From 08c6b7e1bea6f1d7e26e02547bd761ea3ebe60bf Mon Sep 17 00:00:00 2001 From: Tobias Knopp Date: Fri, 5 Mar 2021 17:06:43 +0100 Subject: [PATCH 1/7] Update README.md --- README.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 09179d70..b3f82b33 100644 --- a/README.md +++ b/README.md @@ -17,7 +17,8 @@ ## How to give credit If you use this package please acknowledge us by citing: -T. Knopp and M. Grosser (2019). MRIReco.jl: An Extensible Open-Source Image Reconstruction Framework written in Julia. *Proc. ISMRM* 2019. +T. Knopp and M. Grosser (2021). MRIReco.jl: An MRI Reconstruction Framework written in Julia. [*arXiv:2101.12624*](https://arxiv.org/abs/2101.12624) + A BibTeX file is directly contained within this package `MRIReco.bib`. From 5cf1dfa0edaebc4da8873a074a642778d879be5f Mon Sep 17 00:00:00 2001 From: Tobias Knopp Date: Sat, 20 Mar 2021 16:54:06 +0100 Subject: [PATCH 2/7] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index b3f82b33..72e8110a 100644 --- a/README.md +++ b/README.md @@ -6,7 +6,7 @@ ![Lifecycle](https://img.shields.io/badge/lifecycle-retired-orange.svg) ![Lifecycle](https://img.shields.io/badge/lifecycle-archived-red.svg) ![Lifecycle](https://img.shields.io/badge/lifecycle-dormant-blue.svg) --> -[![Build status](https://github.com/tknopp/RegularizedLeastSquares.jl/workflows/CI/badge.svg)](https://github.com/tknopp/RegularizedLeastSquares.jl/actions) +[![Build status](https://github.com/MagneticResonanceImaging/MRIReco.jl/workflows/CI/badge.svg)](https://github.com/MagneticResonanceImaging/MRIReco.jl/actions) [![Build Status](https://travis-ci.org/MagneticResonanceImaging/MRIReco.jl.svg?branch=master)](https://travis-ci.com/MagneticResonanceImaging/MRIReco.jl) [![Build status](https://ci.appveyor.com/api/projects/status/cndx45nw2vuayo1j/branch/master?svg=true)](https://ci.appveyor.com/project/tknopp/mrireco-jl/branch/master) [![codecov.io](http://codecov.io/github/MagneticResonanceImaging/MRIReco.jl/coverage.svg?branch=master)](http://codecov.io/github/MagneticResonanceImaging/MRIReco.jl?branch=master) From 22d25bde143425fc490463dd39a4a8d4a646f769 Mon Sep 17 00:00:00 2001 From: Tobias Knopp Date: Sat, 20 Mar 2021 16:54:25 +0100 Subject: [PATCH 3/7] Update README.md --- README.md | 1 - 1 file changed, 1 deletion(-) diff --git a/README.md b/README.md index 72e8110a..a2b93452 100644 --- a/README.md +++ b/README.md @@ -7,7 +7,6 @@ ![Lifecycle](https://img.shields.io/badge/lifecycle-archived-red.svg) ![Lifecycle](https://img.shields.io/badge/lifecycle-dormant-blue.svg) --> [![Build status](https://github.com/MagneticResonanceImaging/MRIReco.jl/workflows/CI/badge.svg)](https://github.com/MagneticResonanceImaging/MRIReco.jl/actions) -[![Build Status](https://travis-ci.org/MagneticResonanceImaging/MRIReco.jl.svg?branch=master)](https://travis-ci.com/MagneticResonanceImaging/MRIReco.jl) [![Build status](https://ci.appveyor.com/api/projects/status/cndx45nw2vuayo1j/branch/master?svg=true)](https://ci.appveyor.com/project/tknopp/mrireco-jl/branch/master) [![codecov.io](http://codecov.io/github/MagneticResonanceImaging/MRIReco.jl/coverage.svg?branch=master)](http://codecov.io/github/MagneticResonanceImaging/MRIReco.jl?branch=master) From a767d12a790d3a10d24d863ff197f55bdf7c73a3 Mon Sep 17 00:00:00 2001 From: Tobias Knopp Date: Mon, 22 Mar 2021 15:45:28 +0100 Subject: [PATCH 4/7] Update MRIReco.jl --- src/MRIReco.jl | 2 ++ 1 file changed, 2 insertions(+) diff --git a/src/MRIReco.jl b/src/MRIReco.jl index 7c0e6b69..2c011aae 100644 --- a/src/MRIReco.jl +++ b/src/MRIReco.jl @@ -37,6 +37,8 @@ function __init__() if Threads.nthreads() > 1 BLAS.set_num_threads(1) FFTW.set_num_threads(1) + else if Sys.iswindows() + BLAS.set_num_threads(1) # see https://github.com/JuliaLang/julia/issues/36976 end end From 85e39e443719fb1f439fb3e9591905c1cf07caf8 Mon Sep 17 00:00:00 2001 From: Tobias Knopp Date: Mon, 22 Mar 2021 15:50:36 +0100 Subject: [PATCH 5/7] Update MRIReco.jl --- src/MRIReco.jl | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/MRIReco.jl b/src/MRIReco.jl index 2c011aae..05d888f2 100644 --- a/src/MRIReco.jl +++ b/src/MRIReco.jl @@ -37,7 +37,7 @@ function __init__() if Threads.nthreads() > 1 BLAS.set_num_threads(1) FFTW.set_num_threads(1) - else if Sys.iswindows() + elseif Sys.iswindows() BLAS.set_num_threads(1) # see https://github.com/JuliaLang/julia/issues/36976 end end From 2eab09d5a4c3b21795d7e4999d9cb5d9382d7d3e Mon Sep 17 00:00:00 2001 From: Tobias Knopp Date: Mon, 22 Mar 2021 18:17:56 +0100 Subject: [PATCH 6/7] Release --- Project.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Project.toml b/Project.toml index a5da857a..daad7fbb 100644 --- a/Project.toml +++ b/Project.toml @@ -1,7 +1,7 @@ name = "MRIReco" uuid = "bdf86e05-2d2b-5731-a332-f3fe1f9e047f" authors = ["Tobias Knopp "] -version = "0.3.1" +version = "0.3.2" [deps] Distributed = "8ba89e20-285c-5b6f-9357-94700520ee1b" From d791d39d6affe7054512998c5a3177cfad033e5e Mon Sep 17 00:00:00 2001 From: Tobias Knopp Date: Tue, 30 Mar 2021 16:30:33 +0200 Subject: [PATCH 7/7] Delete .travis.yml --- .travis.yml | 23 ----------------------- 1 file changed, 23 deletions(-) delete mode 100644 .travis.yml diff --git a/.travis.yml b/.travis.yml deleted file mode 100644 index 0565dcde..00000000 --- a/.travis.yml +++ /dev/null @@ -1,23 +0,0 @@ -## Documentation: http://docs.travis-ci.com/user/languages/julia/ -language: julia -os: - - linux -# - osx -julia: - - 1.5 - - nightly -notifications: - email: false -git: - depth: 99999999 - -## uncomment the following lines to allow failures on nightly julia -## (tests will run but not make your overall status red) -matrix: - allow_failures: - - julia: nightly - -# uncomment the following lines to override the default test script -script: - - if [[ -a .git/shallow ]]; then git fetch --unshallow; fi - - travis_wait 50 julia --project -e 'using Pkg; Pkg.build(); Pkg.test(; coverage=true)';