From d60040ab594b6d1cef84d24f2c68f0ed38a75f0d Mon Sep 17 00:00:00 2001
From: snyk-bot <snyk-bot@snyk.io>
Date: Sat, 27 Jul 2024 06:11:50 +0000
Subject: [PATCH] fix: java-jsi-clus-pct-ts/pom.xml to reduce vulnerabilities

The following vulnerabilities are fixed with an upgrade:
- https://snyk.io/vuln/SNYK-JAVA-COMFASTERXMLJACKSONCORE-7569538
---
 java-jsi-clus-pct-ts/pom.xml | 344 +++++++++++++++++------------------
 1 file changed, 172 insertions(+), 172 deletions(-)

diff --git a/java-jsi-clus-pct-ts/pom.xml b/java-jsi-clus-pct-ts/pom.xml
index d28c947e..856470d8 100644
--- a/java-jsi-clus-pct-ts/pom.xml
+++ b/java-jsi-clus-pct-ts/pom.xml
@@ -1,174 +1,174 @@
 <project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-	<modelVersion>4.0.0</modelVersion>
-
-	<groupId>eu.humanbrainproject.mip.algorithms.jsi</groupId>
-	<artifactId>jsi-clus-pct-ts</artifactId>
-	<packaging>jar</packaging>
-	<version>0.9.5</version><!-- bumpversion -->
-	<name>java-jsi-clus-pct-ts</name>
-
-	<properties>
-		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
-		<jdk.version>1.8</jdk.version>
-		<compiler.plugin.version>3.7.0</compiler.plugin.version>
-		<jar.plugin.version>3.0.2</jar.plugin.version>
-		<surefire.plugin.version>2.19</surefire.plugin.version>
-		<site.plugin.version>3.7</site.plugin.version>
-		<info.reports.plugin.version>2.9</info.reports.plugin.version>
-		<surefire.report.plugin.version>2.20</surefire.report.plugin.version>
-		<jxr.plugin.version>2.5</jxr.plugin.version>
-		<hadrian.version>0.8.5</hadrian.version>
-		<junit.version>5.0.0</junit.version>
-		<postgres.version>9.4.1212.jre7</postgres.version>
-		<jackson.version>2.7.0</jackson.version>
-		<mip.adapter.version>0.5.7</mip.adapter.version>
-		<clus.version>1.0.0</clus.version>
-		<jsi-clus.version>0.4.1</jsi-clus.version>
-	</properties>
-
-
-	<repositories>
-		<repository>
-			<id>maven</id>
-			<url>https://repo.maven.apache.org/maven2</url>
-			<name>Central Maven repository</name>
-		</repository>
-
-		<repository>
-			<id>opendatagroup</id>
-			<url>http://repository.opendatagroup.com/maven</url>
-			<name>Repository for Hadrian</name>
-		</repository>
-
-		<repository>
-			<snapshots>
-				<enabled>false</enabled>
-			</snapshots>
-			<id>bintray-hbpmedical-mip</id>
-			<name>bintray</name>
-			<url>https://dl.bintray.com/hbpmedical/maven</url>
-		</repository>
-	</repositories>
-
-	<dependencies>
-		<dependency>
-			<groupId>eu.humanbrainproject.mip.algorithms</groupId>
-			<artifactId>adapter</artifactId>
-			<version>${mip.adapter.version}</version>
-		</dependency>
-
-		<dependency>
-			<groupId>eu.humanbrainproject.mip.algorithms</groupId>
-			<artifactId>jsi-clus</artifactId>
-			<version>${jsi-clus.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>si.ijs.kt</groupId>
-			<artifactId>clus</artifactId>
-			<version>${clus.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.junit.jupiter</groupId>
-			<artifactId>junit-jupiter-api</artifactId>
-			<version>${junit.version}</version>
-			<scope>test</scope>
-		</dependency>
-
-		<dependency>
-			<groupId>com.opendatagroup</groupId>
-			<artifactId>hadrian</artifactId>
-			<version>${hadrian.version}</version>
-			<scope>test</scope>
-		</dependency>
-
-		<dependency>
-			<groupId>org.postgresql</groupId>
-			<artifactId>postgresql</artifactId>
-			<version>${postgres.version}</version>
-		</dependency>
-
-		<dependency>
-			<groupId>com.fasterxml.jackson.core</groupId>
-			<artifactId>jackson-core</artifactId>
-			<version>${jackson.version}</version>
-		</dependency>
-	</dependencies>
-
-
-
-
-	<build>
-		<finalName>${project.artifactId}</finalName>
-		<testResources>
-			<testResource>
-				<directory>src/test/java</directory>
-				<includes>
-					<include>**/*.csv</include>
-					<include>**/*.json</include>
-				</includes>
-				<filtering>false</filtering>
-			</testResource>
-		</testResources>
-		<plugins>
-			<plugin>
-				<groupId>org.apache.maven.plugins</groupId>
-				<artifactId>maven-compiler-plugin</artifactId>
-				<version>${compiler.plugin.version}</version>
-				<configuration>
-					<source>${jdk.version}</source>
-					<target>${jdk.version}</target>
-				</configuration>
-			</plugin>
-			<plugin>
-				<groupId>org.apache.maven.plugins</groupId>
-				<artifactId>maven-jar-plugin</artifactId>
-				<version>${jar.plugin.version}</version>
-			</plugin>
-			<plugin>
-				<groupId>org.apache.maven.plugins</groupId>
-				<artifactId>maven-surefire-plugin</artifactId>
-				<version>${surefire.plugin.version}</version>
-				<!-- lock down our surefire provider -->
-				<dependencies>
-					<dependency>
-						<groupId>org.junit.platform</groupId>
-						<artifactId>junit-platform-surefire-provider</artifactId>
-						<version>1.0.0</version>
-					</dependency>
-					<dependency>
-						<groupId>org.junit.jupiter</groupId>
-						<artifactId>junit-jupiter-engine</artifactId>
-						<version>5.0.0</version>
-					</dependency>
-				</dependencies>
-			</plugin>
-			<plugin>
-				<groupId>org.apache.maven.plugins</groupId>
-				<artifactId>maven-site-plugin</artifactId>
-				<version>${site.plugin.version}</version>
-			</plugin>
-		</plugins>
-	</build>
-
-	<reporting>
-		<plugins>
-			<plugin>
-				<groupId>org.apache.maven.plugins</groupId>
-				<artifactId>maven-project-info-reports-plugin</artifactId>
-				<version>${info.reports.plugin.version}</version>
-			</plugin>
-			<plugin>
-				<groupId>org.apache.maven.plugins</groupId>
-				<artifactId>maven-surefire-report-plugin</artifactId>
-				<version>${surefire.report.plugin.version}</version>
-			</plugin>
-			<plugin>
-				<groupId>org.apache.maven.plugins</groupId>
-				<artifactId>maven-jxr-plugin</artifactId>
-				<version>${jxr.plugin.version}</version>
-			</plugin>
-		</plugins>
-	</reporting>
-	
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+
+	<groupId>eu.humanbrainproject.mip.algorithms.jsi</groupId>
+	<artifactId>jsi-clus-pct-ts</artifactId>
+	<packaging>jar</packaging>
+	<version>0.9.5</version><!-- bumpversion -->
+	<name>java-jsi-clus-pct-ts</name>
+
+	<properties>
+		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
+		<jdk.version>1.8</jdk.version>
+		<compiler.plugin.version>3.7.0</compiler.plugin.version>
+		<jar.plugin.version>3.0.2</jar.plugin.version>
+		<surefire.plugin.version>2.19</surefire.plugin.version>
+		<site.plugin.version>3.7</site.plugin.version>
+		<info.reports.plugin.version>2.9</info.reports.plugin.version>
+		<surefire.report.plugin.version>2.20</surefire.report.plugin.version>
+		<jxr.plugin.version>2.5</jxr.plugin.version>
+		<hadrian.version>0.8.5</hadrian.version>
+		<junit.version>5.0.0</junit.version>
+		<postgres.version>9.4.1212.jre7</postgres.version>
+		<jackson.version>2.15.0</jackson.version>
+		<mip.adapter.version>0.5.7</mip.adapter.version>
+		<clus.version>1.0.0</clus.version>
+		<jsi-clus.version>0.4.1</jsi-clus.version>
+	</properties>
+
+
+	<repositories>
+		<repository>
+			<id>maven</id>
+			<url>https://repo.maven.apache.org/maven2</url>
+			<name>Central Maven repository</name>
+		</repository>
+
+		<repository>
+			<id>opendatagroup</id>
+			<url>http://repository.opendatagroup.com/maven</url>
+			<name>Repository for Hadrian</name>
+		</repository>
+
+		<repository>
+			<snapshots>
+				<enabled>false</enabled>
+			</snapshots>
+			<id>bintray-hbpmedical-mip</id>
+			<name>bintray</name>
+			<url>https://dl.bintray.com/hbpmedical/maven</url>
+		</repository>
+	</repositories>
+
+	<dependencies>
+		<dependency>
+			<groupId>eu.humanbrainproject.mip.algorithms</groupId>
+			<artifactId>adapter</artifactId>
+			<version>${mip.adapter.version}</version>
+		</dependency>
+
+		<dependency>
+			<groupId>eu.humanbrainproject.mip.algorithms</groupId>
+			<artifactId>jsi-clus</artifactId>
+			<version>${jsi-clus.version}</version>
+		</dependency>
+		<dependency>
+			<groupId>si.ijs.kt</groupId>
+			<artifactId>clus</artifactId>
+			<version>${clus.version}</version>
+		</dependency>
+		<dependency>
+			<groupId>org.junit.jupiter</groupId>
+			<artifactId>junit-jupiter-api</artifactId>
+			<version>${junit.version}</version>
+			<scope>test</scope>
+		</dependency>
+
+		<dependency>
+			<groupId>com.opendatagroup</groupId>
+			<artifactId>hadrian</artifactId>
+			<version>${hadrian.version}</version>
+			<scope>test</scope>
+		</dependency>
+
+		<dependency>
+			<groupId>org.postgresql</groupId>
+			<artifactId>postgresql</artifactId>
+			<version>${postgres.version}</version>
+		</dependency>
+
+		<dependency>
+			<groupId>com.fasterxml.jackson.core</groupId>
+			<artifactId>jackson-core</artifactId>
+			<version>${jackson.version}</version>
+		</dependency>
+	</dependencies>
+
+
+
+
+	<build>
+		<finalName>${project.artifactId}</finalName>
+		<testResources>
+			<testResource>
+				<directory>src/test/java</directory>
+				<includes>
+					<include>**/*.csv</include>
+					<include>**/*.json</include>
+				</includes>
+				<filtering>false</filtering>
+			</testResource>
+		</testResources>
+		<plugins>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-compiler-plugin</artifactId>
+				<version>${compiler.plugin.version}</version>
+				<configuration>
+					<source>${jdk.version}</source>
+					<target>${jdk.version}</target>
+				</configuration>
+			</plugin>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-jar-plugin</artifactId>
+				<version>${jar.plugin.version}</version>
+			</plugin>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-surefire-plugin</artifactId>
+				<version>${surefire.plugin.version}</version>
+				<!-- lock down our surefire provider -->
+				<dependencies>
+					<dependency>
+						<groupId>org.junit.platform</groupId>
+						<artifactId>junit-platform-surefire-provider</artifactId>
+						<version>1.0.0</version>
+					</dependency>
+					<dependency>
+						<groupId>org.junit.jupiter</groupId>
+						<artifactId>junit-jupiter-engine</artifactId>
+						<version>5.0.0</version>
+					</dependency>
+				</dependencies>
+			</plugin>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-site-plugin</artifactId>
+				<version>${site.plugin.version}</version>
+			</plugin>
+		</plugins>
+	</build>
+
+	<reporting>
+		<plugins>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-project-info-reports-plugin</artifactId>
+				<version>${info.reports.plugin.version}</version>
+			</plugin>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-surefire-report-plugin</artifactId>
+				<version>${surefire.report.plugin.version}</version>
+			</plugin>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-jxr-plugin</artifactId>
+				<version>${jxr.plugin.version}</version>
+			</plugin>
+		</plugins>
+	</reporting>
+	
 </project>