pyproject.toml

[build-system]
# Defined by PEP 518:
requires = [
    # for building Cython extensions
    "cython", "numpy", "setuptools", "wheel",
    # for version management
    "setuptools>=46", "setuptools_scm[toml]>=6.2"
]
build-backend = "setuptools.build_meta"

[project]
name = "dclab"
authors = [
    # In alphabetical order.
    {name = "Benedikt Hartmann"},
    {name = "Eoghan O'Connell"},
    {name = "Maik Herbig"},
    {name = "Maximilian Schlögel"},
    {name = "Nadia Sbaa"},
    {name = "Paul Müller"},
    {name = "Philipp Rosendahl"},
    {name = "Raghava Alajangi"},
]
maintainers = [
    {name = "Paul Müller", email="dev@craban.de"},
]
description = "Library for real-time deformability cytometry (RT-DC)"
readme = "README.rst"
requires-python = ">=3.8, <4"
keywords = ["RT-DC", "deformability", "cytometry"]
classifiers = [
    'Operating System :: OS Independent',
    'Programming Language :: Python :: 3',
    'Topic :: Scientific/Engineering :: Visualization',
    'Intended Audience :: Science/Research',
]
license = {text = "GPL version 2.0 or later"}
dependencies = [
    "h5py>=3.0.0, <4",
    "hdf5plugin>=3.3.1, <5",
    "importlib-resources>=6.0",  # remove when dropping support for Python 3.8
    "numpy>=1.21, <3",  # CVE-2021-33430
    "scipy>=1.10.0, <2",  # CVE-2023-25399
]
dynamic = ["version"]

[project.optional-dependencies]
all = ["dclab[dcor,export,http,s3,tdms]"]
dcor = ["requests>=2.31.0, <3"]  # CVE-2023-32681
export = ["fcswrite>=0.5.0",  # fcs export
          "imageio[ffmpeg]",  # avi export
]
http = ["requests>=2.31.0, <3"]  # CVE-2023-32681
s3 = ["boto3>=1.34.31"]
tdms = ["imageio[ffmpeg]", "nptdms>=0.23.0,<1.9"]


[project.scripts]
dclab-compress = "dclab.cli:compress"
dclab-condense = "dclab.cli:condense"
dclab-join = "dclab.cli:join"
dclab-repack = "dclab.cli:repack"
dclab-split = "dclab.cli:split"
dclab-tdms2rtdc = "dclab.cli:tdms2rtdc [tdms]"
dclab-verify-dataset = "dclab.cli:verify_dataset"

[project.urls]
source = "https://github.com/DC-Analysis/dclab"
tracker = "https://github.com/DC-Analysis/dclab/issues"
documentation = "https://dclab.readthedocs.io/en/stable/"
changelog = "https://dclab.readthedocs.io/en/stable/sec_changelog.html"

# We need the following, because automatic package discovery does not work
# when running cibuildwheel on GitHub Actions (there will be a "wheelhouse"
# directory).
[tool.setuptools]
packages = ["dclab"]

[tool.setuptools_scm]
write_to = "dclab/_version.py"
version_scheme = "post-release"

[tool.cibuildwheel]
# Only build for cpython
build = "cp*"
# Only build for 64bit
archs = "auto64"