DESCRIPTION

Package: UCSCXenaShiny
Title: Interactive Analysis of UCSC Xena Data
Version: 1.1.12
Authors@R: 
    c(person(given = "Shixiang",
             family = "Wang",
             role = c("aut", "cre"),
             email = "w_shixiang@163.com",
             comment = c(ORCID = "0000-0001-9855-7357")),
      person(given = "Yi",
             family = "Xiong",
             role = "aut",
             email = "neuroxiong@openbiox.com",
             comment = c(ORCID = "0000-0002-4370-9824")),
      person(given = "Longfei",
             family = "Zhao",
             role = "aut",
             email = "longfei8533@126.com",
             comment = c(ORCID = "0000-0002-6277-0137")),
      person(given = "Kai",
             family = "Gu",
             role = "aut",
             email = "gukai1212@163.com",
             comment = c(ORCID = "0000-0002-0177-0774")),
      person(given = "Yin",
             family = "Li",
             role = "aut",
             email = "yinli18@fudan.edu.cn"),
      person(given = "Fei",
             family = "Zhao",
             role = "aut",
             email = "zhaofei415@mails.ucas.edu.cn"))
Maintainer: Shixiang Wang <w_shixiang@163.com>
Description: Provides functions and a Shiny application for downloading,
    analyzing and visualizing datasets from UCSC Xena
    (<http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public
    databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.
License: GPL (>= 3)
URL: https://github.com/openbiox/UCSCXenaShiny
BugReports: https://github.com/openbiox/UCSCXenaShiny/issues
Depends: 
    R (>= 3.5)
Imports: 
    dplyr (>= 0.8.3),
    ezcox,
    forcats,
    ggplot2 (>= 3.2.0),
    ggpubr (>= 0.2),
    magrittr (>= 1.5),
    ppcor,
    psych,
    purrr,
    Rtsne,
    shiny (>= 1.3.2),
    stats,
    stringr,
    tibble (>= 2.1.3),
    tidyr,
    UCSCXenaTools,
    umap,
    utils
Suggests: 
    covr (>= 3.2.1),
    cowplot,
    DT (>= 0.5),
    furrr,
    future,
    ggrepel,
    ggstatsplot,
    knitr,
    pacman,
    plotly,
    plyr,
    RColorBrewer (>= 1.1.2),
    rmarkdown,
    scales,
    survival,
    survminer,
    testthat (>= 2.0.1)
VignetteBuilder: 
    knitr
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3