The PO.DAAC Data subscriber is a python-based tool for continuously downloading data from the PO.DAAC archive. Use this script if you want to constantly download the newest data from PO.DAAC as it comes in.
For installation and dependency information, please see the top-level README.
$> podaac-data-subscriber -h
-h, --help show this help message and exit
-c COLLECTION, --collection-shortname COLLECTION
The collection shortname for which you want to retrieve data.
-d OUTPUTDIRECTORY, --data-dir OUTPUTDIRECTORY
The directory where data products will be downloaded.
-f, --force Flag to force downloading files that are listed in CMR query, even if the file exists and checksum matches
-sd STARTDATE, --start-date STARTDATE
The ISO date time after which data should be retrieved. For Example, --start-date 2021-01-14T00:00:00Z
-ed ENDDATE, --end-date ENDDATE
The ISO date time before which data should be retrieved. For Example, --end-date 2021-01-14T00:00:00Z
-b BBOX, --bounds BBOX
The bounding rectangle to filter result in. Format is W Longitude,S Latitude,E Longitude,N Latitude without spaces. Due to an issue with parsing arguments, to use this command, please use the -b="-180,-90,180,90" syntax when calling from the command line.
Default: "-180,-90,180,90".
-dc Flag to use cycle number for directory where data products will be downloaded.
-dydoy Flag to use start time (Year/DOY) of downloaded data for directory where data products will be downloaded.
-dymd Flag to use start time (Year/Month/Day) of downloaded data for directory where data products will be downloaded.
-dy Flag to use start time (Year) of downloaded data for directory where data products will be downloaded.
--offset OFFSET Flag used to shift timestamp. Units are in hours, e.g. 10 or -10.
-m MINUTES, --minutes MINUTES
How far back in time, in minutes, should the script look for data. If running this script as a cron, this value should be equal to or greater than how often your cron runs.
-e EXTENSIONS, --extensions EXTENSIONS
Regexps of extensions of products to download. Default is [.nc, .h5, .zip, .tar.gz, .tiff]
--process PROCESS_CMD
Processing command to run on each downloaded file (e.g., compression). Can be specified multiple times.
--version Display script version information and exit.
--verbose Verbose mode.
-p PROVIDER, --provider PROVIDER
Specify a provider for collection search. Default is POCLOUD.
--dry-run Search and identify files to download, but do not actually download them
Usage:
usage: PO.DAAC data subscriber [-h] -c COLLECTION -d OUTPUTDIRECTORY [-f] [-sd STARTDATE] [-ed ENDDATE] [-b BBOX] [-dc] [-dydoy] [-dymd] [-dy] [--offset OFFSET] [-m MINUTES] [-e EXTENSIONS] [--process PROCESS_CMD] [--version] [--verbose] [-p PROVIDER] [--dry-run]
To run the script, the following parameters are required:
-c COLLECTION, --collection-shortname COLLECTION
The collection shortname for which you want to retrieve data.
-d OUTPUTDIRECTORY, --data-dir OUTPUTDIRECTORY
The directory where data products will be downloaded.
And one of
-sd STARTDATE, --start-date STARTDATE
The ISO date time before which data should be retrieved. For Example, --start-date 2021-01-14T00:00:00Z
-ed ENDDATE, --end-date ENDDATE
The ISO date time after which data should be retrieved. For Example, --end-date 2021-01-14T00:00:00Z
-m MINUTES, --minutes MINUTES
How far back in time, in minutes, should the script look for data. If running this script as a cron, this value should be equal to or greater than how often your cron runs.
COLLECTION is collection shortname of interest. This can be found from the PO.DAAC Portal, CMR, or earthdata search. Please see the included Finding_shortname.pdf document on how to find a collection shortname.
OUTPUTDIRECTORY is the directory in which files will be downloaded. It's customary to set this to a data directory and include the collection shortname as part of the path so if you run multiple subscribers, the data are not dumped into the same directory.
One last required item is a time entry, one of --start-date, --end-date, or --minutes must be specified. This is done so that a time is explicitly requested, and fewer assumptions are made about how the users is running the subscriber.
The Script will login to CMR and the PO.DAAC Archive using a netrc file. See Note 1 for more information on setting this up.
Every time the script runs successfully (that is, no errors), a .update__<collectionname> file is created in your download directory with the last run timestamp. This timestamp will be used the next time the script is run. It will look for data between the timestamp in that file and the current time to determine new files to download.
There are numerous 'times' available to query on in CMR. For the default subscriber, we look at the 'created at' field, which will look for when a granule file was ingested into the archive. This means as PO.DAAC gets data, your subscriber will also get data, regardless of the time range within the granule itself.
The netrc used within the script will allow Python scripts to log into any Earthdata Login without being prompted for credentials every time you run. The netrc file should be placed in your HOME directory. To find the location of your HOME directory
On UNIX you can use
echo $HOME
On Windows you can use
echo %HOMEDRIVE%%HOMEPATH%
The output location from the command above should be the location of the .netrc (_netrc on Windows) file.
The format of the netrc file is as follows:
machine urs.earthdata.nasa.gov
login <your username>
password <your password>
for example:
machine urs.earthdata.nasa.gov
login podaacUser
password podaacIsAwesome
If the script cannot find the netrc file, you will be prompted to enter the username and password and the script wont be able to generate the CMR token
Use the 'provider' flag to point at a non-PO.DAAC provider. Be aware, the default data types (--extensions) may need to be specified if the desired data are not in the defaults.
podaac-data-subscriber -c SENTINEL-1A_SLC -d myData -p ASF -sd 2014-06-01T00:46:02Z
For error troubleshooting, one can set an environment variable to gain more insight into errors:
export PODAAC_LOGLEVEL=DEBUG
And then run the script. This should give you more verbose output on URL requests to CMR, tokens, etc.
The subscriber allows the placement of downloaded files into one of several directory structures based on the flags used to run the subscriber.
- -d - required, specifies the directory to which data is downloaded. If this is the only flag specified, all files will be downloaded to this single directory.
- -dc - optional, if 'cycle' information exists in the product metadata, download it to the data directory and use a relative c path to store granules. The relative path is 0 padded to 4 total digits (e.g. c0001)
- -dydoy - optional, relative paths use the start time of a granule to layout data in a YEAR/DAY-OF-YEAR path
- -dymd - optional, relative paths use the start time of a granule to layout data in a YEAR/MONTH/DAY path
By default, when the subscriber is about to download a file, it first:
- Checks if the file already exists in the target location
- Creates a checksum for the file and sees if it matches the checksum for that file in CMR
If the file already exists AND the checksum matches, the subscriber will skip downloading that file.
This can drastically reduce the time for the subscriber to complete. Also, since the checksum is verified, files will still be re-downloaded if for some reason the file has changed (or the file already on disk is corrupted).
You can override this default behavior - forcing the subscriber to always download matching files, by using --force/-f.
podaac-data-subscriber -c SENTINEL-1A_SLC -d myData -f
To automatically run and update a local file system with data files from a collection, one can use a syntax like the following:
10 * * * * podaac-data-subscriber -c VIIRS_N20-OSPO-L2P-v2.61 -d /path/to/data/VIIRS_N20-OSPO-L2P-v2.61 -e .nc -e .h5 -m 60 -b="-180,-90,180,90" --verbose >> ~/.subscriber.log
This will run every hour at ten minutes passed, and output will be appended to a local file called ~/.subscriber.log
If you're interested in a specific region, you can set the bounds parameter on your request to filter data that passes through a certain area. This is useful in particular for non-global datasets (such as swath datasets) with non-global coverage per file.
Note: This does not subset the data, it just uses file metadata to see if any part of the datafile passes through your region. This will download the entire file, including data outside of the region specified.
-b BBOX, --bounds BBOX
The bounding rectangle to filter result in. Format is W Longitude,S Latitude,E Longitude,N Latitude without spaces. Due to an issue with parsing arguments, to use this command, please use the -b="-180,-90,180,90" syntax when calling from
the command line. Default: "-180,-90,180,90\.
An example of the -b usage:
podaac-data-subscriber -c VIIRS_N20-OSPO-L2P-v2.61 -d ./data -b="-180,-90,180,90"
Some collections have many files. To download a specific set of files, you can set the extensions on which downloads are filtered. By default, ".nc", ".h5", and ".zip" files are downloaded by default. The -e option is a regular expression check so you can do advanced things like -e PTM_\\d+ to match PTM_ followed by one or more digits- useful when the ending of a file has no suffix and has a number (1-12 for PTM, in this example)
-e EXTENSIONS, --extensions EXTENSIONS
Regexps of extensions of products to download. Default is [.nc, .h5, .zip, .tar.gz, .tiff]
An example of the -e usage- note the -e option is additive:
podaac-data-subscriber -c VIIRS_N20-OSPO-L2P-v2.61 -d ./data -e .nc -e .h5
One may also specify a regular expression to select files. For example, the following are equivalent:
podaac-data-subscriber -c VIIRS_N20-OSPO-L2P-v2.61 -d ./data -e PTM_1, -e PTM_2, ..., -e PMT_10 -sd 2020-06-01T00:46:02Z -ed 2020-07-01T00:46:02Z
and
podaac-data-subscriber -c VIIRS_N20-OSPO-L2P-v2.61 -d ./data -e PTM_\\d+ -sd 2020-06-01T00:46:02Z -ed 2020-07-01T00:46:02Z
Using the --process option, you can run a simple command agaisnt the "just" downloaded file. This will take the format of " <path/to/file>". This means you can run a command like --process gzip to gzip all downloaded files. We do not support more advanced processes at this time (piping, running a process on a directory, etc).
The PO.DAAC User Services Office is the primary point of contact for answering your questions concerning data and information held by the PO.DAAC. User Services staff members are knowledgeable about both the data ordering system and the data products themselves. We answer questions about data, route requests to other DAACs, and direct questions we cannot answer to the appropriate information source.
Please contact us via email at podaac@podaac.jpl.nasa.gov