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prep_vis_5n6y.sh
executable file
·111 lines (110 loc) · 6.93 KB
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prep_vis_5n6y.sh
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#!/bin/bash
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 83/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C LYS A 83/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 83/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 83/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N LYS A 83/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 83/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 83/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 83/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H CYS A 275/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C CYS A 275/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H CYS A 275/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H CYS A 275/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S CYS A 275/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H THR A 335/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C THR A 335/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H THR A 335/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O THR A 335/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H THR A 335/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H THR A 335/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H PRO A 338/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C PRO A 338/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H PRO A 338/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H PRO A 338/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C PRO A 338/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O PRO A 338/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ARG A 339/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ARG A 339/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 361/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C LYS A 361/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 361/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 361/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N LYS A 361/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 361/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 361/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H LYS A 361/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H HIS A 423/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C HIS A 423/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C HIS A 423/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H HIS A 423/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N HIS A 423/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C HIS A 423/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H HIS A 423/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N HIS A 423/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H HIS A 423/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O ACH A 501/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ACH A 501/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O ACH A 501/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ACH A 501/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ACH A 501/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ACH A 501/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ACH A 501/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ACH A 501/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ACH A 501/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ACH A 501/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O ACH A 501/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ACH A 501/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ACH A 501/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O ACH A 501/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O ACH A 501/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ACH A 501/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ACH A 501/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H ACH A 501/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C ACH A 501/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O ACH A 501/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O ACH A 501/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S FEV A 502/g" pdb
sed -i "0,/FE ??? 1/s/FE ??? 1/FE FEV A 502/g" pdb
sed -i "0,/FE ??? 1/s/FE ??? 1/FE FEV A 502/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S FEV A 502/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S FEV A 502/g" pdb
sed -i "0,/FE ??? 1/s/FE ??? 1/FE FEV A 502/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C FEV A 502/g" pdb
sed -i "0,/FE ??? 1/s/FE ??? 1/FE FEV A 502/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S FEV A 502/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S FEV A 502/g" pdb
sed -i "0,/FE ??? 1/s/FE ??? 1/FE FEV A 502/g" pdb
sed -i "0,/FE ??? 1/s/FE ??? 1/FE FEV A 502/g" pdb
sed -i "0,/FE ??? 1/s/FE ??? 1/FE FEV A 502/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S FEV A 502/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S FEV A 502/g" pdb
sed -i "0,/ S ??? 1/s/ S ??? 1/ S FEV A 502/g" pdb
sed -i "0,/ V ??? 1/s/ V ??? 1/ V FEV A 502/g" pdb
sed -i "0,/ C ??? 1/s/ C ??? 1/ C CO3 A 519/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O CO3 A 519/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O CO3 A 519/g" pdb
sed -i "0,/ O ??? 1/s/ O ??? 1/ O CO3 A 519/g" pdb
sed -i "0,/ H ??? 1/s/ H ??? 1/ H CO3 A 519/g" pdb
sed -i "0,/ N ??? 1/s/ N ??? 1/ N CO3 A 519/g" pdb