diff --git a/README.md b/README.md index de19f21..05371ab 100644 --- a/README.md +++ b/README.md @@ -21,7 +21,7 @@ Please refer to our [official pbbioconda page](https://github.com/PacificBioscie for information on Installation, Support, License, Copyright, and Disclaimer. ## Latest Version -Version **1.12.0**: [Full changelog here](#full-changelog) +Version **1.13.0**: [Full changelog here](#full-changelog) ## Usage _pbmm2_ offers following tools @@ -142,7 +142,9 @@ pbmm2 align hg38.fasta mymovies.fofn hg38.mymovies.bam ## FAQ ### Which minimap2 version is used? -Minimap2 version 2.15 is used, to be specific, SHA1 [c404f49](https://github.com/lh3/minimap2/commit/c404f49569fa2d606b652418ffa4b9743bcaf641). + + - pbmm2 ≥v1.13.0: minimap2 v2.26 + - pbmm2 ≥v1.13.0: minimap2 v2.15 ### When are `pbi` files created? Whenever the output is of type `xml`, a `pbi` file is being generated. @@ -420,7 +422,10 @@ and in the same orientation, which are the only fields that `samtools sort` uses ## Full Changelog - * **1.12.0**: + * 1.13.0: + * Update minimap2 to version 2.26 + + * 1.12.0: * Set `--preset CCS` as default * Change repeated matches trimming to adhere to minimap2 alignment ordering diff --git a/meson.build b/meson.build index 6070362..ecad42a 100644 --- a/meson.build +++ b/meson.build @@ -1,7 +1,7 @@ project( 'pbmm2', ['c', 'cpp'], - version : '1.12.99', + version : '1.13.0', default_options : [ 'buildtype=release', 'warning_level=3',