Skip to content

Latest commit

 

History

History
65 lines (42 loc) · 2.34 KB

CHANGELOG.md

File metadata and controls

65 lines (42 loc) · 2.34 KB
Raw

Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

[Unreleased]

[2.5.0] - 2024-08-20

  • Updated Molstar version to 4.5.0

[2.4.0] - 2024-01-10

  • Fixed zoom issues (too much zoom when using PDBImages <2.4 with MolStar >=3.43.0)

[2.3.2] - 2024-01-02

  • Added citing information to README

[2.3.1] - 2023-10-20

  • Fixed typing for older TypeScript versions
  • Updated GitHub actions to use docker/login-action@v3, docker/build-push-action@v5

[2.3.0] - 2023-10-20

  • Added pdb2cif utility script

[2.2.0] - 2023-08-08

  • Show ball-and-stick visual for amino acids linking carbohydrate to protein
  • Added createArgs function for calling main more easily

[2.1.1] - 2023-07-26

  • Fixed bug in checking expected files (do not check if empty when missing)
  • Do not fail when PDBe Structure Validation Report is not available, show gray structure instead (e.g. 6u6h)
  • Do not fail when modified residue is not modelled, show structure without anything highlighted instead (e.g. 1aco)
  • Do not fail when ligand is not modelled, show structure without anything highlighted instead (e.g. 2icy)
  • Print warning when assemblies from API don't reflect mmCIF and use the first assembly as fallback for preferred assembly (e.g. 2zuf)

[2.1.0] - 2023-07-20

  • Image sizes are automatically sorted from the largest to the smallest (so that the largest one is rendered)
  • Fixed assembly captions, fixed homo/hetero n-mer names in captions (e.g. 8a5v)
  • Ensembles - zoom on all models
  • Fixed colors so that color of mono-element entity (e.g. Na, Mg) equals color of the element
  • Fixed coloring by chain for ball-and-stick visuals
  • Sister colors (used for chains of the same entity) - first use lighter
  • Added ball-and-stick visual for non-standard residues
  • Opacity in entity images is dependent on structure size
  • Save _api_data.json
  • Create _expected_files.txt and check for missing files after run
  • Hide hydrogens and branched entity balls-and-sticks by default
  • New args --show-hydrogens --show-branched-sticks --ensemble-shades --allow-lowest-quality

[2.0.0] - 2023-07-19

  • Renamed this package to pdb-images

[1.0.0] - 2023-06-20

  • First official release