From 8e71bc41c070a5b6b48bae87168fe517eee054b2 Mon Sep 17 00:00:00 2001
From: Guillaume Poirier-Morency <poirigui@msl.ubc.ca>
Date: Tue, 3 Sep 2024 15:30:34 -0700
Subject: [PATCH] Pass --rerun to GenerateReportForExperiment in
 SubmitExperimentReportToGemma

---
 rnaseq_pipeline/tasks.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/rnaseq_pipeline/tasks.py b/rnaseq_pipeline/tasks.py
index 3bff9d0..19436b8 100755
--- a/rnaseq_pipeline/tasks.py
+++ b/rnaseq_pipeline/tasks.py
@@ -453,7 +453,8 @@ def requires(self):
         return GenerateReportForExperiment(self.experiment_id,
                                            taxon=self.taxon,
                                            reference_id=self.reference_id,
-                                           source='gemma')
+                                           source='gemma',
+                                           rerun=self.rerun)
 
     def run(self):
         self.output().makedirs()