diff --git a/.github/workflows/non_regression.yml b/.github/workflows/non_regression.yml
index 1cfe7e4..6c39f1e 100644
--- a/.github/workflows/non_regression.yml
+++ b/.github/workflows/non_regression.yml
@@ -39,7 +39,7 @@ jobs:
         run: |
           cd tests
           V=1 make -j`nproc --all`
-          ./build/TimedPetriNetEditor-UnitTest
+          ../build/TimedPetriNetEditor-UnitTest
       - name: Check if the library can be linked against a project
         run: |
           export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/lib/
@@ -63,7 +63,7 @@ jobs:
         run: |
           make download-external-libs
           make compile-external-libs
-          make -j`sysctl -n hw.logicalcpu`
+          V=1 make -j`sysctl -n hw.logicalcpu`
       - name: Download, configure and install Google test
         run: |
           wget https://github.com/google/googletest/archive/release-1.11.0.tar.gz
@@ -74,8 +74,8 @@ jobs:
       - name: Do non regression tests
         run: |
           cd tests
-          make -j`sysctl -n hw.logicalcpu`
-          ./build/TimedPetriNetEditor-UnitTest
+          V=1 check -j`sysctl -n hw.logicalcpu`
+          ../build/TimedPetriNetEditor-UnitTest
       - name: Create the DMG file
         run: |
           hdiutil create -format UDZO -srcfolder build/TimedPetriNetEditor.app build/TimedPetriNetEditor.dmg
diff --git a/.makefile b/.makefile
index 07ac6fe..59409f5 160000
--- a/.makefile
+++ b/.makefile
@@ -1 +1 @@
-Subproject commit 07ac6fe3a2b642d358d86ee007d26bf546d60e70
+Subproject commit 59409f5c5d4d6fd0b39b317bc358ebc8458ccb3d
diff --git a/Makefile b/Makefile
index 1ecfd0d..6ca3cd4 100644
--- a/Makefile
+++ b/Makefile
@@ -1,3 +1,23 @@
+##=====================================================================
+## TimedPetriNetEditor: A timed Petri net editor.
+## Copyright 2021 -- 2023 Quentin Quadrat <lecrapouille@gmail.com>
+##
+## This file is part of PetriEditor.
+##
+## PetriEditor is free software: you can redistribute it and/or modify it
+## under the terms of the GNU General Public License as published by
+## the Free Software Foundation, either version 3 of the License, or
+## (at your option) any later version.
+##
+## This program is distributed in the hope that it will be useful, but
+## WITHOUT ANY WARRANTY; without even the implied warranty of
+## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+## General Public License for more details.
+##
+## You should have received a copy of the GNU General Public License
+## along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.
+##=====================================================================
+
 ###################################################
 # Location of the project directory and Makefiles
 #
@@ -8,93 +28,69 @@ M := $(P)/.makefile
 # Project definition
 #
 include $(P)/Makefile.common
-TARGET = $(PROJECT)
-DESCRIPTION = Timed Petri Net Editor
+TARGET_NAME := $(PROJECT_NAME)
+TARGET_DESCRIPTION := Timed Petri Net Editor
+include $(M)/project/Makefile
 
 ###################################################
-# Sharable informations between all Makefiles
+# Standalone application
 #
-include $(M)/Makefile.header
-
-###################################################
-# OpenGL: glfw and glew libraries
+SRC_FILES := src/main.cpp
+INCLUDES := $(P)/include
+VPATH := $(P)/src
+# Internal libs to compile
+LIB_TPNE_NET := TimedPetriNet
+LIB_TPNE_EDITOR := TimedPetriEditor
+LIB_TPNE_JULIA := TimedPetriJulia
+INTERNAL_LIBS := $(LIB_TPNE_EDITOR) $(LIB_TPNE_NET) $(LIB_TPNE_JULIA)
+DIRS_WITH_MAKEFILE := $(P)/src/Net $(P)/src/Editor $(P)/src/julia
+
+###################################################
+# GUI
 #
-ifeq ($(ARCHI),Darwin)
-    INCLUDES += -I/usr/local/include -I/opt/local/include
-    LINKER_FLAGS += -framework OpenGL -framework Cocoa
-    LINKER_FLAGS += -framework IOKit -framework CoreVideo
-    LINKER_FLAGS += -L/usr/local/lib -L/opt/local/lib
-    LINKER_FLAGS += -lGLEW -lglfw
-else ifeq ($(ARCHI),Linux)
-    LINKER_FLAGS += -lGL
-    PKG_LIBS += --static glfw3
-else ifeq ($(ARCHI),Emscripten)
-    ifneq ($(EXAEQUOS),)
-        LINKER_FLAGS += -sMIN_WEBGL_VERSION=2 -sMAX_WEBGL_VERSION=2 -sFULL_ES3
-        PKG_LIBS += exa-wayland --static glfw
-    endif
-else
-    $(error Unknown architecture $(ARCHI) for OpenGL)
-endif
+include $(abspath $(P)/src/Editor/DearImGui/Backends/Makefile)
+THIRDPART_LIBS :=
+LINKER_FLAGS += -ldl -lpthread
+INCLUDES += $(P)/src/Editor/DearImGui
+INCLUDES += $(P)/src
 
 ###################################################
 # Embed assets for web version. Assets shall be
 # present inside $(BUILD) folder.
 #
-ifeq ($(ARCHI),Emscripten)
-ifeq ($(EXAEQUOS),)
-LINKER_FLAGS += --preload-file examples
-LINKER_FLAGS += --preload-file data
-LINKER_FLAGS += -s FORCE_FILESYSTEM=1
-endif
-endif
-
-###################################################
-# Create a MacOS X bundle application.
-#
-ifeq ($(ARCHI),Darwin)
-BUILD_MACOS_APP_BUNDLE = 1
-APPLE_IDENTIFIER = lecrapouille
-MACOS_BUNDLE_ICON = data/TimedPetriNetEditor.icns
-LINKER_FLAGS += -framework CoreFoundation
+ifeq ($(OS),Emscripten)
+    ifndef EXAEQUOS
+        # Install the folder data in the Emscripten filesystem
+        LINKER_FLAGS += --preload-file $(PROJECT_DATA_DIR)
+        LINKER_FLAGS += -s FORCE_FILESYSTEM=1
+        # Add this flag ONLY in case we are using ASYNCIFY code
+        LINKER_FLAGS += -s ASYNCIFY
+        # For linking glfwGetProcAddress().
+        LINKER_FLAGS += -s GL_ENABLE_GET_PROC_ADDRESS
+    endif
 endif
 
 ###################################################
-# Stand-alone application.
+# Generic Makefile rules
 #
-include $(P)/src/Editor/DearImGui/Makefile.imgui
-LINKER_FLAGS += -ldl -lpthread
-VPATH += $(P)/include $(P)/src $(P)/src/Utils $(P)/src/Net
-VPATH += $(P)/src/Net/Imports VPATH += $(P)/src/Net/Exports
-INCLUDES += -I$(P)/include -I$(P)/src -I$(P)/external
-OBJS += main.o
-
-###################################################
-# Compile the stand-alone application
-.PHONY: all
-all: $(TARGET) copy-emscripten-assets
+include $(M)/rules/Makefile
 
 ###################################################
-# Internal libraries
+# Compile internal librairies in the correct order
 #
-LIB_TPNE_CORE = $(abspath $(P)/$(BUILD)/libtimedpetrinetcore.a)
-LIB_TPNE_GUI = $(abspath $(P)/$(BUILD)/libtimedpetrinetgui.a)
-LIB_TPNE_JULIA = $(abspath $(P)/$(BUILD)/libtimedpetrinetjulia.a)
-THIRDPART_LIBS += $(LIB_TPNE_CORE) $(LIB_TPNE_GUI) $(LIB_TPNE_JULIA)
-DIRS_WITH_MAKEFILE := src/Editor src/Net src/julia
-
-$(LIB_TPNE_GUI): src/Editor
+$(LIB_TPNE_NET): $(P)/src/Net
 
-$(LIB_TPNE_CORE): src/Net
+$(LIB_TPNE_EDITOR): $(P)/src/Editor
 
-$(LIB_TPNE_JULIA): src/julia
+$(LIB_TPNE_JULIA): $(P)/src/julia
 
-src/julia: src/Editor
+$(P)/src/julia: $(P)/src/Editor
 
-src/Editor: src/Net
+$(P)/src/Editor: $(P)/src/Net
 
 ###################################################
 # Copy data inside BUILD to allow emscripten to embedded them
+#
 .PHONY: copy-assets
 copy-emscripten-assets: | $(BUILD)
 ifeq ($(ARCHI),Emscripten)
@@ -104,51 +100,4 @@ ifeq ($(ARCHI),Emscripten)
 	@cp $(P)/data/examples/*.json $(BUILD)/examples
 	@cp $(P)/data/font.ttf $(BUILD)/data
 	@cp $(P)/data/imgui.ini $(BUILD)/data
-endif
-
-###################################################
-# Compile and launch unit tests and generate the code coverage html report.
-.PHONY: unit-tests
-unit-tests:
-	@$(call print-simple,"Compiling unit tests")
-	@$(MAKE) -C tests coverage
-
-###################################################
-# Compile and launch unit tests and generate the code coverage html report.
-.PHONY: check
-check: unit-tests
-
-###################################################
-# Install project. You need to be root.
-.PHONY: install
-install: $(TARGET)
-	@$(call INSTALL_BINARY)
-ifeq ($(EXAEQUOS),)
-	@$(MAKE) --no-print-directory -C src/Net install
-	@$(MAKE) --no-print-directory -C src/Editor install
-	@$(MAKE) --no-print-directory -C src/julia install
-	@$(call INSTALL_DOCUMENTATION)
-	@$(call INSTALL_PROJECT_HEADERS)
-endif
-
-###################################################
-# Clean the whole project.
-.PHONY: veryclean
-veryclean: clean
-	@rm -fr cov-int $(PROJECT).tgz *.log foo 2> /dev/null
-	@(cd tests && $(MAKE) -s clean)
-	@$(call print-simple,"Cleaning","$(PWD)/doc/html")
-	@rm -fr $(THIRDPART)/*/ doc/html 2> /dev/null
-
-###################################################
-# Sharable informations between all Makefiles
-#
-include $(M)/Makefile.footer
-
-###################################################
-# Override clean the project
-.PHONY: clean
-clean::
-	@$(MAKE) --no-print-directory -C src/Net clean
-	@$(MAKE) --no-print-directory -C src/Editor clean
-	@$(MAKE) --no-print-directory -C src/julia clean
\ No newline at end of file
+endif
\ No newline at end of file
diff --git a/Makefile.common b/Makefile.common
index 1a79450..76bf2a8 100644
--- a/Makefile.common
+++ b/Makefile.common
@@ -1,23 +1,12 @@
 ###################################################
 # Project definition
 #
-PROJECT = TimedPetriNetEditor
-STANDARD = --std=c++14
-BUILD_TYPE = release
+PROJECT_NAME := TimedPetriNetEditor
+PROJECT_VERSION := 0.4.0
+COMPILATION_MODE := release
+CXX_STANDARD := --std=c++14
 
 ###################################################
 # Select the Dear ImGui backend: RayLib or GLFW3.
 #
-DEAR_IMGUI_BACKEND ?= RayLib
-
-###################################################
-# Reduce warnings
-#
-CCFLAGS += -Wno-sign-conversion -Wno-float-equal
-CXXFLAGS += -Wno-undef -Wno-switch-enum -Wno-enum-compare
-CXXFLAGS += -Wshadow
-
-###################################################
-# Project defines
-#
-DEFINES += -DDATADIR=\"$(DATADIR):$(abspath $(P))/data/:data/\"
\ No newline at end of file
+DEAR_IMGUI_BACKEND ?= RayLib
\ No newline at end of file
diff --git a/VERSION.txt b/VERSION.txt
deleted file mode 100644
index 1d0ba9e..0000000
--- a/VERSION.txt
+++ /dev/null
@@ -1 +0,0 @@
-0.4.0
diff --git a/external/compile-external-libs.sh b/external/compile-external-libs.sh
index ea607dc..3324bae 100755
--- a/external/compile-external-libs.sh
+++ b/external/compile-external-libs.sh
@@ -27,7 +27,7 @@
 ### $CXX: C++ compiler
 ###############################################################################
 
-source ../.makefile/compile-external-libs.sh
+source $1
 
 ### Library raylib
 print-compile raylib
@@ -39,11 +39,11 @@ print-compile raylib
  # Note: Concerning .backup see https://www.themoderncoder.com/fix-sed-i-error-macos/
  sed -i.backup 's/ExportImage(image, path)/ExportImage(image, fileName)/g' rcore.c
 
- mkdir -p $ARCHI
+ mkdir -p $OS
  call-make clean
- if [ "$ARCHI" != "Emscripten" ]; then
-   call-make PLATFORM=PLATFORM_DESKTOP RAYLIB_RELEASE_PATH=$ARCHI RAYLIB_BUILD_MODE=DEBUG
+ if [ "$OS" != "Emscripten" ]; then
+   call-make PLATFORM=PLATFORM_DESKTOP RAYLIB_RELEASE_PATH=$OS RAYLIB_BUILD_MODE=DEBUG
  else
-   call-make PLATFORM=PLATFORM_WEB RAYLIB_RELEASE_PATH=$ARCHI
+   call-make PLATFORM=PLATFORM_WEB RAYLIB_RELEASE_PATH=$OS
  fi
 )
diff --git a/external/download-external-libs.sh b/external/download-external-libs.sh
index 1235ca3..438c087 100755
--- a/external/download-external-libs.sh
+++ b/external/download-external-libs.sh
@@ -5,7 +5,7 @@
 ### It replaces git submodules that I dislike.
 ###############################################################################
 
-source ../.makefile/download-external-libs.sh
+source $1
 
 ### Dear ImGui: Bloat-free Graphical User interface for C++ with minimal dependencies
 ### License: MIT
diff --git a/src/Editor/DearImGui/Backends/GLFW3/Application.hpp b/src/Editor/DearImGui/Backends/GLFW3/Application.hpp
index e4b04e5..eabee05 100644
--- a/src/Editor/DearImGui/Backends/GLFW3/Application.hpp
+++ b/src/Editor/DearImGui/Backends/GLFW3/Application.hpp
@@ -21,12 +21,12 @@
 #ifndef APPLICATION_HPP
 #  define APPLICATION_HPP
 
-#include "imgui.h"
+#include "imgui/imgui.h"
 #include "imgui_impl_glfw.h"
 #include "imgui_impl_opengl3.h"
 #include "imgui/misc/cpp/imgui_stdlib.h"
-#include "implot.h"
-#include "ImGuiFileDialog.h"
+#include "implot/implot.h"
+#include "ImGuiFileDialog/ImGuiFileDialog.h"
 #include <GLFW/glfw3.h>
 
 //------------------------------------------------------------------------------
diff --git a/src/Editor/DearImGui/Backends/Makefile b/src/Editor/DearImGui/Backends/Makefile
new file mode 100644
index 0000000..c303d1e
--- /dev/null
+++ b/src/Editor/DearImGui/Backends/Makefile
@@ -0,0 +1,108 @@
+###################################################
+# If compiling for HTML5 (Emscripten) then force
+# using Raylib backend since GLFW3 is not compilable.
+#
+ifeq ($(OS),Emscripten)
+    ifdef EXAEQUOS
+        ifneq ($(DEAR_IMGUI_BACKEND),GLFW3)
+            $(warning Force GLFW3 backend for compiling with ExaequOS)
+            DEAR_IMGUI_BACKEND = GLFW3
+        endif
+    else
+        ifneq ($(DEAR_IMGUI_BACKEND),RayLib)
+            $(warning Force RayLib backend for compiling with Emscripten)
+            DEAR_IMGUI_BACKEND = RayLib
+        endif
+    endif
+endif
+
+###################################################
+# Dear ImGui backends: GLFW3
+#
+ifeq ($(DEAR_IMGUI_BACKEND),GLFW3)
+    INCLUDES += $(P)/src/Editor/DearImGui/Backends/GLFW3
+    GUI_FILES += $(P)/src/Editor/DearImGui/Backends/GLFW3/Application.cpp
+    INCLUDES += $(THIRDPART_DIR)/imgui/backends/
+    GUI_FILES += $(THIRDPART_DIR)/imgui/backends/imgui_impl_glfw.cpp
+    GUI_FILES += $(THIRDPART_DIR)/imgui/backends/imgui_impl_opengl3.cpp
+    ifeq ($(OS),Linux)
+        # OpenGL, GLEW, GLFW3
+        LINKER_FLAGS += -lGL
+        PKG_LIBS += --static glfw3
+    else ifeq ($(OS),Darwin)
+        # OpenGL, GLEW, GLFW3
+        INCLUDES += -I/usr/local/include -I/opt/local/include
+        LINKER_FLAGS += -framework OpenGL -framework Cocoa
+        LINKER_FLAGS += -framework IOKit -framework CoreVideo
+        LINKER_FLAGS += -L/usr/local/lib -L/opt/local/lib
+        LINKER_FLAGS += -lGLEW -lglfw
+    else ifeq ($(OS),Emscripten)
+        ifdef EXAEQUOS
+            # Wayland, OpenGL, GLEW, GLFW3 for ExaequOS
+            LINKER_FLAGS += -sMIN_WEBGL_VERSION=2 -sMAX_WEBGL_VERSION=2 -sFULL_ES3
+            PKG_LIBS += exa-wayland --static glfw
+        else
+            # We tell the linker that the game/library uses GLFW3
+            # library internally, it must be linked automatically
+            # (emscripten provides the implementation)
+            LINKER_FLAGS += -s USE_GLFW=3
+        endif
+    else
+        $(error Unknown architecture $(OS) for OpenGL)
+    endif
+    USER_CXXFLAGS := -Wno-old-style-cast -Wno-sign-conversion -Wno-float-equal
+    USER_CXXFLAGS += -Wno-cast-qual -Wno-conversion
+endif
+
+###################################################
+# Dear ImGui backends: Raylib
+#
+ifeq ($(DEAR_IMGUI_BACKEND),RayLib)
+    VPATH += $(P)/src/Editor/DearImGui
+    VPATH += $(P)/src/Editor/DearImGui/Backends/RayLib
+    INCLUDES += $(P)/src/Editor/DearImGui/Backends/RayLib
+    GUI_FILES += $(P)/src/Editor/DearImGui/Backends/RayLib/Application.cpp
+    VPATH += $(THIRDPART_DIR)/rlImGui
+    INCLUDES += $(THIRDPART_DIR)/rlImGui
+    GUI_FILES += $(THIRDPART_DIR)/rlImGui/rlImGui.cpp
+    INCLUDES += $(THIRDPART_DIR)/raylib/src
+    THIRDPART_LIBS += $(THIRDPART_DIR)/raylib/src/$(OS)/libraylib.a
+    ifeq ($(OS),Emscripten)
+        ifdef EXAEQUOS
+            LINKER_FLAGS += -sMIN_WEBGL_VERSION=2 -sMAX_WEBGL_VERSION=2 -sFULL_ES3
+            PKG_LIBS += exa-wayland --static raylib
+        else
+            # We tell the linker that the game/library uses GLFW3
+            # library internally, it must be linked automatically
+            # (emscripten provides the implementation)
+            LINKER_FLAGS += -s USE_GLFW=3
+            # All webs need a "shell" structure to load and run the game,
+            # by default emscripten has a `shell.html` but we can provide
+            # our own.
+            LINKER_FLAGS += --shell-file $(THIRDPART_DIR)/raylib/src/minshell.html
+        endif
+    endif
+
+    USER_CXXFLAGS := -Wno-conversion -Wno-sign-conversion -Wno-float-equal -Wno-old-style-cast
+    USER_CXXFLAGS += -Wno-cast-qual -Wno-undef
+endif
+
+# Dear ImGui
+INCLUDES += $(THIRDPART_DIR)
+INCLUDES += $(THIRDPART_DIR)/imgui
+GUI_FILES += $(THIRDPART_DIR)/imgui/imgui_widgets.cpp
+GUI_FILES += $(THIRDPART_DIR)/imgui/imgui_draw.cpp
+GUI_FILES += $(THIRDPART_DIR)/imgui/imgui_tables.cpp
+GUI_FILES += $(THIRDPART_DIR)/imgui/imgui.cpp
+GUI_FILES += $(THIRDPART_DIR)/imgui/misc/cpp/imgui_stdlib.cpp
+
+# Dear ImGui plot
+GUI_FILES += $(THIRDPART_DIR)/implot/implot_items.cpp
+GUI_FILES += $(THIRDPART_DIR)/implot/implot.cpp
+
+# Dear ImGui file dialog
+GUI_FILES += $(THIRDPART_DIR)/ImGuiFileDialog/ImGuiFileDialog.cpp
+USER_CXXFLAGS += -Wno-unknown-pragmas
+
+# Petri Editor
+GUI_FILES += $(call wildcard,$(P)/src/Editor/DearImGui/*.cpp)
\ No newline at end of file
diff --git a/src/Editor/DearImGui/Backends/RayLib/Application.hpp b/src/Editor/DearImGui/Backends/RayLib/Application.hpp
index d1a9734..5070342 100644
--- a/src/Editor/DearImGui/Backends/RayLib/Application.hpp
+++ b/src/Editor/DearImGui/Backends/RayLib/Application.hpp
@@ -24,11 +24,11 @@
 #include "raylib.h"
 #include "imgui_impl_raylib.h"
 #include "imgui/misc/cpp/imgui_stdlib.h"
-#include "imgui.h"
-#include "implot.h"
-#include "ImGuiFileDialog.h"
-#include "rlImGui.h"
-#include "DearUtils.hpp"
+#include "imgui/imgui.h"
+#include "implot/implot.h"
+#include "ImGuiFileDialog/ImGuiFileDialog.h"
+#include "rlImGui/rlImGui.h"
+#include "Editor/DearImGui/DearUtils.hpp"
 
 #include <string>
 #include <functional>
diff --git a/src/Editor/DearImGui/Drawable.cpp b/src/Editor/DearImGui/Drawable.cpp
index 8e76a32..a030361 100644
--- a/src/Editor/DearImGui/Drawable.cpp
+++ b/src/Editor/DearImGui/Drawable.cpp
@@ -20,7 +20,7 @@
 
 #include "Editor/DearImGui/Drawable.hpp"
 #include "Editor/DearImGui/DearUtils.hpp"
-#include "implot.h"
+#include "implot/implot.h"
 #include "Utils/Utils.hpp"
 #include <iomanip> // std::setprecision
 
diff --git a/src/Editor/DearImGui/Drawable.hpp b/src/Editor/DearImGui/Drawable.hpp
index 7190632..a3c57e6 100644
--- a/src/Editor/DearImGui/Drawable.hpp
+++ b/src/Editor/DearImGui/Drawable.hpp
@@ -23,7 +23,7 @@
 
 #  include "Editor/DearImGui/Theme.hpp"
 #  include "TimedPetriNetEditor/PetriNet.hpp"
-#  include "imgui.h"
+#  include "imgui/imgui.h"
 
 namespace tpne {
 
diff --git a/src/Editor/DearImGui/Editor.cpp b/src/Editor/DearImGui/Editor.cpp
index ac74cc0..b528085 100644
--- a/src/Editor/DearImGui/Editor.cpp
+++ b/src/Editor/DearImGui/Editor.cpp
@@ -667,7 +667,7 @@ void Editor::about() const
         ImGui::Text("Git branch: %s", project::info::git_branch.c_str());
         ImGui::Text("Git SHA1: %s", project::info::git_sha1.c_str());
         ImGui::Text("Compiled as %s",
-                    (project::info::mode == project::info::Mode::debug)
+                    (project::info::compilation::mode == project::info::compilation::Mode::debug)
                     ? "Debug" : "Release");
         ImGui::Separator();
         ImGui::Text("Developed by Quentin Quadrat");
diff --git a/src/Editor/DearImGui/Makefile.imgui b/src/Editor/DearImGui/Makefile.imgui
deleted file mode 100644
index 9ace05d..0000000
--- a/src/Editor/DearImGui/Makefile.imgui
+++ /dev/null
@@ -1,91 +0,0 @@
-###################################################
-# If compiling for HTML5 (Emscripten) then force
-# using Raylib backend since GLFW3 is not compilable.
-#
-ifeq ($(ARCHI),Emscripten)
-  ifneq ($(EXAEQUOS),)
-    ifneq ($(DEAR_IMGUI_BACKEND),GLFW3)
-       $(warning Force GLFW3 backend for compiling with ExaequOS)
-       DEAR_IMGUI_BACKEND = GLFW3
-    endif
-  else
-    ifneq ($(DEAR_IMGUI_BACKEND),RayLib)
-      $(warning Force RayLib backend for compiling with Emscripten)
-      DEAR_IMGUI_BACKEND = RayLib
-    endif
-  endif
-endif
-
-###################################################
-# Set thirdpart Raylib
-#
-ifeq ($(DEAR_IMGUI_BACKEND),RayLib)
-INCLUDES += -I$(THIRDPART)/raylib/src
-THIRDPART_LIBS += $(abspath $(THIRDPART)/raylib/src/$(ARCHI)/libraylib.a)
-ifeq ($(ARCHI),Emscripten)
-# We tell the linker that the game/library uses GLFW3
-# library internally, it must be linked automatically
-# (emscripten provides the implementation)
-LINKER_FLAGS += -s USE_GLFW=3
-# Add this flag ONLY in case we are using ASYNCIFY code
-LINKER_FLAGS += -s ASYNCIFY
-# For linking glfwGetProcAddress().
-LINKER_FLAGS += -s GL_ENABLE_GET_PROC_ADDRESS
-# All webs need a "shell" structure to load and run the game,
-# by default emscripten has a `shell.html` but we can provide
-# our own.
-LINKER_FLAGS += --shell-file $(THIRDPART)/raylib/src/shell.html
-endif
-endif
-
-###################################################
-# Dear ImGui backends: Raylib
-#
-ifeq ($(DEAR_IMGUI_BACKEND),RayLib)
-VPATH += $(THIRDPART)/rlImGui
-VPATH += $(P)/src/Editor/DearImGui/Backends/RayLib
-INCLUDES += -I$(THIRDPART)/rlImGui
-INCLUDES += -I$(P)/src/Editor/DearImGui/Backends/RayLib
-GUI_OBJS += rlImGui.o
-endif
-
-###################################################
-# Dear ImGui backends: OpenGL/GLFW3
-#
-ifeq ($(DEAR_IMGUI_BACKEND),GLFW3)
-ifneq ($(EXAEQUOS),)
-PKG_LIBS += --static glfw
-endif
-VPATH += $(P)/src/Editor/DearImGui/Backends/GLFW3
-INCLUDES += -I$(P)/src/Editor/DearImGui/Backends/GLFW3
-GUI_OBJS += imgui_impl_glfw.o imgui_impl_opengl3.o
-endif
-
-###################################################
-# Editor using Dear ImGui for the human interface.
-#
-VPATH += $(P)/src/Editor/DearImGui
-INCLUDES += -I$(P)/src/Editor/DearImGui
-GUI_OBJS += Theme.o DearUtils.o
-
-###################################################
-# Editor using Dear ImGui for the human interface.
-#
-INCLUDES += -I$(THIRDPART)/imgui -I$(THIRDPART)/imgui/backends -I$(THIRDPART)/imgui/misc/cpp
-VPATH += $(THIRDPART)/imgui $(THIRDPART)/imgui/backends $(THIRDPART)/imgui/misc/cpp
-GUI_OBJS += imgui_widgets.o imgui_draw.o imgui_tables.o imgui.o imgui_stdlib.o
-# GUI_OBJS += imgui_demo.o
-
-###################################################
-# Set thirdpart Dear ImGui Plot
-#
-VPATH += $(THIRDPART)/implot
-INCLUDES += -I$(THIRDPART)/implot
-GUI_OBJS += implot_items.o implot.o
-
-###################################################
-# Set thirdpart file dialog
-#
-VPATH += $(THIRDPART)/ImGuiFileDialog
-INCLUDES += -I$(THIRDPART)/ImGuiFileDialog
-GUI_OBJS += ImGuiFileDialog.o
\ No newline at end of file
diff --git a/src/Editor/Makefile b/src/Editor/Makefile
index e606442..8c881d1 100644
--- a/src/Editor/Makefile
+++ b/src/Editor/Makefile
@@ -1,48 +1,49 @@
+##=====================================================================
+## TimedPetriNetEditor: A timed Petri net editor.
+## Copyright 2021 -- 2023 Quentin Quadrat <lecrapouille@gmail.com>
+##
+## This file is part of PetriEditor.
+##
+## PetriEditor is free software: you can redistribute it and/or modify it
+## under the terms of the GNU General Public License as published by
+## the Free Software Foundation, either version 3 of the License, or
+## (at your option) any later version.
+##
+## This program is distributed in the hope that it will be useful, but
+## WITHOUT ANY WARRANTY; without even the implied warranty of
+## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+## General Public License for more details.
+##
+## You should have received a copy of the GNU General Public License
+## along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.
+##=====================================================================
+
 ###################################################
 # Location of the project directory and Makefiles
 #
 P := ../..
 M := $(P)/.makefile
-BUILD := $(P)/build
 
 ###################################################
 # Project definition
 #
 include $(P)/Makefile.common
-TARGET = TimedPetriNetGui
-DESCRIPTION = Library for the GUI of the Timed Petri Net Editor
-
-###################################################
-# Sharable informations between all Makefiles
-#
-include $(M)/Makefile.header
+TARGET_NAME :=  TimedPetriEditor
+TARGET_DESCRIPTION := Library Editor for Petri nets
+include $(M)/project/Makefile
 
 ###################################################
 # For the moment we only use Dear ImGui
 #
-include ./DearImGui/Makefile.imgui
+include ./DearImGui/Backends/Makefile
 
 ###################################################
 # Make the list of compiled files for the library
 #
-VPATH += $(P)/include $(P)/src $(P)/src/Utils $(P)/src/Net
-VPATH += $(P)/src/Net/Imports $(P)/src/Net/Exports
-INCLUDES += -I$(P)/include -I$(P)/src -I$(P)/external
-LIB_OBJS += $(GUI_OBJS) Drawable.o Application.o Editor.o
-
-###################################################
-# Compile the project, the static and shared libraries
-#
-.PHONY: all
-all: $(STATIC_LIB_TARGET) $(SHARED_LIB_TARGET) $(PKG_FILE) $(P)/Makefile $(P)/Makefile.common
-
-###################################################
-# Install project. You need to be root.
-.PHONY: install
-install: $(STATIC_LIB_TARGET) $(SHARED_LIB_TARGET) $(PKG_FILE)
-	@$(call INSTALL_PROJECT_LIBRARIES)
+INCLUDES += $(P)/src $(P)/include
+LIB_FILES += $(GUI_FILES)
 
 ###################################################
-# Sharable informations between all Makefiles
+# Generic Makefile rules
 #
-include $(M)/Makefile.footer
\ No newline at end of file
+include $(M)/rules/Makefile
\ No newline at end of file
diff --git a/src/Net/Exports/ExportCoDeSys.cpp b/src/Net/Exports/ExportCoDeSys.cpp__
similarity index 100%
rename from src/Net/Exports/ExportCoDeSys.cpp
rename to src/Net/Exports/ExportCoDeSys.cpp__
diff --git a/src/Net/Exports/ExportGrafcetLaTeX.cpp b/src/Net/Exports/ExportGrafcetLaTeX.cpp__
similarity index 100%
rename from src/Net/Exports/ExportGrafcetLaTeX.cpp
rename to src/Net/Exports/ExportGrafcetLaTeX.cpp__
diff --git a/src/Net/Makefile b/src/Net/Makefile
index 38cd3b9..6a652c0 100644
--- a/src/Net/Makefile
+++ b/src/Net/Makefile
@@ -1,90 +1,88 @@
+##=====================================================================
+## TimedPetriNetEditor: A timed Petri net editor.
+## Copyright 2021 -- 2023 Quentin Quadrat <lecrapouille@gmail.com>
+##
+## This file is part of PetriEditor.
+##
+## PetriEditor is free software: you can redistribute it and/or modify it
+## under the terms of the GNU General Public License as published by
+## the Free Software Foundation, either version 3 of the License, or
+## (at your option) any later version.
+##
+## This program is distributed in the hope that it will be useful, but
+## WITHOUT ANY WARRANTY; without even the implied warranty of
+## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+## General Public License for more details.
+##
+## You should have received a copy of the GNU General Public License
+## along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.
+##=====================================================================
+
 ###################################################
 # Location of the project directory and Makefiles
 #
 P := ../..
 M := $(P)/.makefile
-BUILD := $(P)/build
 
 ###################################################
 # Project definition
 #
 include $(P)/Makefile.common
-TARGET = TimedPetriNetCore
-DESCRIPTION = Library for the Core of the Timed Petri Net Editor
-
-###################################################
-# Location of the project directory and Makefiles
-#
-include $(M)/Makefile.header
+TARGET_NAME := TimedPetriNet
+TARGET_DESCRIPTION := Library manipulating Petri nets
+include $(M)/project/Makefile
 
 ###################################################
 # Set MQTT Library.
 #
-ifneq ($(ARCHI),Emscripten)
-INCLUDES += -I$(THIRDPART) -I$(THIRDPART)/MQTT/include
-VPATH += $(THIRDPART)/MQTT/src
-DEFINES += -DMQTT_BROKER_ADDR=\"localhost\"
-DEFINES += -DMQTT_BROKER_PORT=1883
-PKG_LIBS += libmosquitto
+ifeq ($(OS),Linux)
+    INCLUDES += $(THIRDPART_DIR)/MQTT/include
+    VPATH += $(THIRDPART_DIR)/MQTT/src
+    DEFINES += -DMQTT_BROKER_ADDR=\"localhost\"
+    DEFINES += -DMQTT_BROKER_PORT=1883
+    PKG_LIBS += libmosquitto
 endif
 
 ###################################################
 # Set json ibrary.
 #
-INCLUDES += -I$(THIRDPART)/json/include
+INCLUDES += $(THIRDPART_DIR)/json/include
 
 ###################################################
 # Set xml Library.
 #
-VPATH += $(THIRDPART)/tinyxml2
-LIB_OBJS += tinyxml2.o
+VPATH += $(THIRDPART_DIR)/tinyxml2
+LIB_FILES += $(THIRDPART_DIR)/tinyxml2/tinyxml2.cpp
+USER_CXXFLAGS := -Wno-old-style-cast -Wno-sign-conversion
 
 ###################################################
-# MacOS X
+# MacOS X: get path inside the bundle application
 #
-ifeq ($(ARCHI),Darwin)
-LINKER_FLAGS += -framework CoreFoundation
+ifeq ($(OS),Darwin)
+    LINKER_FLAGS += -framework CoreFoundation
 endif
 
 ###################################################
 # Inform Makefile where to find *.cpp files
 #
-VPATH += $(P)/include $(P)/src $(P)/src/Utils $(P)/src/Net
+VPATH += $(P)/src $(P)/src/Utils $(P)/src/Net
 VPATH += $(P)/src/Net/Imports $(P)/src/Net/Exports
 
 ###################################################
 # Inform Makefile where to find header files
 #
-INCLUDES += -I$(P)/include -I$(P)/src -I$(P)/external
-
-###################################################
-# Linkage
-#
-LINKER_FLAGS += -ldl -lpthread
+INCLUDES += $(P)/include $(P)/src $(THIRDPART_DIR)
 
 ###################################################
 # Make the list of compiled files for the library
 #
-LIB_OBJS += ImportJSON.o ImportPNML.o ImportTimedEventGraph.o ExportTimedEventGraph.o
-LIB_OBJS += ExportJSON.o ExportPNML.o ExportSymfony.o ExportPnEditor.o
-LIB_OBJS += ExportPetriLaTeX.o ExportJulia.o ExportGraphviz.o ExportDrawIO.o
-LIB_OBJS += ExportGrafcetCpp.o ImportFlowshop.o
-LIB_OBJS += Path.o Howard.o Utils.o TimedTokens.o Receptivities.o
-LIB_OBJS += PetriNet.o Algorithms.o Simulation.o History.o
-LIB_OBJS += Imports.o Exports.o
-
-###################################################
-# Compile the project, the static and shared libraries
-.PHONY: all
-all: $(STATIC_LIB_TARGET) $(SHARED_LIB_TARGET) $(PKG_FILE) $(P)/Makefile $(P)/Makefile.common
-
-###################################################
-# Install project. You need to be root.
-.PHONY: install
-install: $(STATIC_LIB_TARGET) $(SHARED_LIB_TARGET) $(PKG_FILE)
-	@$(call INSTALL_PROJECT_LIBRARIES)
+LIB_FILES += $(call rwildcard,$(P)/src/Net,*.cpp)
+LIB_FILES += $(call rwildcard,$(P)/src/Net,*.c)
+LIB_FILES += $(call rwildcard,$(P)/src/Utils,*.cpp)
+USER_CXXFLAGS += -Wno-cast-qual -Wno-float-equal
+USER_CCFLAGS += -Wno-sign-conversion -Wno-float-equal
 
 ###################################################
-# Sharable informations between all Makefiles
+# Generic Makefile rules
 #
-include $(M)/Makefile.footer
+include $(M)/rules/Makefile
\ No newline at end of file
diff --git a/src/Net/TODO_SparseMatrix.cpp b/src/Net/TODO_SparseMatrix.cpp__
similarity index 100%
rename from src/Net/TODO_SparseMatrix.cpp
rename to src/Net/TODO_SparseMatrix.cpp__
diff --git a/src/Utils/Path.hpp b/src/Utils/Path.hpp
index 979fb6c..05b7d47 100644
--- a/src/Utils/Path.hpp
+++ b/src/Utils/Path.hpp
@@ -33,15 +33,11 @@ std::string osx_get_resources_dir(std::string const& file);
 #  endif
 
 //------------------------------------------------------------------------------
-#  ifndef DATADIR
-#    define GET_DATA_PATH project::info::data_path
-#  endif
+#  undef GET_DATA_PATH
 #  if defined(__APPLE__)
-#    define GET_DATA_PATH   DATADIR":" + osx_get_resources_dir("")
-#  elif defined(__EMSCRIPTEN__)
-#    define GET_DATA_PATH   "data/"
+#    define GET_DATA_PATH osx_get_resources_dir("")
 #  else
-#    define GET_DATA_PATH   DATADIR
+#    define GET_DATA_PATH project::info::data_path
 #  endif
 
 // *****************************************************************************
diff --git a/src/julia/Makefile b/src/julia/Makefile
index 33fbc12..93afc5e 100644
--- a/src/julia/Makefile
+++ b/src/julia/Makefile
@@ -1,65 +1,78 @@
+##=====================================================================
+## TimedPetriNetEditor: A timed Petri net editor.
+## Copyright 2021 -- 2023 Quentin Quadrat <lecrapouille@gmail.com>
+##
+## This file is part of PetriEditor.
+##
+## PetriEditor is free software: you can redistribute it and/or modify it
+## under the terms of the GNU General Public License as published by
+## the Free Software Foundation, either version 3 of the License, or
+## (at your option) any later version.
+##
+## This program is distributed in the hope that it will be useful, but
+## WITHOUT ANY WARRANTY; without even the implied warranty of
+## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+## General Public License for more details.
+##
+## You should have received a copy of the GNU General Public License
+## along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.
+##=====================================================================
+
 ###################################################
 # Location of the project directory and Makefiles
 #
 P := ../..
 M := $(P)/.makefile
-BUILD := $(P)/build
 
 ###################################################
 # Project definition
 #
 include $(P)/Makefile.common
-TARGET = TimedPetriNetJulia
-DESCRIPTION = Timed Petri Net Editor interface for Julia
-
-###################################################
-# Location of the project directory and Makefiles
-#
-include $(M)/Makefile.header
-include $(P)/src/Editor/DearImGui/Makefile.imgui
+TARGET_NAME := TimedPetriJulia
+TARGET_DESCRIPTION := Timed Petri Net Editor interface for Julia
+include $(M)/project/Makefile
 
 ###################################################
 # Inform Makefile where to find *.cpp files
 #
-VPATH += $(P)/include $(P)/src $(P)/src/Utils $(P)/src/Net
+VPATH += $(P)/src $(P)/src/Utils $(P)/src/Net
 VPATH += $(P)/src/Net/Imports VPATH += $(P)/src/Net/Exports
 
 ###################################################
 # Inform Makefile where to find header files
 #
-INCLUDES += -I$(P)/include -I$(P)/src -I$(P)/external
+INCLUDES += $(P)/include $(P)/src $(P)/external
 
 ###################################################
 # Internal libraries since we can call the GUI from Julia REPL
-#
-LIB_TPNE_CORE = $(abspath $(P)/src/Net/$(BUILD)/libtimedpetrinetcore.a)
-LIB_TPNE_GUI = $(abspath $(P)/src/Editor/$(BUILD)/libtimedpetrinetgui.a)
-ifneq ($(EXAEQUOS),)
-PKG_LIBS += --static glfw
-else
-PKG_LIBS += --static glfw3
-LINKER_FLAGS += -lGL
-endif
-# WARNING: do not use += since we do not want to include twice libraylib.a
-THIRDPART_LIBS := $(LIB_TPNE_GUI) $(LIB_TPNE_CORE)
+# We force compilation order.
+LIB_TPNE_NET := TimedPetriNet
+LIB_TPNE_EDITOR := TimedPetriEditor
+INTERNAL_LIBS := $(LIB_TPNE_EDITOR) $(LIB_TPNE_NET)
+DIRS_WITH_MAKEFILE := $(P)/src/Net $(P)/src/Editor
+
+$(LIB_TPNE_NET): $(P)/src/Net
+
+$(LIB_TPNE_EDITOR): $(P)/src/Editor
+
+$(P)/src/Editor: $(P)/src/Net
 
 ###################################################
 # Make the list of compiled files for the library
 #
-LIB_OBJS += Julia.o
+LIB_FILES += $(P)/src/julia/Julia.cpp
 
-###################################################
-# Compile the project, the static and shared libraries
-.PHONY: all
-all: $(STATIC_LIB_TARGET) $(SHARED_LIB_TARGET) $(PKG_FILE) $(LIB_TPNE_GUI) $(LIB_TPNE_CORE) $(P)/Makefile $(P)/Makefile.common
+USER_CXXFLAGS := -Wno-cast-qual -Wno-undef
 
 ###################################################
-# Install project. You need to be root.
-.PHONY: install
-install: $(STATIC_LIB_TARGET) $(SHARED_LIB_TARGET) $(PKG_FILE)
-	@$(call INSTALL_PROJECT_LIBRARIES)
+# GUI
+#
+include $(abspath $(P)/src/Editor/DearImGui/Backends/Makefile)
+THIRDPART_LIBS :=
+INCLUDES += $(P)/src/Editor/DearImGui
+INCLUDES += $(P)/src
 
 ###################################################
-# Sharable informations between all Makefiles
+# Generic Makefile rules
 #
-include $(M)/Makefile.footer
+include $(M)/rules/Makefile
\ No newline at end of file
diff --git a/tests/Makefile b/tests/Makefile
index 26facf0..b9a7417 100644
--- a/tests/Makefile
+++ b/tests/Makefile
@@ -18,63 +18,53 @@
 ## along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.
 ##=====================================================================
 
-###################################################
-# Project definition
-#
-PROJECT = TimedPetriNetEditor
-TARGET = $(PROJECT)-UnitTest
-DESCRIPTION = Unit tests for $(PROJECT)
-BUILD_TYPE = debug
-USE_COVERAGE = 1
-
 ###################################################
 # Location of the project directory and Makefiles
 #
 P := ..
 M := $(P)/.makefile
-include $(M)/Makefile.header
 
 ###################################################
-# Inform Makefile where to find header files
+# Project definition
 #
-INCLUDES += -I$(P)/include -I$(P)/src -I$(P)/external
+include $(P)/Makefile.common
+TARGET_NAME := $(PROJECT_NAME)-UnitTest
+TARGET_DESCRIPTION := Unit tests for $(PROJECT_NAME)
+BUILD_TYPE = test
+include $(M)/project/Makefile
 
 ###################################################
-# Inform Makefile where to find *.cpp and *.o files
+# Set json ibrary.
 #
-VPATH += $(P)/include $(P)/src $(P)/src/Utils $(P)/src/Net
-VPATH += $(P)/src/Net/Imports VPATH += $(P)/src/Net/Exports
-VPATH += $(P)/src/Application $(P)/src/Editor $(P)/src/Editor/DearImGui
+INCLUDES += $(THIRDPART_DIR)/json/include
 
 ###################################################
-# Set json Library.
+# Set xml Library.
 #
-INCLUDES += -I$(THIRDPART)/json/include
+VPATH += $(THIRDPART_DIR)/tinyxml2
+SRC_FILES += $(THIRDPART_DIR)/tinyxml2/tinyxml2.cpp
+USER_CXXFLAGS := -Wno-old-style-cast -Wno-sign-conversion
 
 ###################################################
-# Set xml Library.
+# Inform Makefile where to find *.cpp files
 #
-VPATH += $(THIRDPART)/tinyxml2
-OBJS += tinyxml2.o
+VPATH += $(P)/src $(P)/src/Utils $(P)/src/Net
+VPATH += $(P)/src/Net/Imports $(P)/src/Net/Exports
 
 ###################################################
-# Make the list of compiled files for tests
+# Inform Makefile where to find header files
 #
-OBJS += Path.o Howard.o Utils.o TimedTokens.o Receptivities.o
-OBJS += PetriNet.o Algorithms.o Simulation.o
-OBJS += ExportGrafcetCpp.o ExportJSON.o ExportSymfony.o ExportPnEditor.o
-OBJS += ExportPetriLaTeX.o ExportJulia.o ExportGraphviz.o ExportDrawIO.o
-OBJS += ExportPNML.o Exports.o ImportPNML.o ImportJSON.o Imports.o
-OBJS += ImportTimedEventGraph.o ExportTimedEventGraph.o ImportFlowshop.o
-OBJS += PetriNetTests.o LoadJSONTests.o HowardTests.o EventGraphTests.o
-OBJS += SparseMatrixTests.o TimedTokensTests.o main.o
+INCLUDES += $(P)/include $(P)/src $(THIRDPART_DIR)
 
 ###################################################
-# MacOS X
+# Make the list of compiled files for the library
 #
-ifeq ($(ARCHI),Darwin)
-LINKER_FLAGS += -framework CoreFoundation
-endif
+SRC_FILES += $(call rwildcard,$(P)/src/Net,*.cpp)
+SRC_FILES += $(call rwildcard,$(P)/src/Net,*.c)
+SRC_FILES += $(call rwildcard,$(P)/src/Utils,*.cpp)
+SRC_FILES += $(call rwildcard,$(P)/tests,*.cpp)
+USER_CXXFLAGS += -Wno-float-equal
+USER_CCFLAGS += -Wno-sign-conversion -Wno-float-equal
 
 ###################################################
 # Set Libraries. For knowing which libraries
@@ -83,18 +73,6 @@ endif
 PKG_LIBS += gtest gmock
 
 ###################################################
-# Compile the project
-.PHONY: all
-all: $(TARGET)
-
-###################################################
-# Compile and launch unit tests and generate the code coverage html report.
-.PHONY: unit-tests
-.PHONY: check
-unit-tests check: $(TARGET)
-	@$(call print-to,"Running","$(TARGET)","$(RAPPORT)","")
-	$(SANITIZER) ./$(BUILD)/$(TARGET) $(TU_OPTIONS) || (cat $(TARGET).log; return 1)
-
-###################################################
-# Sharable informations between all Makefiles
-include $(M)/Makefile.footer
+# Generic Makefile rules
+#
+include $(M)/rules/Makefile
\ No newline at end of file