Skip to content

Latest commit

 

History

History
90 lines (86 loc) · 25.3 KB

OB-shared-list-video-recordings.md

File metadata and controls

90 lines (86 loc) · 25.3 KB

VideoRecordings

A curated list of video recordings from neuroscience experiments from the OpenBehavior project.

  • Video recordings from neuroscience experiments are provided for 78 projects that have been featured on the OpenBehavior website.
  • This is our initial effort at curating a list of video recordings. If you would like to add a collection to the list, please send email to the OB team using this link.
  • The list was put together by Abby St Jean, an undergraduate neuroscience major at American University.
Project Link Notes
3DOC https://www.eneuro.org/content/7/2/ENEURO.0502-19.2020/tab-figures-data#fig-data-movies Movies in Figures
3DTracker https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3813688/bin/pone.0078460.s009.mp4 Direct download link
4 Port Nose Poke https://ars.els-cdn.com/content/image/1-s2.0-S2215016116300073-mmc5.mp4 Direct download link
A Head-Mounted Multi-Camera System for Freely-Moving Mice https://www.frontiersin.org/journals/neuroscience/articles/10.3389/fnins.2020.592417/full#supplementary-material Videos in Supplementary Info
ACRoBaT https://www.sciencedirect.com/science/article/pii/S0166432817314663?via%3Dihub#upi0020 Videos in Supplementary Info
Actifield https://www.sciencedirect.com/science/article/pii/S2468067218300695#s0145 Videos in Supplementary Info
Airtrack https://journals.physiology.org/doi/suppl/10.1152/jn.00088.2016 Videos in Supplementary Info
AnimalTA https://github.com/VioletteChiara/AnimalTA/tree/master/Tracked_videos Folder
Anipose https://ars.els-cdn.com/content/image/1-s2.0-S2211124721011797-mmc2.mp4 Direct download link
Automatic Home-Cage Functional Imaging https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909937/#S1title Videos in Supplementary Info
Autonomous Training of a Forelimb Motor Task https://journals.physiology.org/doi/suppl/10.1152/jn.00115.2017/suppl_file/home%20cage%20lever%20positioning%20task.mov Direct download link
B-SOiD https://github.com/YttriLab/B-SOID/blob/master/demo/ClusteredBehavior_aligned.mp4 Direct download link
BehaviorDEPOT https://drive.google.com/drive/folders/1VNv9FuXyiI4xgt-RokcVvWk-1dBovuqO Folder
BENTO https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8631946/bin/elife-63720-video2.mp4 Direct download link
BonVision https://www.biorxiv.org/content/biorxiv/early/2020/07/04/2020.03.09.983775/DC1/embed/media-1.mp4?download=true Direct download link
Bonzeb https://github.com/ncguilbeault/BonZeb/tree/master/Videos Folder
BORIS https://besjournals.onlinelibrary.wiley.com/action/downloadSupplement?doi=10.1111%2F2041-210X.12584&file=mee312584-sup-0003-VideoS3.mp4 Direct download link
CaImAn https://elifesciences.org/articles/38173/figures#videos Movies in Figures
Capacative Touch Sensor https://ars.els-cdn.com/content/image/1-s2.0-S2215016120302442-mmc1.mp4 Direct download link
CaT-z https://zenodo.org/records/3636136 Folder
CAVE https://github.com/mtlippert/CAVE/blob/master/CAVE/TestData/TestDataVideo.MP4 Direct download link
D-Track https://www.youtube.com/watch?v=4KGe94g8F3g Direct download link
DAANCE https://github.com/spoonsso/dannce/blob/master/demo/markerless_mouse_1/videos/link_to_videos.txt Direct download link
DBscorer https://github.com/swanandlab/DBscorer/tree/main Folder
DeepBehavior https://www.frontiersin.org/articles/10.3389/fnsys.2019.00020/full#supplementary-material Videos in Supplementary Info
DeepBhvTracking https://github.com/SunGL001/DeepBhvTracking/blob/main/demo_video.mp4 Direct download link
DeepEthogram https://www.dropbox.com/sh/3lilfob0sz21och/AABv8o8KhhRQhYCMNu0ilR8wa?e=1&dl=0 Folder
DeepFly3D https://github.com/NeLy-EPFL/DeepFly3D/tree/master/sample/test/df3d Folder
DeepLabCut https://github.com/DeepLabCut/DeepLabCut/tree/main/examples Folder
DeepPoseKit https://elifesciences.org/articles/47994/figures#fig1video1 Movies in Figures
DIY Rodent Running Disk https://www.sciencedirect.com/science/article/pii/S0896627317311686?via%3Dihub#app2 Videos in Supplementary Info
DLStream https://static-content.springer.com/esm/art%3A10.1038%2Fs42003-021-01654-9/MediaObjects/42003_2021_1654_MOESM4_ESM.mp4 Videos in Supplementary Info
Eco-HAB https://elifesciences.org/articles/19532/figures#videos Movies in Figures
Ethoscopes https://journals.plos.org/plosbiology/article/file?type=supplementary&id=10.1371/journal.pbio.2003026.s007 Videos in Supplementary Info
ezTrack https://github.com/denisecailab/ezTrack/tree/master/PracticeVideos Folder
FaceMap https://www.science.org/doi/10.1126/science.aav7893?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed#core-collateral-media Movies in Figures
FaceSync https://osf.io/b2nua/ Folder
FED https://ars.els-cdn.com/content/image/1-s2.0-S0165027016300413-mmc1.mp4 Direct download link
FinchScope https://iopscience.iop.org/article/10.1088/1741-2552/aa6806/meta;jsessionid=DC666A8D2003BCEA6B31503C6026FF48.c3.iopscience.cld.iop.org#back-to-top-target:~:text=Hide-,supplementary%20data,-Video%201.%20(4.5%20MB%20mov Videos in Supplementary Info
flyPAD https://static-content.springer.com/esm/art%3A10.1038%2Fncomms5560/MediaObjects/41467_2014_BFncomms5560_MOESM366_ESM.mov Direct download link
FreemoVR https://www.nature.com/articles/nmeth.4399#Sec23 Videos in Supplementary Info
GoFish https://www.biorxiv.org/content/10.1101/2022.04.04.486957v1.supplementary-material Videos in Supplementary Info
HASRA https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7581188/bin/enu-eN-MNT-0242-20-s01.mp4 Direct download link
Homecage Task Training and Mesoscale Imaging https://elifesciences.org/articles/55964/figures#fig8video1 Movies in Figures
idtracker.ai https://drive.google.com/drive/folders/1oGpHsu2EfWqU-mSMhO3iAtEKCpcoPIT4 Folder
JARVIS https://jarvis-mocap.github.io/jarvis-docs/model_database/model_database/ Webpage
KineMouse Wheel https://elifesciences.org/articles/63596/figures#videos Movies in Figures
Lightning Pose https://github.com/danbider/lightning-pose/tree/main/data/mirror-mouse-example/videos Direct download link
Locomouse https://elifesciences.org/articles/07892/figures#videos Movies in Figures
M-Track https://github.com/scimemia/M-Track/tree/master/Sample-videos-and-ouput-files Folder
M3 Platform https://youtu.be/xUf7HHiazEI Direct download link
MAPLE https://elifesciences.org/articles/37166/figures#videos Movies in Figures
MARS https://elifesciences.org/articles/63720/figures#videos Movies in Figures
Modular LED Displays https://www.biorxiv.org/content/10.1101/2022.08.02.502550v1.supplementary-material Videos in Supplementary Info
MouBeAt https://github.com/helioalexandre/MouBeAT/blob/master/Video%20S1%20(Open%20Field%20test).zip Folder
MouseMove https://static-content.springer.com/esm/art%3A10.1038%2Fsrep16171/MediaObjects/41598_2015_BFsrep16171_MOESM6_ESM.avi Direct download link
OBAT https://static-content.springer.com/esm/art%3A10.3758%2Fs13428-017-0906-6/MediaObjects/13428_2017_906_MOESM2_ESM.wmv Direct download link
Open Source Joystick https://www.eneuro.org/content/7/2/ENEURO.0523-19.2020/tab-figures-data#fig-data-movies Movies in Figures
Open Source Whisking Video Database http://gigadb.org/dataset/100512 Movies in Figures
OpenMV https://openmv.io/pages/applications Webpage
OpenPose https://www.biorxiv.org/content/biorxiv/early/2021/01/30/2021.01.28.428726/DC1/embed/media-1.avi?download=true Direct download link
OpenVape https://www.eneuro.org/content/7/5/ENEURO.0279-20.2020/tab-figures-data#fig-data-movies Movies in Figures
OptiMouse https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-017-0377-3#Sec14 Movies in Figures
PASTA https://www.nature.com/articles/s41598-021-82710-6#Sec28 Videos in Supplementary Info
PAWS https://elifesciences.org/articles/57258/figures#fig2video1 Movies in Figures
Pi USB Cam https://www.eneuro.org/content/9/5/ENEURO.0224-22.2022/tab-figures-data Movies in Figures
PiRATeMC https://ars.els-cdn.com/content/image/1-s2.0-S2772392523000512-mmc6.mp4 Direct download link
PiVR https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3000712#sec025 Movies in Figures
PyMouseTracks https://www.eneuro.org/content/10/5/ENEURO.0127-22.2023/tab-figures-data Movies in Figures
pyOS-5 https://www.nature.com/articles/s41598-021-01717-1#MOESM2 Videos in Supplementary Info
Quantifying Animal Movement from Pre-recorded Videos https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4038320/bin/f1000research-3-3552-s0000.tgz Direct download link
Rodent Arena Tracker https://www.eneuro.org/content/7/3/ENEURO.0485-19.2020/tab-figures-data#fig-data-movies Movies in Figures
SEB3R https://www.eneuro.org/content/10/9/ENEURO.0514-22.2023/tab-figures-data#fig-data-movies Movies in Figures
SIPEC https://www.biorxiv.org/content/10.1101/2020.10.26.355115v4.supplementary-material Videos in Supplementary Info
SLEAP https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9007740/# Videos in Supplementary Info
The Home-Cage Automated Skilled Reaching Apparatus (HASRA) https://www.eneuro.org/content/7/5/ENEURO.0242-20.2020/tab-figures-data#fig-data-movies Movies in Figures
USVCAM https://www.cell.com/iscience/fulltext/S2589-0042(22)01084-7?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS2589004222010847%3Fshowall%3Dtrue#secsectitle0040 Movies in Figures
VAME https://www.nature.com/articles/s42003-022-04080-7#Sec26 Videos in Supplementary Info

This Markdown table was created from a CSV file using the csv2md python-based command line tool for converting CSV files into Markdown tables. https://github.com/lzakharov/csv2md