5pnCSQGFKO6g1K6eaN5TbTjh+BmMXmxgkqByvQ4uZtkTGlPq3HI9YeRjZE2H7bRpIYjXXRwA1RMOA3ofLDw1FXNmwMo8BtRIl4jljR5Iw5rytUZmLlk3zgtcr4="
bucket: "docs.openmm.org"
skip_cleanup: true
region: us-west-1
local_dir: api-docs/
upload_dir: development
on:
branch: master
condition: '! -z "${DOCS_DEPLOY}" && "${DOCS_DEPLOY}" = "true"'
cache:
directories:
- $HOME/.ccache