Could you please tell me how to "inversion.txt" in the 1_QC_GWAS folder

[8865225]

I want to practice my genetic data following your tutorial, but I do not know how to create the mydata-based inversion.txt file. Could you please tell me in detail. Thank you very much.

[MareesAT]

This file is not specific to the tutorial data. In essence, it's a simple text file indicating certain regions for exclusion (e.g., the HLA region; high LD regions), based on the literature.

So, feel free to use this file, or update it based on the literature, since our file might be outdated by now.

[shafiqnoa]

I am trying to make sense of this recently. Are regions provided in the tutorial based on the hg19 build?