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TorecLuik committed May 22, 2024
1 parent c8241d6 commit a98c6a4
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Showing 9 changed files with 9 additions and 10 deletions.
2 changes: 1 addition & 1 deletion Example_Minimal_Slurm_Script.py
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Expand Up @@ -41,7 +41,7 @@ def runScript():

params = JobParams()
params.authors = ["Torec Luik"]
params.version = "1.9.0"
params.version = "1.10.0"
params.description = f'''Example script to run on slurm cluster
Runs a script remotely on SLURM.
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2 changes: 1 addition & 1 deletion data/SLURM_Get_Results.py
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Expand Up @@ -727,7 +727,7 @@ def runScript():


namespaces=[omero.constants.namespaces.NSDYNAMIC],
version="1.9.0",
version="1.10.0",
authors=["Torec Luik"],
institutions=["Amsterdam UMC"],
contact='cellularimaging@amsterdamumc.nl',
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2 changes: 1 addition & 1 deletion data/SLURM_Get_Update.py
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Expand Up @@ -76,7 +76,7 @@ def runScript():
description="Project to attach workflow results to",
values=_projects),
namespaces=[omero.constants.namespaces.NSDYNAMIC],
version="1.9.0",
version="1.10.0",
authors=["Torec Luik"],
institutions=["Amsterdam UMC"],
contact='cellularimaging@amsterdamumc.nl',
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3 changes: 1 addition & 2 deletions data/_SLURM_Image_Transfer.py
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Expand Up @@ -25,7 +25,6 @@
zip file for download, then exports it to SLURM.
@author Torec Luik
@version 1.5.0
"""

import shutil
Expand Down Expand Up @@ -705,7 +704,7 @@ def run_script():
description="Name of folder (and zip file) to store images. Don't use spaces!",
default=constants.transfer.FOLDER_DEFAULT+str(int(datetime.now().timestamp()))),

version="1.9.0",
version="1.10.0",
authors=["Torec Luik", "William Moore", "OME Team"],
institutions=["Amsterdam UMC", "University of Dundee"],
contact='cellularimaging@amsterdamumc.nl',
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2 changes: 1 addition & 1 deletion init/SLURM_Init_environment.py
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Expand Up @@ -41,7 +41,7 @@ def runScript():
scripts.String(extra_config_name, optional=True, grouping="01.1",
description="The path to your configuration file on the server. Optional."),
namespaces=[omero.constants.namespaces.NSDYNAMIC],
version="1.9.0",
version="1.10.0",
authors=["Torec Luik"],
institutions=["Amsterdam UMC"],
contact='cellularimaging@amsterdamumc.nl',
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2 changes: 1 addition & 1 deletion init/SLURM_check_setup.py
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Expand Up @@ -31,7 +31,7 @@ def runScript():
'''Check Slurm setup, e.g. available workflows.
''',
namespaces=[omero.constants.namespaces.NSDYNAMIC],
version="1.9.0",
version="1.10.0",
authors=["Torec Luik"],
institutions=["Amsterdam UMC"],
contact='cellularimaging@amsterdamumc.nl',
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2 changes: 1 addition & 1 deletion workflows/SLURM_CellPose_Segmentation.py
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Expand Up @@ -39,7 +39,7 @@ def runScript():

params = JobParams()
params.authors = ["Torec Luik"]
params.version = "1.9.0"
params.version = "1.10.0"
params.description = f'''Script to run CellPose on slurm cluster.
First run the {constants.IMAGE_EXPORT_SCRIPT} script to export your data
to the cluster.
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2 changes: 1 addition & 1 deletion workflows/SLURM_Run_Workflow.py
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Expand Up @@ -56,7 +56,7 @@ def runScript():
# and populated with the currently selected Image(s)/Dataset(s)
params = JobParams()
params.authors = ["Torec Luik"]
params.version = "1.9.0"
params.version = "1.10.0"
params.description = f'''Script to run a workflow on the Slurm cluster.
This runs a script remotely on your Slurm cluster.
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2 changes: 1 addition & 1 deletion workflows/SLURM_Run_Workflow_Batched.py
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Expand Up @@ -58,7 +58,7 @@ def runScript():
# and populated with the currently selected Image(s)/Dataset(s)
params = JobParams()
params.authors = ["Torec Luik"]
params.version = "1.9.0"
params.version = "1.10.0"
params.description = f'''Script to run workflows on slurm
cluster, in batches.
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