From f78f88c04cbbfc08bb134cb5d5e5c7ff518d7f07 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Marie-Ang=C3=A9lique=20Laporte?= Date: Wed, 11 Nov 2020 13:57:21 +0100 Subject: [PATCH] release august 2020 --- peco.obo | 782 ++++++++++++++++++++++--------- peco.owl | 1368 ++++++++++++++++++++++++++++++++++++++++-------------- 2 files changed, 1593 insertions(+), 557 deletions(-) diff --git a/peco.obo b/peco.obo index a334a30..ee3221c 100644 --- a/peco.obo +++ b/peco.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: releases/2018-08-15 +data-version: releases/2020-08-21 date: 12:10:2015 15:21 saved-by: cooperl default-namespace: plant_experimental_conditions_ontology @@ -29,10 +29,6 @@ is_a: BFO:0000002 id: BFO:0000015 is_a: BFO:0000003 -[Term] -id: BFO:0000017 -is_a: BFO:0000020 - [Term] id: BFO:0000019 is_a: BFO:0000020 @@ -41,18 +37,10 @@ is_a: BFO:0000020 id: BFO:0000020 is_a: BFO:0000002 -[Term] -id: BFO:0000023 -is_a: BFO:0000017 - [Term] id: BFO:0000024 is_a: BFO:0000040 -[Term] -id: BFO:0000027 -is_a: BFO:0000040 - [Term] id: BFO:0000029 is_a: BFO:0000141 @@ -69,18 +57,6 @@ is_a: BFO:0000004 id: BFO:0000141 is_a: BFO:0000004 -[Term] -id: CARO:0000003 -is_a: CARO:0000006 - -[Term] -id: CARO:0000006 -is_a: BFO:0000040 - -[Term] -id: CARO:0001010 -is_a: PCO:0000031 - [Term] id: CHEBI:10022 is_a: CHEBI:15734 @@ -115,6 +91,14 @@ is_a: CHEBI:76969 id: CHEBI:131605 is_a: CHEBI:29067 +[Term] +id: CHEBI:131860 +is_a: CHEBI:2580 + +[Term] +id: CHEBI:131862 +is_a: CHEBI:131860 + [Term] id: CHEBI:131927 is_a: CHEBI:36586 @@ -190,6 +174,10 @@ is_a: CHEBI:33232 id: CHEBI:137980 is_a: CHEBI:33250 +[Term] +id: CHEBI:137982 +is_a: CHEBI:25697 + [Term] id: CHEBI:138015 is_a: CHEBI:51061 @@ -241,10 +229,47 @@ id: CHEBI:139588 is_a: CHEBI:30879 is_a: CHEBI:52396 +[Term] +id: CHEBI:142851 +is_a: CHEBI:26044 +is_a: CHEBI:83925 + +[Term] +id: CHEBI:142852 +is_a: CHEBI:142851 + +[Term] +id: CHEBI:142853 +is_a: CHEBI:142851 + +[Term] +id: CHEBI:142854 +is_a: CHEBI:35238 + +[Term] +id: CHEBI:142856 +is_a: CHEBI:35238 + +[Term] +id: CHEBI:142858 +is_a: CHEBI:25696 + +[Term] +id: CHEBI:142859 +is_a: CHEBI:25696 + [Term] id: CHEBI:14321 is_a: CHEBI:33558 +[Term] +id: CHEBI:146293 +is_a: CHEBI:131862 + +[Term] +id: CHEBI:149552 +is_a: CHEBI:23888 + [Term] id: CHEBI:15318 is_a: CHEBI:25810 @@ -256,6 +281,7 @@ is_a: CHEBI:51086 [Term] id: CHEBI:15356 +is_a: CHEBI:26167 is_a: CHEBI:26834 is_a: CHEBI:33704 @@ -290,6 +316,11 @@ is_a: CHEBI:33263 id: CHEBI:15428 is_a: CHEBI:26650 +[Term] +id: CHEBI:156230 +is_a: CHEBI:25477 +is_a: CHEBI:35757 + [Term] id: CHEBI:15693 is_a: CHEBI:35381 @@ -395,6 +426,12 @@ is_a: CHEBI:79388 id: CHEBI:16234 is_a: CHEBI:33693 +[Term] +id: CHEBI:16235 +is_a: CHEBI:20702 +is_a: CHEBI:25810 +is_a: CHEBI:26386 + [Term] id: CHEBI:16240 is_a: CHEBI:24837 @@ -429,7 +466,6 @@ id: CHEBI:16526 is_a: CHEBI:138675 is_a: CHEBI:23014 is_a: CHEBI:64708 -is_a: FOODON:03412972 [Term] id: CHEBI:16541 @@ -622,6 +658,11 @@ is_a: CHEBI:15734 is_a: CHEBI:50584 is_a: CHEBI:64708 +[Term] +id: CHEBI:17792 +is_a: CHEBI:33285 +is_a: CHEBI:37578 + [Term] id: CHEBI:17855 is_a: CHEBI:47778 @@ -685,6 +726,7 @@ is_a: CHEBI:28966 [Term] id: CHEBI:18237 +is_a: CHEBI:26167 is_a: CHEBI:33704 [Term] @@ -794,6 +836,10 @@ is_a: CHEBI:27242 id: CHEBI:20569 is_a: CHEBI:76663 +[Term] +id: CHEBI:20702 +is_a: CHEBI:22527 + [Term] id: CHEBI:20706 is_a: CHEBI:22527 @@ -953,6 +999,7 @@ is_a: CHEBI:83813 [Term] id: CHEBI:22660 +is_a: CHEBI:26167 is_a: CHEBI:33704 is_a: CHEBI:66873 @@ -1341,7 +1388,7 @@ is_a: CHEBI:35352 [Term] id: CHEBI:24469 -is_a: CHEBI:36684 +is_a: CHEBI:17792 [Term] id: CHEBI:24471 @@ -1349,7 +1396,7 @@ is_a: CHEBI:33675 [Term] id: CHEBI:24472 -is_a: CHEBI:36684 +is_a: CHEBI:17792 [Term] id: CHEBI:24473 @@ -2202,7 +2249,7 @@ is_a: CHEBI:35307 [Term] id: CHEBI:27311 -is_a: CHEBI:25212 +is_a: CHEBI:76924 [Term] id: CHEBI:27314 @@ -2327,6 +2374,7 @@ is_a: CHEBI:28966 [Term] id: CHEBI:27897 +is_a: CHEBI:26167 is_a: CHEBI:33704 is_a: CHEBI:33856 is_a: CHEBI:38631 @@ -2399,6 +2447,7 @@ is_a: CHEBI:33350 [Term] id: CHEBI:28694 is_a: CHEBI:33366 +is_a: CHEBI:88184 [Term] id: CHEBI:28741 @@ -2460,7 +2509,6 @@ is_a: CHEBI:25223 [Term] id: CHEBI:28938 is_a: CHEBI:35106 -is_a: CHEBI:35274 is_a: CHEBI:50313 is_a: CHEBI:60242 @@ -2624,6 +2672,10 @@ id: CHEBI:29785 is_a: CHEBI:33246 is_a: CHEBI:51144 +[Term] +id: CHEBI:29792 +is_a: CHEBI:33246 + [Term] id: CHEBI:29805 is_a: CHEBI:36059 @@ -2946,7 +2998,6 @@ id: CHEBI:33262 is_a: CHEBI:24835 is_a: CHEBI:25806 is_a: CHEBI:33259 -is_a: FOODON:03412972 [Term] id: CHEBI:33263 @@ -3702,6 +3753,10 @@ is_a: CHEBI:24432 id: CHEBI:35223 is_a: CHEBI:51086 +[Term] +id: CHEBI:35230 +is_a: CHEBI:33292 + [Term] id: CHEBI:35237 is_a: CHEBI:35238 @@ -4082,6 +4137,16 @@ is_a: CHEBI:35903 id: CHEBI:35903 is_a: CHEBI:29067 +[Term] +id: CHEBI:35923 +is_a: CHEBI:24651 + +[Term] +id: CHEBI:35924 +is_a: CHEBI:35923 +is_a: CHEBI:36963 +is_a: CHEBI:37863 + [Term] id: CHEBI:35942 is_a: CHEBI:23888 @@ -4167,6 +4232,15 @@ id: CHEBI:36309 is_a: CHEBI:26932 is_a: CHEBI:47882 +[Term] +id: CHEBI:36326 +is_a: CHEBI:27208 + +[Term] +id: CHEBI:36329 +is_a: CHEBI:36326 +is_a: CHEBI:61051 + [Term] id: CHEBI:36336 is_a: CHEBI:25477 @@ -4286,13 +4360,8 @@ is_a: CHEBI:72695 [Term] id: CHEBI:36683 +is_a: CHEBI:17792 is_a: CHEBI:23117 -is_a: CHEBI:36684 - -[Term] -id: CHEBI:36684 -is_a: CHEBI:33285 -is_a: CHEBI:37578 [Term] id: CHEBI:36688 @@ -4357,7 +4426,6 @@ is_a: CHEBI:33304 [Term] id: CHEBI:36908 is_a: CHEBI:33583 -is_a: FOODON:03412972 [Term] id: CHEBI:36914 @@ -4394,13 +4462,13 @@ is_a: CHEBI:35352 [Term] id: CHEBI:37141 +is_a: CHEBI:17792 is_a: CHEBI:22928 -is_a: CHEBI:36684 [Term] id: CHEBI:37143 +is_a: CHEBI:17792 is_a: CHEBI:24062 -is_a: CHEBI:36684 [Term] id: CHEBI:37163 @@ -4480,7 +4548,7 @@ is_a: CHEBI:35352 [Term] id: CHEBI:37602 -is_a: CHEBI:50860 +is_a: CHEBI:78840 [Term] id: CHEBI:37604 @@ -4535,6 +4603,10 @@ id: CHEBI:37848 is_a: CHEBI:24621 is_a: CHEBI:26155 +[Term] +id: CHEBI:37863 +is_a: CHEBI:36962 + [Term] id: CHEBI:37949 is_a: CHEBI:25693 @@ -5293,10 +5365,6 @@ is_a: CHEBI:52209 id: CHEBI:50905 is_a: CHEBI:52209 -[Term] -id: CHEBI:50906 -is_a: BFO:0000023 - [Term] id: CHEBI:50910 is_a: CHEBI:52209 @@ -5346,6 +5414,7 @@ is_a: CHEBI:24866 [Term] id: CHEBI:51084 +is_a: CHEBI:24835 is_a: CHEBI:51082 [Term] @@ -5355,7 +5424,6 @@ is_a: CHEBI:50906 [Term] id: CHEBI:51143 is_a: CHEBI:33302 -is_a: FOODON:03412972 [Term] id: CHEBI:51144 @@ -5423,7 +5491,7 @@ is_a: CHEBI:25696 [Term] id: CHEBI:52136 -is_a: CHEBI:26044 +is_a: CHEBI:60911 [Term] id: CHEBI:52206 @@ -5656,6 +5724,10 @@ is_a: CHEBI:29067 id: CHEBI:59999 is_a: CHEBI:24431 +[Term] +id: CHEBI:60004 +is_a: CHEBI:59999 + [Term] id: CHEBI:60038 is_a: CHEBI:25696 @@ -5681,6 +5753,10 @@ is_a: CHEBI:35286 id: CHEBI:60466 is_a: CHEBI:27369 +[Term] +id: CHEBI:60575 +is_a: CHEBI:24527 + [Term] id: CHEBI:60809 is_a: CHEBI:52217 @@ -5693,6 +5769,10 @@ is_a: CHEBI:52210 id: CHEBI:60895 is_a: CHEBI:33558 +[Term] +id: CHEBI:60911 +is_a: CHEBI:60004 + [Term] id: CHEBI:60926 is_a: CHEBI:28963 @@ -5705,6 +5785,10 @@ is_a: CHEBI:23849 id: CHEBI:61015 is_a: CHEBI:64909 +[Term] +id: CHEBI:61051 +is_a: CHEBI:35924 + [Term] id: CHEBI:61120 is_a: CHEBI:33833 @@ -5730,7 +5814,6 @@ is_a: CHEBI:64911 [Term] id: CHEBI:62031 -is_a: CHEBI:26167 is_a: CHEBI:35238 [Term] @@ -5780,7 +5863,6 @@ is_a: CHEBI:51084 [Term] id: CHEBI:63038 -is_a: CHEBI:24835 is_a: CHEBI:47704 is_a: CHEBI:51084 @@ -6401,6 +6483,10 @@ is_a: CHEBI:25384 id: CHEBI:79091 is_a: CHEBI:76812 +[Term] +id: CHEBI:79314 +is_a: CHEBI:33232 + [Term] id: CHEBI:79387 is_a: CHEBI:24834 @@ -6583,25 +6669,24 @@ id: CHEBI:91007 is_a: CHEBI:29067 [Term] -id: ENVO:00000000 -is_a: ENVO:01000813 +id: ENVO:00000063 +is_a: ENVO:01000685 [Term] -id: ENVO:00000012 -is_a: ENVO:00000000 +id: ENVO:00000097 +is_a: ENVO:01000752 [Term] -id: ENVO:00000063 -is_a: ENVO:00000000 +id: ENVO:00000191 +is_a: ENVO:01000813 [Term] -id: ENVO:00000097 -is_a: ENVO:01000752 +id: ENVO:00000194 +is_a: ENVO:00010483 [Term] -id: ENVO:00000304 -is_a: ENVO:00000012 -is_a: ENVO:01000635 +id: ENVO:00000339 +is_a: ENVO:01001687 [Term] id: ENVO:00000428 @@ -6619,11 +6704,6 @@ is_a: ENVO:01000814 id: ENVO:00001998 is_a: ENVO:00010483 -[Term] -id: ENVO:00002004 -is_a: BFO:0000030 -is_a: ENVO:00002297 - [Term] id: ENVO:00002005 is_a: ENVO:01000797 @@ -6632,6 +6712,11 @@ is_a: ENVO:01000797 id: ENVO:00002006 is_a: ENVO:01000815 +[Term] +id: ENVO:00002030 +is_a: ENVO:00000428 +is_a: ENVO:01001787 + [Term] id: ENVO:00002229 is_a: ENVO:00001998 @@ -6640,10 +6725,6 @@ is_a: ENVO:00001998 id: ENVO:00002262 is_a: ENVO:00001998 -[Term] -id: ENVO:00002297 -is_a: BFO:0000040 - [Term] id: ENVO:00002982 is_a: ENVO:00010483 @@ -6658,15 +6739,7 @@ is_a: BFO:0000024 [Term] id: ENVO:00010504 -is_a: ENVO:01000281 - -[Term] -id: ENVO:01000009 -is_a: ENVO:00002004 - -[Term] -id: ENVO:01000010 -is_a: ENVO:00002004 +is_a: ENVO:01001684 [Term] id: ENVO:01000016 @@ -6702,7 +6775,7 @@ is_a: ENVO:01000797 [Term] id: ENVO:01000267 -is_a: ENVO:01000281 +is_a: ENVO:01001678 [Term] id: ENVO:01000268 @@ -6710,7 +6783,7 @@ is_a: ENVO:01000266 [Term] id: ENVO:01000281 -is_a: ENVO:00000000 +is_a: BFO:0000040 [Term] id: ENVO:01000303 @@ -6721,9 +6794,14 @@ id: ENVO:01000317 is_a: ENVO:01000997 is_a: ENVO:01000998 +[Term] +id: ENVO:01000323 +is_a: ENVO:01000543 +is_a: ENVO:01000544 + [Term] id: ENVO:01000324 -is_a: ENVO:00010504 +is_a: ENVO:01001483 [Term] id: ENVO:01000325 @@ -6733,6 +6811,14 @@ is_a: ENVO:01001273 id: ENVO:01000408 is_a: BFO:0000029 +[Term] +id: ENVO:01000543 +is_a: ENVO:01001678 + +[Term] +id: ENVO:01000544 +is_a: ENVO:01001677 + [Term] id: ENVO:01000552 is_a: ENVO:01000554 @@ -6740,24 +6826,41 @@ is_a: ENVO:01000554 [Term] id: ENVO:01000554 is_a: ENVO:01000797 +is_a: ENVO:2000045 [Term] id: ENVO:01000635 is_a: ENVO:01000324 -is_a: ENVO:01001311 +is_a: ENVO:01001782 [Term] id: ENVO:01000637 -is_a: ENVO:00002297 is_a: ENVO:00010483 +[Term] +id: ENVO:01000638 +is_a: ENVO:01000639 + +[Term] +id: ENVO:01000639 +is_a: ENVO:01000281 + +[Term] +id: ENVO:01000646 +is_a: ENVO:01000639 +is_a: ENVO:01001275 + +[Term] +id: ENVO:01000685 +is_a: ENVO:01001476 + [Term] id: ENVO:01000703 is_a: ENVO:01000875 [Term] id: ENVO:01000724 -is_a: ENVO:03000043 +is_a: ENVO:01001510 [Term] id: ENVO:01000739 @@ -6769,7 +6872,11 @@ is_a: ENVO:01001199 [Term] id: ENVO:01000797 -is_a: ENVO:00010483 +is_a: ENVO:02000140 + +[Term] +id: ENVO:01000798 +is_a: ENVO:02000140 [Term] id: ENVO:01000799 @@ -6782,29 +6889,32 @@ is_a: ENVO:01000799 [Term] id: ENVO:01000804 is_a: BFO:0000030 -is_a: ENVO:00002297 [Term] id: ENVO:01000813 is_a: BFO:0000024 -is_a: ENVO:00002297 [Term] id: ENVO:01000814 -is_a: ENVO:01001125 +is_a: ENVO:00010483 [Term] id: ENVO:01000815 -is_a: ENVO:00010483 +is_a: ENVO:02000140 [Term] id: ENVO:01000817 -is_a: ENVO:01000813 -is_a: ENVO:01001110 +is_a: ENVO:01001479 +is_a: ENVO:01001784 [Term] id: ENVO:01000819 -is_a: ENVO:01000813 +is_a: ENVO:01001477 + +[Term] +id: ENVO:01000820 +is_a: ENVO:01001479 +is_a: ENVO:01001784 [Term] id: ENVO:01000828 @@ -6820,7 +6930,7 @@ is_a: ENVO:01000703 [Term] id: ENVO:01000831 -is_a: ENVO:01000010 +is_a: ENVO:01001690 [Term] id: ENVO:01000832 @@ -6836,7 +6946,7 @@ is_a: ENVO:03000010 [Term] id: ENVO:01000981 -is_a: ENVO:01001334 +is_a: ENVO:01001747 [Term] id: ENVO:01000982 @@ -6856,34 +6966,21 @@ id: ENVO:01001044 is_a: ENVO:01000997 is_a: ENVO:01000998 -[Term] -id: ENVO:01001055 -is_a: ENVO:01001110 - [Term] id: ENVO:01001110 is_a: ENVO:01000254 -[Term] -id: ENVO:01001125 -is_a: ENVO:00010483 - [Term] id: ENVO:01001164 is_a: PATO:0001241 -[Term] -id: ENVO:01001191 -is_a: ENVO:01000325 -is_a: ENVO:01001310 - [Term] id: ENVO:01001199 is_a: ENVO:01000408 [Term] id: ENVO:01001273 -is_a: ENVO:01000281 +is_a: ENVO:01001678 [Term] id: ENVO:01001275 @@ -6895,16 +6992,7 @@ is_a: ENVO:01000408 [Term] id: ENVO:01001308 -is_a: ENVO:01000813 - -[Term] -id: ENVO:01001309 -is_a: ENVO:01001310 - -[Term] -id: ENVO:01001310 -is_a: ENVO:00010504 -is_a: ENVO:01001273 +is_a: ENVO:01001477 [Term] id: ENVO:01001311 @@ -6915,31 +7003,126 @@ is_a: ENVO:01001275 id: ENVO:01001334 is_a: ENVO:03000010 +[Term] +id: ENVO:01001476 +is_a: ENVO:01001477 + +[Term] +id: ENVO:01001477 +is_a: ENVO:01001479 +is_a: ENVO:01001784 + +[Term] +id: ENVO:01001478 +is_a: ENVO:01001479 +is_a: ENVO:01001784 + +[Term] +id: ENVO:01001479 +is_a: ENVO:01000813 + +[Term] +id: ENVO:01001483 +is_a: ENVO:00010504 + +[Term] +id: ENVO:01001510 +is_a: ENVO:03000043 + +[Term] +id: ENVO:01001645 +is_a: ENVO:01001478 + +[Term] +id: ENVO:01001677 +is_a: ENVO:01001678 +is_a: ENVO:01001684 + +[Term] +id: ENVO:01001678 +is_a: ENVO:01000281 + +[Term] +id: ENVO:01001682 +is_a: ENVO:01001689 + +[Term] +id: ENVO:01001684 +is_a: ENVO:01000281 + +[Term] +id: ENVO:01001686 +is_a: BFO:0000030 + +[Term] +id: ENVO:01001687 +is_a: ENVO:01001686 + +[Term] +id: ENVO:01001688 +is_a: ENVO:01001686 + +[Term] +id: ENVO:01001689 +is_a: ENVO:01001688 + +[Term] +id: ENVO:01001690 +is_a: ENVO:01001688 + +[Term] +id: ENVO:01001691 +is_a: ENVO:01001686 + +[Term] +id: ENVO:01001747 +is_a: ENVO:01001334 + +[Term] +id: ENVO:01001781 +is_a: ENVO:00000191 + +[Term] +id: ENVO:01001782 +is_a: ENVO:01001785 + +[Term] +id: ENVO:01001784 +is_a: ENVO:01000813 + +[Term] +id: ENVO:01001785 +is_a: ENVO:01001311 +is_a: ENVO:01001483 + +[Term] +id: ENVO:01001787 +is_a: ENVO:01001110 + +[Term] +id: ENVO:01001838 +is_a: ENVO:00000428 + [Term] id: ENVO:02000054 is_a: ENVO:02000055 [Term] id: ENVO:02000055 -is_a: ENVO:01000009 +is_a: FOODON:00002403 [Term] -id: ENVO:02500000 -is_a: BFO:0000015 +id: ENVO:02000140 +is_a: ENVO:00010483 [Term] -id: ENVO:02500001 -is_a: ENVO:02500000 +id: ENVO:02500000 +is_a: BFO:0000015 [Term] id: ENVO:02500002 -is_a: ENVO:02500031 is_a: ENVO:03000010 -[Term] -id: ENVO:02500003 -is_a: ENVO:02500000 - [Term] id: ENVO:02500031 is_a: ENVO:02500000 @@ -6952,6 +7135,11 @@ is_a: ENVO:02500000 id: ENVO:03000043 is_a: ENVO:02500000 +[Term] +id: ENVO:04000010 +is_a: ENVO:01001311 +is_a: ENVO:01001483 + [Term] id: ENVO:09200000 is_a: PATO:0000146 @@ -6987,32 +7175,36 @@ id: ENVO:09200015 is_a: PATO:0015009 [Term] -id: FOODON:00001002 -is_a: FOODON:03400361 +id: ENVO:09200017 +is_a: PATO:0000025 [Term] -id: FOODON:00001714 -is_a: FOODON:00001002 +id: ENVO:2000045 +is_a: ENVO:00010483 [Term] -id: FOODON:03400361 -is_a: BFO:0000040 +id: GO:0003674 +is_a: BFO:0000015 [Term] -id: FOODON:03411041 -is_a: FOODON:00001714 +id: GO:0003824 +is_a: GO:0003674 [Term] -id: FOODON:03412972 -is_a: FOODON:03411041 +id: GO:0008150 +is_a: BFO:0000015 [Term] -id: GO:0003674 -is_a: BFO:0000015 +id: GO:0016301 +is_a: GO:0016772 [Term] -id: GO:0008150 -is_a: BFO:0000015 +id: GO:0016740 +is_a: GO:0003824 + +[Term] +id: GO:0016772 +is_a: GO:0016740 [Term] id: NCBITaxon:101162 @@ -7040,7 +7232,7 @@ is_a: NCBITaxon:5238 [Term] id: NCBITaxon:10880 -is_a: NCBITaxon:35325 +is_a: NCBITaxon:2559587 [Term] id: NCBITaxon:10985 @@ -7108,7 +7300,7 @@ is_a: NCBITaxon:6231 [Term] id: NCBITaxon:119163 -is_a: NCBITaxon:35278 +is_a: NCBITaxon:2559587 [Term] id: NCBITaxon:12036 @@ -7186,10 +7378,6 @@ is_a: NCBITaxon:5279 id: NCBITaxon:1338369 is_a: NCBITaxon:8287 -[Term] -id: NCBITaxon:134362 -is_a: NCBITaxon:451867 - [Term] id: NCBITaxon:135614 is_a: NCBITaxon:1236 @@ -7222,13 +7410,9 @@ is_a: NCBITaxon:715962 id: NCBITaxon:147550 is_a: NCBITaxon:715989 -[Term] -id: NCBITaxon:148303 -is_a: NCBITaxon:81093 - [Term] id: NCBITaxon:148305 -is_a: NCBITaxon:148303 +is_a: NCBITaxon:48558 [Term] id: NCBITaxon:155619 @@ -7300,7 +7484,7 @@ is_a: NCBITaxon:6656 [Term] id: NCBITaxon:1980410 -is_a: NCBITaxon:35301 +is_a: NCBITaxon:2497576 [Term] id: NCBITaxon:1980418 @@ -7328,7 +7512,7 @@ is_a: NCBITaxon:2092 [Term] id: NCBITaxon:2169577 -is_a: NCBITaxon:35278 +is_a: NCBITaxon:2559587 [Term] id: NCBITaxon:222543 @@ -7342,6 +7526,30 @@ is_a: NCBITaxon:147550 id: NCBITaxon:228882 is_a: NCBITaxon:81093 +[Term] +id: NCBITaxon:2497569 +is_a: NCBITaxon:2559587 + +[Term] +id: NCBITaxon:2497571 +is_a: NCBITaxon:2497569 + +[Term] +id: NCBITaxon:2497576 +is_a: NCBITaxon:2497571 + +[Term] +id: NCBITaxon:2502719 +is_a: NCBITaxon:5125 + +[Term] +id: NCBITaxon:2528436 +is_a: NCBITaxon:639021 + +[Term] +id: NCBITaxon:2559587 +is_a: NCBITaxon:10239 + [Term] id: NCBITaxon:268499 is_a: NCBITaxon:37573 @@ -7350,6 +7558,14 @@ is_a: NCBITaxon:37573 id: NCBITaxon:269767 is_a: NCBITaxon:90723 +[Term] +id: NCBITaxon:2698737 +is_a: NCBITaxon:2759 + +[Term] +id: NCBITaxon:2726947 +is_a: NCBITaxon:451867 + [Term] id: NCBITaxon:27439 is_a: NCBITaxon:71528 @@ -7364,7 +7580,7 @@ is_a: NCBITaxon:1224 [Term] id: NCBITaxon:284134 -is_a: NCBITaxon:162454 +is_a: NCBITaxon:2502719 [Term] id: NCBITaxon:284135 @@ -7496,7 +7712,7 @@ is_a: NCBITaxon:33213 [Term] id: NCBITaxon:33634 -is_a: NCBITaxon:2759 +is_a: NCBITaxon:2698737 [Term] id: NCBITaxon:337 @@ -7526,17 +7742,9 @@ is_a: NCBITaxon:166009 id: NCBITaxon:347 is_a: NCBITaxon:338 -[Term] -id: NCBITaxon:35278 -is_a: NCBITaxon:439488 - -[Term] -id: NCBITaxon:35301 -is_a: NCBITaxon:439488 - [Term] id: NCBITaxon:35325 -is_a: NCBITaxon:10239 +is_a: NCBITaxon:2559587 [Term] id: NCBITaxon:35493 @@ -7618,10 +7826,6 @@ is_a: NCBITaxon:40080 id: NCBITaxon:437488 is_a: NCBITaxon:437487 -[Term] -id: NCBITaxon:439488 -is_a: NCBITaxon:10239 - [Term] id: NCBITaxon:4447 is_a: NCBITaxon:1437183 @@ -7658,10 +7862,6 @@ is_a: NCBITaxon:452333 id: NCBITaxon:45926 is_a: NCBITaxon:33284 -[Term] -id: NCBITaxon:459364 -is_a: NCBITaxon:63190 - [Term] id: NCBITaxon:46005 is_a: NCBITaxon:45926 @@ -7718,6 +7918,10 @@ is_a: NCBITaxon:121069 id: NCBITaxon:4797 is_a: NCBITaxon:4782 +[Term] +id: NCBITaxon:48558 +is_a: NCBITaxon:2528436 + [Term] id: NCBITaxon:4890 is_a: NCBITaxon:451864 @@ -7822,13 +8026,17 @@ is_a: NCBITaxon:33208 id: NCBITaxon:6231 is_a: NCBITaxon:1206794 +[Term] +id: NCBITaxon:6236 +is_a: NCBITaxon:119089 + [Term] id: NCBITaxon:62916 is_a: NCBITaxon:452283 [Term] id: NCBITaxon:6300 -is_a: NCBITaxon:119089 +is_a: NCBITaxon:6236 [Term] id: NCBITaxon:6303 @@ -7846,14 +8054,6 @@ is_a: NCBITaxon:654580 id: NCBITaxon:63189 is_a: NCBITaxon:125628 -[Term] -id: NCBITaxon:63190 -is_a: NCBITaxon:63236 - -[Term] -id: NCBITaxon:63236 -is_a: NCBITaxon:5250 - [Term] id: NCBITaxon:639021 is_a: NCBITaxon:222544 @@ -8032,7 +8232,7 @@ is_a: NCBITaxon:451868 [Term] id: NCBITaxon:93133 -is_a: NCBITaxon:134362 +is_a: NCBITaxon:2726947 [Term] id: NCBITaxon:94399 @@ -8052,7 +8252,6 @@ is_a: PATO:0001546 [Term] id: PATO:0000051 -is_a: BFO:0000019 is_a: PATO:0001241 [Term] @@ -8070,20 +8269,15 @@ is_a: PATO:0000051 [Term] id: PATO:0000146 is_a: PATO:0001018 -is_a: PATO:0001237 [Term] id: PATO:0000386 is_a: PATO:0000048 is_a: PATO:0002305 -[Term] -id: PATO:0000970 -is_a: PATO:0000141 - [Term] id: PATO:0000973 -is_a: PATO:0000970 +is_a: PATO:0000141 [Term] id: PATO:0000984 @@ -8094,26 +8288,28 @@ id: PATO:0001018 is_a: PATO:0001241 [Term] -id: PATO:0001237 +id: PATO:0001241 is_a: BFO:0000019 +is_a: PATO:0000001 [Term] -id: PATO:0001241 -is_a: PATO:0000001 +id: PATO:0001543 +is_a: PATO:0001546 + +[Term] +id: PATO:0001545 +is_a: PATO:0001543 [Term] id: PATO:0001546 -is_a: PATO:0001237 is_a: PATO:0002198 [Term] id: PATO:0001547 -is_a: PATO:0001237 is_a: PATO:0002198 [Term] id: PATO:0001548 -is_a: PATO:0001237 is_a: PATO:0002198 [Term] @@ -8146,9 +8342,12 @@ id: PATO:0015010 is_a: PATO:0002305 is_a: PATO:0015009 +[Term] +id: PATO:0015021 +is_a: PATO:0001018 + [Term] id: PCO:0000000 -is_a: BFO:0000027 is_a: PCO:0000031 [Term] @@ -8157,25 +8356,16 @@ is_a: PCO:0000018 [Term] id: PCO:0000002 -is_a: PCO:0000028 is_a: PCO:0000029 [Term] id: PCO:0000018 is_a: PCO:0000000 -[Term] -id: PCO:0000028 -is_a: PCO:0000000 - [Term] id: PCO:0000029 is_a: PCO:0000000 -[Term] -id: PCO:0000031 -is_a: BFO:0000040 - [Term] id: PECO:0001001 name: plant exposure @@ -8283,6 +8473,7 @@ synonym: "inorganic anion treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:54 xref: PECO_GIT:54 is_a: PECO:0001004 ! inorganic chemical exposure +is_a: RO:0002310 created_by: cooperl creation_date: 2013-04-11T12:29:25Z @@ -8290,12 +8481,13 @@ creation_date: 2013-04-11T12:29:25Z id: PECO:0001010 name: carbohydrate exposure alt_id: EO:0001010 -def: "An organic chemical exposure (PECO:0001003) involving the application of a carbohydrate (CHEBI:16646) or mixture of carbohydratePECO:cooperl:16646, PECO:cooperl]" [] +def: "An organic chemical exposure (PECO:0001003) involving the application of a carbohydrate (CHEBI:16646) or mixture of carbohydrates." [PECO:cooperl] comment: Carbohydrate (CHEBI:16646) is defined as the generic term 'carbohydrate' includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. synonym: "carbohydrate treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:9 xref: PECO_GIT:9 is_a: PECO:0001003 ! organic chemical exposure +is_a: RO:0002310 created_by: moorel creation_date: 2013-04-11T13:43:22Z @@ -8370,6 +8562,7 @@ alt_id: EO:0001016 def: "An inorganic chemical exposure (PECO:0001004) involving the application of a cation (CHEBI:36916) or mixture of cations ." [CHEBI:36916, PECO:cooperl] synonym: "inorganic cation treatment (narrow)" NARROW [] is_a: PECO:0001004 ! inorganic chemical exposure +is_a: RO:0002310 created_by: cooperl creation_date: 2013-04-12T11:42:16Z @@ -8417,6 +8610,7 @@ synonym: "carbon dioxide treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:28 xref: PECO_GIT:28 is_a: PECO:0001055 ! inorganic gas exposure +is_a: RO:0002310 created_by: cooperl creation_date: 2013-04-12T12:41:25Z @@ -8568,7 +8762,7 @@ id: PECO:0001033 name: parasitic wasp insect plant exposure alt_id: EO:0001033 def: "A Hymenoptera insect plant exposure (PECO:0001032) that involves exposure to parasitic wasps." [PECO:cooperl] -comment: Parasitic wasp (or parasitoid wasp) refers to a large evolutionary grade of hymenopteran superfamilies, mainly in the Apocrita (from wikipedia). +comment: Parasitic wasp (or parasitoid wasp) refers to a large evolutionary grade of hymenopteran superfamilies, mainly in the Apocrita. {xref="Wikipedia:Parasitoid_wasp"} synonym: "parasitic wasp insect plant treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:38 xref: PECO_GIT:38 @@ -8916,6 +9110,7 @@ synonym: "PEG treatment (exact)" EXACT [] synonym: "poly(ethylene glycol) treatment (exact)" EXACT [] synonym: "polyethylene glycol treatment (narrow)" NARROW [] is_a: PECO:0001003 ! organic chemical exposure +is_a: RO:0002310 created_by: cooperl creation_date: 2014-06-04T10:14:09Z @@ -8941,6 +9136,77 @@ xref: PECO_GIT:120 is_a: PECO:0007262 ! in vitro solid growth medium exposure creation_date: 2017-08-08T14:58:32Z +[Term] +id: PECO:0001064 +name: potassium fertilizer exposure +def: "A chemical fertilizer exposure (PECO:0007086) involving the use of potassium fertilizer as a supplement to study plant responses." [PECO:cooperl] +xref: PECO_GIT:112 +is_a: PECO:0007086 ! chemical fertilizer exposure +created_by: Laurel_Cooper +creation_date: 2018-10-18T17:40:45Z + +[Term] +id: PECO:0001065 +name: potassium chloride exposure +def: "A potassium fertilizer exposure (PECO:0001064) involving the use of potassium chloride fertilizer as a supplement to study plant responses." [PECO:cooperl] +synonym: "muriate of potash exposure (related)" RELATED [] +xref: PECO_GIT:112 +is_a: PECO:0001064 ! potassium fertilizer exposure +created_by: Laurel_Cooper +creation_date: 2018-10-18T17:51:54Z + +[Term] +id: PECO:0001066 +name: nematicide exposure +def: "A pesticide exposure (PECO:0007167) involving the application of a nematicide; a chemical entity or mixture of chemical entities to kill plant-parasitic nematodes." [] +xref: PECO_GIT:113 +is_a: PECO:0007167 ! pesticide exposure +created_by: Laurel_Cooper +creation_date: 2018-10-18T18:51:16Z + +[Term] +id: PECO:0001067 +name: castor meal exposure +def: "A natural fertilizer exposure (PECO:0007087) which is the application of castor meal." [PECO:cooperl] +comment: Castor meal is a by-product of castor oil production from seeds of the Castor (Ricinus communis) plant and has a high nitrogen content. +synonym: "castor meal treatment (exact)" EXACT [] +xref: PECO_GIT:115 +is_a: PECO:0007087 ! natural fertilizer exposure +created_by: cooperl +creation_date: 2019-03-22T18:57:37Z + +[Term] +id: PECO:0001068 +name: rapeseed meal exposure +def: "A natural fertilizer exposure (PECO:0007087) which is the application of rapeseed meal." [] +comment: Rapeseed meal is a by-product of rapeseed oil production from seeds of the Rapeseed (Brassica napus L.) plant and has a high protein content. +synonym: "rape cake exposure (narrow)" NARROW [] +synonym: "rapeseed cake exposure (narrow)" NARROW [] +xref: PECO_GIT:117 +is_a: PECO:0007087 ! natural fertilizer exposure +created_by: cooperl +creation_date: 2019-03-22T20:43:53Z + +[Term] +id: PECO:0001069 +name: green manure exposure +def: "A natural fertilizer exposure (PECO:0007087) which is the application of a green manure." [PECO:cooperl] +comment: Green manure is created by leaving uprooted or sown crop parts to wither on a field so that they serve as a mulch and soil amendment. The plants used for green manure are often cover crops grown primarily for this purpose. {xref="Wikipedia:Green_manure"} +xref: PECO_GIT:116 +is_a: PECO:0007087 ! natural fertilizer exposure +created_by: cooperl +creation_date: 2019-03-22T21:10:04Z + +[Term] +id: PECO:0001070 +name: calcium carbonate exposure +def: "A salt exposure (PECO:0007185) which is a treatment with calcium carbonate (CHEBI:3311) in order to raise the pH of the growing media." [PECO:cooperl] +synonym: "lime exposure (broad)" BROAD [] +is_a: PECO:0007185 ! salt exposure +relationship: part_of PECO:0007133 ! basic pH growth media environment exposure +created_by: cooperl +creation_date: 2019-09-20T22:36:52Z + [Term] id: PECO:0007001 name: UV-B light exposure @@ -9136,6 +9402,7 @@ synonym: "Liliopsida treatment (narrow)" NARROW [] synonym: "monocot (related)" RELATED [] synonym: "monocotyledon (related)" RELATED [] is_a: PECO:0007005 ! Viridiplantae plant exposure +is_a: RO:0002310 [Term] id: PECO:0007023 @@ -9290,6 +9557,7 @@ synonym: "antibiotic treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:70 xref: PECO_GIT:69 is_a: PECO:0007189 ! chemical exposure +is_a: RO:0002310 [Term] id: PECO:0007043 @@ -9308,6 +9576,7 @@ synonym: "mineral treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:52 xref: PECO_GIT:52 is_a: PECO:0001004 ! inorganic chemical exposure +is_a: RO:0002310 [Term] id: PECO:0007045 @@ -9579,6 +9848,7 @@ synonym: "basidiomycetes (related)" RELATED [] synonym: "Basidiomycota treatment (narrow)" NARROW [] xref: NCBI_Taxon_ID:5204 is_a: PECO:0007233 ! fungal plant exposure +is_a: RO:0002310 [Term] id: PECO:0007074 @@ -9680,6 +9950,7 @@ alt_id: EO:0007085 def: "A plant nutrient exposure (PECO:0007241) involving the use of a fertilizer, a combination of plant nutrients." [Gramene:pankaj_jaiswal] synonym: "fertilizer treatment (narrow)" NARROW [] is_a: PECO:0007241 ! plant nutrient exposure +is_a: RO:0002310 [Term] id: PECO:0007086 @@ -9713,6 +9984,7 @@ is_a: PECO:0007073 ! Basidiomycota exposure id: PECO:0007089 name: bone meal exposure alt_id: EO:0007089 +def: "A natural fertilizer exposure (PECO:0007087) which is the application of bone meal." [] synonym: "bone meal treatment (narrow)" NARROW [] is_a: PECO:0007087 ! natural fertilizer exposure @@ -9729,6 +10001,7 @@ is_a: PECO:0007406 ! nitrate exposure id: PECO:0007091 name: seaweed extract exposure alt_id: EO:0007091 +def: "A natural fertilizer exposure (PECO:0007087) which is the application of seaweed extract." [] synonym: "seaweed extract treatment (narrow)" NARROW [] is_a: PECO:0007087 ! natural fertilizer exposure @@ -9736,6 +10009,7 @@ is_a: PECO:0007087 ! natural fertilizer exposure id: PECO:0007092 name: wood ash exposure alt_id: EO:0007092 +def: "A natural fertilizer exposure (PECO:0007087) which is the application of wood ash." [] synonym: "wood ash treatment (narrow)" NARROW [] is_a: PECO:0007087 ! natural fertilizer exposure @@ -9743,6 +10017,7 @@ is_a: PECO:0007087 ! natural fertilizer exposure id: PECO:0007093 name: fish meal exposure alt_id: EO:0007093 +def: "A natural fertilizer exposure (PECO:0007087) which is the application of fish meal." [] synonym: "fish meal treatment (narrow)" NARROW [] is_a: PECO:0007087 ! natural fertilizer exposure @@ -9862,6 +10137,7 @@ synonym: "chromophyta (related)" RELATED [] synonym: "heterokont (related)" RELATED [] synonym: "Stramenopiles treatment (narrow)" NARROW [] is_a: PECO:0007357 ! biotic plant exposure +is_a: RO:0002310 [Term] id: PECO:0007107 @@ -9872,6 +10148,7 @@ synonym: "ascomycetes (related)" RELATED [] synonym: "Ascomycota treatment (narrow)" NARROW [] xref: NCBI_Taxon_ID:4890 is_a: PECO:0007233 ! fungal plant exposure +is_a: RO:0002310 [Term] id: PECO:0007108 @@ -9898,6 +10175,7 @@ def: "Treatment involving the exposure of plant to the pathogenic double strande synonym: "dsRNA nonenveloped viruses (related)" RELATED [] synonym: "dsRNA virus treatment (narrow)" NARROW [] is_a: PECO:0007210 ! virus plant exposure +is_a: RO:0002310 [Term] id: PECO:0007111 @@ -10249,10 +10527,11 @@ id: PECO:0007151 name: radiation exposure alt_id: EO:0007151 def: "A physical plant exposure (PECO:0007316) involving an exposure with a radiation type, intensity or quantity." [Gramene:pankaj_jaiswal, PECO:cooperl] -comment: EMR is classified according to the frequency of its wave. The electromagnetic spectrum, in order of increasing frequency and decreasing wavelength, consists of radio waves, microwaves, infrared radiation, visible light, ultraviolet radiation, X-rays and gamma rays. (from Wikipedia). +comment: Electromagnetic radiation is classified according to the frequency of its waves. The electromagnetic spectrum, in order of increasing frequency and decreasing wavelength, consists of radio waves, microwaves, infrared radiation, visible light, ultraviolet radiation, X-rays and gamma rays. {xref="Wikipedia:Electromagnetic_radiation"} synonym: "light regimen (related)" RELATED [] synonym: "radiation treatment (narrow)" NARROW [] is_a: PECO:0007316 ! physical plant exposure +is_a: RO:0002310 [Term] id: PECO:0007152 @@ -10292,6 +10571,7 @@ name: clay soil exposure alt_id: EO:0007156 synonym: "clay soil treatment (narrow)" NARROW [] is_a: PECO:0007155 ! soil type exposure +is_a: RO:0002310 [Term] id: PECO:0007157 @@ -10306,6 +10586,7 @@ name: sandy soil exposure alt_id: EO:0007158 synonym: "sandy soil treatment (narrow)" NARROW [] is_a: PECO:0007155 ! soil type exposure +is_a: RO:0002310 [Term] id: PECO:0007159 @@ -10331,6 +10612,7 @@ def: "The treatment involving an exposure to wind with varying degree of tempera synonym: "air temperature treatment (narrow)" NARROW [] is_a: PECO:0007175 ! temperature environment exposure is_a: PECO:0007382 ! wind environment exposure +is_a: RO:0002310 [Term] id: PECO:0007162 @@ -10365,6 +10647,7 @@ synonym: "growth hormone treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:72 xref: PECO_GIT:71 is_a: PECO:0007189 ! chemical exposure +is_a: RO:0002310 [Term] id: PECO:0007166 @@ -10384,6 +10667,7 @@ xref: CHEBI:25944 xref: OBO_SF2_PECO:74 xref: PECO_GIT:73 is_a: PECO:0007189 ! chemical exposure +is_a: RO:0002310 [Term] id: PECO:0007168 @@ -10499,6 +10783,7 @@ def: "The treatment involving an exposure to a given amount of rainfall." [Grame synonym: "rainfall treatment (narrow)" NARROW [] is_a: PECO:0007064 ! ecological environment exposure is_a: PECO:0007198 ! water environment exposure +is_a: RO:0002310 [Term] id: PECO:0007182 @@ -10538,6 +10823,7 @@ xref: CHEBI:24866 xref: OBO_SF2_PECO:77 xref: PECO_GIT:76 is_a: PECO:0007189 ! chemical exposure +is_a: RO:0002310 [Term] id: PECO:0007186 @@ -11006,6 +11292,7 @@ def: "The treatment involving exposure of plant to elements that are required in synonym: "micronutrient treatment (narrow)" NARROW [] synonym: "trace element regimen (related)" RELATED [] is_a: PECO:0007241 ! plant nutrient exposure +is_a: RO:0002310 [Term] id: PECO:0007240 @@ -11068,6 +11355,7 @@ def: "A biotic plant exposure (PECO:0007357) involving exposure of a plant to ba synonym: "bacterial plant treatment (narrow)" NARROW [] synonym: "eubacteria (related)" RELATED [] is_a: PECO:0007357 ! biotic plant exposure +is_a: RO:0002310 [Term] id: PECO:0007247 @@ -11358,6 +11646,7 @@ alt_id: EO:0007278 def: "The treatment involving exposure of plant to oxygen to study various types of responses." [Gramene:pankaj_jaiswal] synonym: "oxygen treatment (narrow)" NARROW [] is_a: PECO:0007043 ! non-mineral nutrient exposure +is_a: RO:0002310 [Term] id: PECO:0007279 @@ -11717,6 +12006,7 @@ def: "The treatment involving exposure of plant to the rice yellow mottle virus. synonym: "rice yellow mottle virus treatment (narrow)" NARROW [] synonym: "RYMV (related)" RELATED [] is_a: PECO:0007109 ! ssRNA positive-strand virus with no DNA stage exposure +is_a: RO:0002310 [Term] id: PECO:0007319 @@ -12008,6 +12298,7 @@ def: "A biotic plant exposure (PECO:0007357) involving exposure of a plant to a synonym: "Animalia (related)" RELATED [] synonym: "metazoan plant treatment (narrow)" NARROW [] is_a: PECO:0007357 ! biotic plant exposure +is_a: RO:0002310 [Term] id: PECO:0007350 @@ -12017,6 +12308,7 @@ def: "The treatment involving exposure of plant to the rice stripe virus. It is synonym: "rice stripe virus treatment (narrow)" NARROW [] synonym: "RSV (related)" RELATED [] is_a: PECO:0007111 ! ssRNA negative-strand virus exposure +is_a: RO:0002310 [Term] id: PECO:0007351 @@ -12048,6 +12340,7 @@ synonym: "hoja blanca (related)" RELATED [] synonym: "rice hoja blanca tenuivirus (related)" RELATED [] synonym: "rice hoja blanca virus treatment (narrow)" NARROW [] is_a: PECO:0007111 ! ssRNA negative-strand virus exposure +is_a: RO:0002310 [Term] id: PECO:0007357 @@ -12067,6 +12360,7 @@ def: "The treatment involving exposure of plant to the rice grassy stunt virus. synonym: "RGSV (related)" RELATED [] synonym: "rice grassy stunt virus treatment (narrow)" NARROW [] is_a: PECO:0007111 ! ssRNA negative-strand virus exposure +is_a: RO:0002310 [Term] id: PECO:0007359 @@ -12087,6 +12381,7 @@ def: "The treatment involving exposure of plant to the barley yellow dwarf virus synonym: "barley yellow dwarf virus treatment (narrow)" NARROW [] synonym: "BYDV (related)" RELATED [] is_a: PECO:0007109 ! ssRNA positive-strand virus with no DNA stage exposure +is_a: RO:0002310 [Term] id: PECO:0007361 @@ -12408,6 +12703,7 @@ synonym: "deep water (related)" RELATED [] synonym: "flood prone region treatment (narrow)" NARROW [] synonym: "flooding (related)" RELATED [] is_a: PECO:0007064 ! ecological environment exposure +is_a: RO:0002310 [Term] id: PECO:0007397 @@ -12440,6 +12736,7 @@ alt_id: EO:0007400 def: "The treatment involving the plant or the populations grown in regions where the land is excessively dry and receives insufficient rainfall to support agriculture." [Gramene:pankaj_jaiswal] synonym: "arid region treatment (narrow)" NARROW [] is_a: PECO:0007394 ! desert like region exposure +is_a: RO:0002310 [Term] id: PECO:0007401 @@ -12501,6 +12798,7 @@ synonym: "methyl jasmonate treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:62 xref: PECO_GIT:62 is_a: PECO:0001003 ! organic chemical exposure +is_a: RO:0002310 [Term] id: PECO:0007408 @@ -12511,6 +12809,7 @@ synonym: "5-methyltryptophan treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:61 xref: PECO_GIT:61 is_a: PECO:0001003 ! organic chemical exposure +is_a: RO:0002310 [Term] id: PECO:0007409 @@ -12552,6 +12851,7 @@ alt_id: EO:0007412 def: "The treatment involving exposure of plant to micronutrient zinc by adding ZnSO4 as supplement to study various types of responses." [Gramene:pankaj_jaiswal] synonym: "zinc sulphate treatment (narrow)" NARROW [] synonym: "ZnSO4 (related)" RELATED [] +is_a: PECO:0007085 ! fertilizer exposure is_a: PECO:0007185 ! salt exposure is_a: PECO:0007309 ! zinc nutrient exposure @@ -12574,6 +12874,7 @@ synonym: "peroxide treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:73 xref: PECO_GIT:72 is_a: PECO:0007189 ! chemical exposure +is_a: RO:0002310 [Term] id: PECO:0007415 @@ -12604,6 +12905,7 @@ def: "The treatment involving use of 1,2-dichloroethane for mutagenesis process. synonym: "1,2-dichloroethane treatment (narrow)" NARROW [] synonym: "DCE (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007505 @@ -12612,6 +12914,7 @@ alt_id: EO:0007505 def: "The treatment involving use of 1,2:5,6-dibenzanthracene for mutagenesis process." [CAS:[53-70-3\], Gramene:pankaj_jaiswal] synonym: "1,2:5,6-dibenzanthracene treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007506 @@ -12621,6 +12924,7 @@ def: "The treatment involving use of 1,4-dimethanesulfonoxy-1:4-dimethylbutane f synonym: "1,4-dimethanesulfonoxy-1:4-dimethylbutane treatment (narrow)" NARROW [] synonym: "CB2348 (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007507 @@ -12630,6 +12934,7 @@ def: "The treatment involving use of 1,4-dimethanesulfonoxybut-2-yne for mutagen synonym: "1,4-dimethanesulfonoxybut-2-yne treatment (narrow)" NARROW [] synonym: "CB2058 (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007508 @@ -12650,6 +12955,7 @@ def: "The treatment involving use of 1,6-dimethylsulfonoxy D-mannitol for mutage synonym: "1,6-dimethylsulfonoxy D-mannitol treatment (narrow)" NARROW [] synonym: "CB2511 (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007510 @@ -12659,6 +12965,7 @@ def: "The treatment involving use of 1,6-dimethylsulfonoxy L-mannitol for mutage synonym: "1,6-dimethylsulfonoxy L-mannitol treatment (narrow)" NARROW [] synonym: "CB2628 (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007511 @@ -12667,6 +12974,7 @@ alt_id: EO:0007511 def: "The treatment involving use of 1-amino-2-naphthol-4-sulfonic acid for mutagenesis process." [CAS:[116-63-2\], Gramene:pankaj_jaiswal] synonym: "1-amino-2-naphthol-4-sulfonic acid treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007512 @@ -12676,6 +12984,7 @@ def: "The treatment involving use of 1-bromo-2-chloroethane for mutagenesis proc synonym: "1-bromo-2-chloroethane treatment (narrow)" NARROW [] synonym: "BCE (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007513 @@ -12684,6 +12993,7 @@ alt_id: EO:0007513 def: "The treatment involving use of 1-diethylaminoethylethylamino-4-methyl-thioxanthenone for mutagenesis process." [CAS:[479-50-5\], Gramene:pankaj_jaiswal] synonym: "1-diethylaminoethylethylamino-4-methyl-thioxanthenone treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007514 @@ -12692,6 +13002,7 @@ alt_id: EO:0007514 def: "The treatment involving use of 2,5,-bisethylene-imine-1,4-benzoquinone for mutagenesis process." [CAS:[526-62-5\], Gramene:pankaj_jaiswal] synonym: "2,5,-bisethylene-imine-1,4-benzoquinone treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007515 @@ -12701,6 +13012,7 @@ def: "The treatment involving use of 2-chloroethyl methanesulfonate for mutagene synonym: "2-chloroethyl methanesulfonate treatment (narrow)" NARROW [] synonym: "CB1506 (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007516 @@ -12710,6 +13022,7 @@ def: "The treatment involving use of 2-fluoroethyl methanesulfonate for mutagene synonym: "2-fluoroethyl methanesulfonate treatment (narrow)" NARROW [] synonym: "CB1522 (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007517 @@ -12718,6 +13031,7 @@ alt_id: EO:0007517 def: "The treatment involving use of 2-methoxyethanol for mutagenesis process." [CAS:[109-86-4\], Gramene:pankaj_jaiswal] synonym: "2-methoxyethanol treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007518 @@ -12726,6 +13040,7 @@ alt_id: EO:0007518 def: "The treatment involving use of 5-bromouracil for mutagenesis process." [CAS:[51-20-7\], Gramene:pankaj_jaiswal] synonym: "5-bromouracil treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007519 @@ -12734,6 +13049,7 @@ alt_id: EO:0007519 def: "The treatment involving use of 5-bromouridine for mutagenesis process." [CAS:[957-75-5\], Gramene:pankaj_jaiswal] synonym: "5-bromouridine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007520 @@ -12761,6 +13077,7 @@ alt_id: EO:0007522 def: "The treatment involving use of aminopterin for mutagenesis process." [CAS:[54-62-6\], Gramene:pankaj_jaiswal] synonym: "aminopterin treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007523 @@ -12777,6 +13094,7 @@ alt_id: EO:0007524 def: "The treatment involving use of caffeine for mutagenesis process." [CAS:[58-08-2\], Gramene:pankaj_jaiswal] synonym: "caffeine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007525 @@ -12786,6 +13104,7 @@ def: "The treatment involving use of cisplatin for mutagenesis process." [CAS:[1 synonym: "cis-dichlorodiammineplatinum(II) (related)" RELATED [] synonym: "cisplatin treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007526 @@ -12794,6 +13113,7 @@ alt_id: EO:0007526 def: "The treatment involving use of colchicine for mutagenesis process." [CAS:[64-86-8\], Gramene:pankaj_jaiswal] synonym: "colchicine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007527 @@ -12801,6 +13121,7 @@ name: cupric sulfate exposure alt_id: EO:0007527 def: "The treatment involving use of cupric sulfate for mutagenesis process." [CAS:[7758-98-7\], Gramene:pankaj_jaiswal] synonym: "cupric sulfate treatment (narrow)" NARROW [] +is_a: PECO:0007085 ! fertilizer exposure is_a: PECO:0007149 ! chemical mutagen exposure is_a: PECO:0007185 ! salt exposure @@ -12813,6 +13134,7 @@ synonym: "DEB (related)" RELATED [] synonym: "diepoxybutane treatment (narrow)" NARROW [] synonym: "erythritol anhydride (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007529 @@ -12830,6 +13152,7 @@ def: "The treatment involving use of diethyl sulfate for mutagenesis process." [ synonym: "DES (related)" RELATED [] synonym: "diethyl sulfate treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007531 @@ -12838,6 +13161,7 @@ alt_id: EO:0007531 def: "The treatment involving use of dimthyl sulfate for mutagenesis process." [CAS:[67-68-5\], Gramene:pankaj_jaiswal] synonym: "dimethyl sulfoxide treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007532 @@ -12846,6 +13170,7 @@ alt_id: EO:0007532 def: "The treatment involving use of DNA fragment insertion or deletion as part of mutagenesis." [CAS:[9007-49-2\], Gramene:pankaj_jaiswal] synonym: "DNA treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007533 @@ -12854,6 +13179,7 @@ alt_id: EO:0007533 def: "The treatment involving use of ethyl ether for mutagenesis process." [CAS:[60-29-7\], Gramene:pankaj_jaiswal] synonym: "ethyl ether treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007534 @@ -12865,6 +13191,7 @@ synonym: "EMS (related)" RELATED [] synonym: "ethyl methanesulfonate treatment (narrow)" NARROW [] synonym: "Methanesulfonic acid ethyl ester (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007535 @@ -12874,6 +13201,7 @@ def: "The treatment involving use of ethyl nitrosourea for mutagenesis process." synonym: "ENU (related)" RELATED [] synonym: "ethyl nitrosourea treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007536 @@ -12882,6 +13210,7 @@ alt_id: EO:0007536 def: "The treatment involving use of ethylene oxide for mutagenesis process." [Gramene:pankaj_jaiswal] synonym: "ethylene oxide treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007537 @@ -12891,6 +13220,7 @@ def: "The treatment involving use of ethylenimine for mutagenesis process." [CAS synonym: "EI (related)" RELATED [] synonym: "ethylenimine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007538 @@ -12899,6 +13229,7 @@ alt_id: EO:0007538 def: "The treatment involving use of fagaronine for mutagenesis process." [Gramene:pankaj_jaiswal] synonym: "fagaronine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007539 @@ -12917,6 +13248,7 @@ def: "The treatment involving use of boric acid for mutagenesis process." [Grame synonym: "boric acid treatment (narrow)" NARROW [] synonym: "H3BO3 (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007541 @@ -12935,6 +13267,7 @@ synonym: "altretamine (related)" RELATED [] synonym: "hexamethylmelamine treatment (narrow)" NARROW [] synonym: "HMM (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007543 @@ -12973,6 +13306,7 @@ def: "The treatment involving use of ICR 170 for mutagenesis process." [CAS:[146 synonym: "2-methoxy-6-dichloro-9-(3-ethyl-2-chloroethyl-aminopropylamino)acridine-dihydrochloride (related)" RELATED [] synonym: "ICR 170 treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007547 @@ -12981,6 +13315,7 @@ alt_id: EO:0007547 def: "The treatment involving use of iodine for mutagenesis process." [CAS:[7553-56-2\], Gramene:pankaj_jaiswal] synonym: "iodine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007548 @@ -12998,6 +13333,7 @@ alt_id: EO:0007549 def: "The treatment involving use of methoxy diethylnitrosamine for mutagenesis process." [Gramene:pankaj_jaiswal] synonym: "methoxy diethylnitrosamine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007550 @@ -13008,6 +13344,7 @@ synonym: "CB1540 (related)" RELATED [] synonym: "methyl methanesulfonate treatment (narrow)" NARROW [] synonym: "MMS (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007551 @@ -13028,6 +13365,7 @@ def: "The treatment involving use of mustard gas for mutagenesis process." [CAS: synonym: "1,1'-thiobis[2-chloroethane (related)" RELATED [] synonym: "mustard gas treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007553 @@ -13038,6 +13376,7 @@ synonym: "MNNG (related)" RELATED [] synonym: "N-methyl-N'-nitro-N-nitrosoguanidine treatment (narrow)" NARROW [] synonym: "NNG (related)" RELATED [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007554 @@ -13047,6 +13386,7 @@ def: "The treatment involving use of N-nitrosodimethylamine for mutagenesis proc synonym: "DMN (related)" RELATED [] synonym: "N-nitrosodimethylamine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007555 @@ -13055,6 +13395,7 @@ alt_id: EO:0007555 def: "The treatment involving use of natural gas for mutagenesis process." [Gramene:pankaj_jaiswal] synonym: "natural gas treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007556 @@ -13067,6 +13408,7 @@ synonym: "HN2 (related)" RELATED [] synonym: "mechlorethamine (related)" RELATED [] synonym: "nitrogen mustard treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007557 @@ -13077,6 +13419,7 @@ synonym: "MNU (related)" RELATED [] synonym: "N-methyl-N-nitrosourea (related)" RELATED [] synonym: "nitrosomethyl urea treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007558 @@ -13086,6 +13429,7 @@ def: "The treatment involving use of p-N,N-di(2-chloroethyl)aminophenylvaleric a synonym: "CB1356 (related)" RELATED [] synonym: "p-N,N-di(2-chloroethyl)aminophenylvaleric acid treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007559 @@ -13095,6 +13439,7 @@ def: "The treatment involving use of p-N,N-di-(2-chloroethyl)amino-D-phenylalani synonym: "CB3026 (related)" RELATED [] synonym: "p-N,N-di-(2-chloroethyl)amino-D-phenylalanine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007560 @@ -13114,6 +13459,7 @@ def: "The treatment involving use of p-N,N-di-(2-chloroethyl)amino-L-phenylalani synonym: "CB3025 (related)" RELATED [] synonym: "p-N,N-di-(2-chloroethyl)amino-L-phenylalanine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007562 @@ -13133,6 +13479,7 @@ def: "The treatment involving use of p-N,N-di-(2-chloroethyl)aminophenylethylami synonym: "CB3034 (related)" RELATED [] synonym: "p-N,N-di-(2-chloroethyl)aminophenylethylamine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007564 @@ -13142,6 +13489,7 @@ def: "The treatment involving use of p-p'-N,N-di(2-chloroethyl)aminophenoxypheny synonym: "CB3051 (related)" RELATED [] synonym: "p-p'-N,N-di(2-chloroethyl)aminophenoxyphenylalanine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007565 @@ -13150,6 +13498,7 @@ alt_id: EO:0007565 def: "The treatment involving use of quinhydrone for mutagenesis process." [CAS:[106-34-3\], Gramene:pankaj_jaiswal] synonym: "quinhydrone treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007566 @@ -13159,6 +13508,7 @@ def: "The treatment involving use of S-2-chloroethylcysteine for mutagenesis pro synonym: "CB1592 (related)" RELATED [] synonym: "S-2-chloroethylcysteine treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007567 @@ -13186,6 +13536,7 @@ def: "The treatment involving use of styryl quinoline for mutagenesis process." synonym: "CB3086 (related)" RELATED [] synonym: "styryl quinoline treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007570 @@ -13195,6 +13546,7 @@ def: "The treatment involving use of sulfur mustard for mutagenesis process." [C synonym: "CB1735 (related)" RELATED [] synonym: "sulfur mustard treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007571 @@ -13203,6 +13555,7 @@ alt_id: EO:0007571 def: "The treatment involving use of triaziquone for mutagenesis process." [CAS:[68-76-8\], Gramene:pankaj_jaiswal] synonym: "triaziquone treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007572 @@ -13222,6 +13575,7 @@ alt_id: EO:0007573 def: "The treatment involving use of urethane for mutagenesis process." [CAS:[51-79-6\], Gramene:pankaj_jaiswal] synonym: "urethane treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007574 @@ -13230,6 +13584,7 @@ alt_id: EO:0007574 def: "The treatment involving use of vinyl carbamate for mutagenesis process." [CAS:[15805-73-9\], Gramene:pankaj_jaiswal] synonym: "vinyl carbamate treatment (narrow)" NARROW [] is_a: PECO:0007149 ! chemical mutagen exposure +is_a: RO:0002310 [Term] id: PECO:0007610 @@ -13367,6 +13722,7 @@ alt_id: EO:0007629 def: "An exposure involving exposure of plant to molecular or ionic forms of hydrogen to study various types of responses." [Gramene:pankaj_jaiswal] synonym: "hydrogen treatment (narrow)" NARROW [] is_a: PECO:0007043 ! non-mineral nutrient exposure +is_a: RO:0002310 [Term] id: PECO:0007630 @@ -13399,7 +13755,7 @@ is_a: PECO:0007167 ! pesticide exposure id: PECO:0007633 name: imidazolinone exposure alt_id: EO:0007633 -def: "An herbicide exposure (PECO:0007183) involving the use of an imidazolinone herbicide." [TO:moorel, web:http\://corn.agronomy.wisc.edu/AAdvice/1994/A001.html] +def: "An herbicide exposure (PECO:0007183) involving the use of an imidazolinone herbicide." [TO:moorel] comment: This type of herbicides are taken up by plant root and leaf tissue and transported to the meristems via both phloem and xylem. The herbicide stops the activity of the enzyme, acetolactate synthase (ALS), which is involved in branch chain amino acid (valine, leucine and isoleucine) synthesis. synonym: "imidazolinone treatment (narrow)" NARROW [] xref: OBO_SF2_PECO:75 @@ -13414,6 +13770,10 @@ def: "The treatment involving exposure of plant to the pest commonly calles as c synonym: "Spodoptera litura treatment (narrow)" NARROW [] is_a: PECO:0007115 ! Spodoptera spp. exposure +[Term] +id: RO:0002310 +is_a: BFO:0000015 + [Term] id: RO:0002577 is_a: BFO:0000040 diff --git a/peco.owl b/peco.owl index 623a83c..ad79f8e 100644 --- a/peco.owl +++ b/peco.owl @@ -1,27 +1,27 @@ + xmlns:swrla="http://swrl.stanford.edu/ontologies/3.3/swrla.owl#" + xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - - - - + - - + - plant_experimental_conditions_ontology + + + + 12:10:2015 15:21 + plant_experimental_conditions_ontology 1.2 cooperl @@ -249,14 +249,6 @@ - - - - - - - - @@ -273,14 +265,6 @@ - - - - - - - - @@ -289,14 +273,6 @@ - - - - - - - - @@ -329,30 +305,6 @@ - - - - - - - - - - - - - - - - - - - - - - - - @@ -415,6 +367,22 @@ + + + + + + + + + + + + + + + + @@ -558,6 +526,14 @@ + + + + + + + + @@ -657,6 +633,63 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -665,6 +698,22 @@ + + + + + + + + + + + + + + + + @@ -685,6 +734,7 @@ + @@ -746,6 +796,15 @@ + + + + + + + + + @@ -939,6 +998,16 @@ + + + + + + + + + + @@ -998,7 +1067,6 @@ - @@ -1354,6 +1422,15 @@ + + + + + + + + + @@ -1470,6 +1547,7 @@ + @@ -1678,6 +1756,14 @@ + + + + + + + + @@ -1978,6 +2064,7 @@ + @@ -2722,7 +2809,7 @@ - + @@ -2738,7 +2825,7 @@ - + @@ -4355,7 +4442,7 @@ - + @@ -4588,6 +4675,7 @@ + @@ -4720,6 +4808,7 @@ + @@ -4829,7 +4918,6 @@ - @@ -5128,6 +5216,14 @@ + + + + + + + + @@ -5475,6 +5571,14 @@ + + + + + + + + @@ -5747,7 +5851,6 @@ - @@ -7194,6 +7297,14 @@ + + + + + + + + @@ -7918,6 +8029,24 @@ + + + + + + + + + + + + + + + + + + @@ -8079,6 +8208,23 @@ + + + + + + + + + + + + + + + + + @@ -8307,17 +8453,8 @@ + - - - - - - - - - - @@ -8442,7 +8579,6 @@ - @@ -8511,8 +8647,8 @@ + - @@ -8520,8 +8656,8 @@ + - @@ -8677,7 +8813,7 @@ - + @@ -8783,6 +8919,14 @@ + + + + + + + + @@ -10240,7 +10384,7 @@ - + @@ -10339,6 +10483,7 @@ + @@ -10356,7 +10501,6 @@ - @@ -10488,7 +10632,7 @@ - + @@ -10944,6 +11088,14 @@ + + + + + + + + @@ -10993,6 +11145,14 @@ + + + + + + + + @@ -11017,6 +11177,14 @@ + + + + + + + + @@ -11041,6 +11209,14 @@ + + + + + + + + @@ -11087,7 +11263,6 @@ - @@ -11181,7 +11356,6 @@ - @@ -12397,6 +12571,14 @@ + + + + + + + + @@ -12742,43 +12924,42 @@ - + - - + + - + - - + + - + - - + + - + - - + + - + - - - + + @@ -12815,15 +12996,6 @@ - - - - - - - - - @@ -12840,26 +13012,27 @@ - + - - + + + - + - + - + - - + + @@ -12891,23 +13064,7 @@ - - - - - - - - - - - - - - - - - + @@ -12979,7 +13136,7 @@ - + @@ -12995,7 +13152,7 @@ - + @@ -13020,7 +13177,8 @@ - + + @@ -13028,7 +13186,7 @@ - + @@ -13049,6 +13207,22 @@ + + + + + + + + + + + + + + + + @@ -13061,6 +13235,7 @@ + @@ -13069,7 +13244,7 @@ - + @@ -13077,12 +13252,44 @@ - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -13094,7 +13301,7 @@ - + @@ -13118,7 +13325,15 @@ - + + + + + + + + + @@ -13143,7 +13358,6 @@ - @@ -13152,7 +13366,6 @@ - @@ -13160,7 +13373,7 @@ - + @@ -13168,7 +13381,7 @@ - + @@ -13176,8 +13389,8 @@ - - + + @@ -13185,7 +13398,16 @@ - + + + + + + + + + + @@ -13217,7 +13439,7 @@ - + @@ -13249,7 +13471,7 @@ - + @@ -13288,14 +13510,6 @@ - - - - - - - - @@ -13304,14 +13518,6 @@ - - - - - - - - @@ -13320,15 +13526,6 @@ - - - - - - - - - @@ -13340,7 +13537,7 @@ - + @@ -13364,41 +13561,220 @@ - + - + - - + + + - + - - - + + - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - + - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -13414,23 +13790,23 @@ - + - + - - + + - + - - + + @@ -13438,20 +13814,11 @@ - - - - - - - - - @@ -13476,6 +13843,15 @@ + + + + + + + + + @@ -13542,6 +13918,22 @@ + + + + + + + + + + + + + + + + @@ -19856,74 +20248,58 @@ - - - - - - - - - + - - - - - - - - - - + + - + - - + + - + - - + + - + - + - + - - + + - + - - + + - + - - + + @@ -19987,7 +20363,7 @@ - + @@ -20123,7 +20499,7 @@ - + @@ -20280,14 +20656,6 @@ - - - - - - - - @@ -20352,18 +20720,10 @@ - - - - - - - - - + @@ -20507,7 +20867,7 @@ - + @@ -20563,7 +20923,7 @@ - + @@ -20592,6 +20952,54 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -20608,6 +21016,22 @@ + + + + + + + + + + + + + + + + @@ -20635,7 +21059,7 @@ - + @@ -20899,7 +21323,7 @@ - + @@ -20960,26 +21384,10 @@ - - - - - - - - - - - - - - - - - + @@ -21144,14 +21552,6 @@ - - - - - - - - @@ -21227,7 +21627,7 @@ - + @@ -21344,6 +21744,14 @@ + + + + + + + + @@ -21552,6 +21960,14 @@ + + + + + + + + @@ -21563,7 +21979,7 @@ - + @@ -21600,22 +22016,6 @@ - - - - - - - - - - - - - - - - @@ -21979,7 +22379,7 @@ - + @@ -22019,7 +22419,6 @@ - @@ -22053,7 +22452,6 @@ - @@ -22067,18 +22465,10 @@ - - - - - - - - - + @@ -22099,18 +22489,27 @@ - + - + + - + - - + + + + + + + + + + @@ -22118,7 +22517,6 @@ - @@ -22127,7 +22525,6 @@ - @@ -22136,7 +22533,6 @@ - @@ -22200,10 +22596,17 @@ + + + + + + + + - @@ -22220,7 +22623,6 @@ - @@ -22234,14 +22636,6 @@ - - - - - - - - @@ -22253,7 +22647,7 @@ - + @@ -22459,6 +22853,7 @@ + An inorganic chemical exposure (PECO:0001004) involving the application of an anion or a mixture of anions (CHEBI:22563). cooperl 2013-04-11T12:29:25Z @@ -22485,7 +22880,8 @@ - An organic chemical exposure (PECO:0001003) involving the application of a carbohydrate (CHEBI:16646) or mixture of carbohydratePECO:cooperl:16646, PECO:cooperl] + + An organic chemical exposure (PECO:0001003) involving the application of a carbohydrate (CHEBI:16646) or mixture of carbohydrates. moorel 2013-04-11T13:43:22Z EO:0001010 @@ -22497,6 +22893,12 @@ Carbohydrate (CHEBI:16646) is defined as the generic term 'carbohydrate' includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. carbohydrate exposure + + + + An organic chemical exposure (PECO:0001003) involving the application of a carbohydrate (CHEBI:16646) or mixture of carbohydrates. + PECO:cooperl + @@ -22633,6 +23035,7 @@ + An inorganic chemical exposure (PECO:0001004) involving the application of a cation (CHEBI:36916) or mixture of cations . cooperl 2013-04-12T11:42:16Z @@ -22729,6 +23132,7 @@ + An inorganic gas exposure (PECO:0001055) that involves the application of carbon dioxide (CHEBI:16526). cooperl 2013-04-12T12:41:25Z @@ -23057,7 +23461,7 @@ parasitic wasp insect plant treatment (narrow) plant_experimental_conditions_ontology PECO:0001033 - Parasitic wasp (or parasitoid wasp) refers to a large evolutionary grade of hymenopteran superfamilies, mainly in the Apocrita (from wikipedia). + Parasitic wasp (or parasitoid wasp) refers to a large evolutionary grade of hymenopteran superfamilies, mainly in the Apocrita. parasitic wasp insect plant exposure @@ -23066,6 +23470,12 @@ A Hymenoptera insect plant exposure (PECO:0001032) that involves exposure to parasitic wasps. PECO:cooperl + + + + Parasitic wasp (or parasitoid wasp) refers to a large evolutionary grade of hymenopteran superfamilies, mainly in the Apocrita. + Wikipedia:Parasitoid_wasp + @@ -23744,6 +24154,7 @@ + An organic chemical exposure (PECO:0001003) involving the application of polyethylene glycol (CHEBI:46793). cooperl 2014-06-04T10:14:09Z @@ -23811,6 +24222,160 @@ + + + + + A chemical fertilizer exposure (PECO:0007086) involving the use of potassium fertilizer as a supplement to study plant responses. + Laurel_Cooper + 2018-10-18T17:40:45Z + PECO_GIT:112 + plant_experimental_conditions_ontology + PECO:0001064 + potassium fertilizer exposure + + + + + A chemical fertilizer exposure (PECO:0007086) involving the use of potassium fertilizer as a supplement to study plant responses. + PECO:cooperl + + + + + + + + + A potassium fertilizer exposure (PECO:0001064) involving the use of potassium chloride fertilizer as a supplement to study plant responses. + Laurel_Cooper + 2018-10-18T17:51:54Z + PECO_GIT:112 + plant_experimental_conditions_ontology + muriate of potash exposure (related) + PECO:0001065 + potassium chloride exposure + + + + + A potassium fertilizer exposure (PECO:0001064) involving the use of potassium chloride fertilizer as a supplement to study plant responses. + PECO:cooperl + + + + + + + + + A pesticide exposure (PECO:0007167) involving the application of a nematicide; a chemical entity or mixture of chemical entities to kill plant-parasitic nematodes. + Laurel_Cooper + 2018-10-18T18:51:16Z + PECO_GIT:113 + plant_experimental_conditions_ontology + PECO:0001066 + nematicide exposure + + + + + + + + + A natural fertilizer exposure (PECO:0007087) which is the application of castor meal. + cooperl + 2019-03-22T18:57:37Z + PECO_GIT:115 + castor meal treatment (exact) + plant_experimental_conditions_ontology + PECO:0001067 + Castor meal is a by-product of castor oil production from seeds of the Castor (Ricinus communis) plant and has a high nitrogen content. + castor meal exposure + + + + + A natural fertilizer exposure (PECO:0007087) which is the application of castor meal. + PECO:cooperl + + + + + + + + + A natural fertilizer exposure (PECO:0007087) which is the application of rapeseed meal. + cooperl + 2019-03-22T20:43:53Z + PECO_GIT:117 + rape cake exposure (narrow) + rapeseed cake exposure (narrow) + plant_experimental_conditions_ontology + PECO:0001068 + Rapeseed meal is a by-product of rapeseed oil production from seeds of the Rapeseed (Brassica napus L.) plant and has a high protein content. + rapeseed meal exposure + + + + + + + + + A natural fertilizer exposure (PECO:0007087) which is the application of a green manure. + cooperl + 2019-03-22T21:10:04Z + PECO_GIT:116 + plant_experimental_conditions_ontology + PECO:0001069 + Green manure is created by leaving uprooted or sown crop parts to wither on a field so that they serve as a mulch and soil amendment. The plants used for green manure are often cover crops grown primarily for this purpose. + green manure exposure + + + + + A natural fertilizer exposure (PECO:0007087) which is the application of a green manure. + PECO:cooperl + + + + + Green manure is created by leaving uprooted or sown crop parts to wither on a field so that they serve as a mulch and soil amendment. The plants used for green manure are often cover crops grown primarily for this purpose. + Wikipedia:Green_manure + + + + + + + + + + + + + + + A salt exposure (PECO:0007185) which is a treatment with calcium carbonate (CHEBI:3311) in order to raise the pH of the growing media. + cooperl + 2019-09-20T22:36:52Z + lime exposure (broad) + plant_experimental_conditions_ontology + PECO:0001070 + calcium carbonate exposure + + + + + A salt exposure (PECO:0007185) which is a treatment with calcium carbonate (CHEBI:3311) in order to raise the pH of the growing media. + PECO:cooperl + + + + @@ -24256,6 +24821,7 @@ + An exposure of a reference or experimental plant to monocot plants found in its growth environment. These plants may be growing as a weed or as part of normal farming practices. EO:0007022 Liliopsida treatment (narrow) @@ -24634,6 +25200,7 @@ + A chemical exposure (PECO:0007189) involving the use of antibiotic for selection purposes. EO:0007041 OBO_SF2_PECO:70 @@ -24677,6 +25244,7 @@ + An inorganic chemical exposure (PECO:0001004) involving the application of a mineral or a combination of minerals. EO:0007044 OBO_SF2_PECO:52 @@ -25304,6 +25872,7 @@ + A fungal plant exposure (PECO:0007233) involving the exposure of plant to the pathogen belonging to Basidiomycetes class. EO:0007073 NCBI_Taxon_ID:5204 @@ -25530,6 +26099,7 @@ + A plant nutrient exposure (PECO:0007241) involving the use of a fertilizer, a combination of plant nutrients. EO:0007085 fertilizer treatment (narrow) @@ -25615,6 +26185,7 @@ + A natural fertilizer exposure (PECO:0007087) which is the application of bone meal. EO:0007089 bone meal treatment (narrow) plant_experimental_conditions_ontology @@ -25649,6 +26220,7 @@ + A natural fertilizer exposure (PECO:0007087) which is the application of seaweed extract. EO:0007091 seaweed extract treatment (narrow) plant_experimental_conditions_ontology @@ -25662,6 +26234,7 @@ + A natural fertilizer exposure (PECO:0007087) which is the application of wood ash. EO:0007092 wood ash treatment (narrow) plant_experimental_conditions_ontology @@ -25675,6 +26248,7 @@ + A natural fertilizer exposure (PECO:0007087) which is the application of fish meal. EO:0007093 fish meal treatment (narrow) plant_experimental_conditions_ontology @@ -25939,6 +26513,7 @@ + Treatment involving the exposure of plant to the Stramenopiles (heterokonts) present in the growth environment. EO:0007106 Stramenopiles treatment (narrow) @@ -25962,6 +26537,7 @@ + A fungal plant exposure (PECO:0007233) involving the exposure of plant to the pathogen belonging to Ascomycetes class. EO:0007107 NCBI_Taxon_ID:4890 @@ -26028,6 +26604,7 @@ + Treatment involving the exposure of plant to the pathogenic double stranded RNA virus. EO:0007110 dsRNA virus treatment (narrow) @@ -26905,13 +27482,14 @@ + A physical plant exposure (PECO:0007316) involving an exposure with a radiation type, intensity or quantity. EO:0007151 radiation treatment (narrow) plant_experimental_conditions_ontology light regimen (related) PECO:0007151 - EMR is classified according to the frequency of its wave. The electromagnetic spectrum, in order of increasing frequency and decreasing wavelength, consists of radio waves, microwaves, infrared radiation, visible light, ultraviolet radiation, X-rays and gamma rays. (from Wikipedia). + Electromagnetic radiation is classified according to the frequency of its waves. The electromagnetic spectrum, in order of increasing frequency and decreasing wavelength, consists of radio waves, microwaves, infrared radiation, visible light, ultraviolet radiation, X-rays and gamma rays. radiation exposure @@ -26921,6 +27499,12 @@ Gramene:pankaj_jaiswal PECO:cooperl + + + + Electromagnetic radiation is classified according to the frequency of its waves. The electromagnetic spectrum, in order of increasing frequency and decreasing wavelength, consists of radio waves, microwaves, infrared radiation, visible light, ultraviolet radiation, X-rays and gamma rays. + Wikipedia:Electromagnetic_radiation + @@ -27008,6 +27592,7 @@ + EO:0007156 clay soil treatment (narrow) plant_experimental_conditions_ontology @@ -27034,6 +27619,7 @@ + EO:0007158 sandy soil treatment (narrow) plant_experimental_conditions_ontology @@ -27082,6 +27668,7 @@ + The treatment involving an exposure to wind with varying degree of temperature, which may depend on the study type or the regional environment. EO:0007161 air temperature treatment (narrow) @@ -27162,6 +27749,7 @@ + A chemical exposure (PECO:0007189) involving the application of one or more plant growth hormones. EO:0007165 OBO_SF2_PECO:72 @@ -27205,6 +27793,7 @@ + A chemical exposure (PECO:0007189) involving the application of a pesticide; a chemical entity or mixture of chemical entities. EO:0007167 CHEBI:25944 @@ -27525,6 +28114,7 @@ + The treatment involving an exposure to a given amount of rainfall. EO:0007181 rainfall treatment (narrow) @@ -27610,6 +28200,7 @@ + A chemical exposure (PECO:0007189) involving use of salts as supplement to liquid and soil growth media to study various types of responses on their application. EO:0007185 CHEBI:24866 @@ -28729,6 +29320,7 @@ + The treatment involving exposure of plant to elements that are required in tiny quantities for growth, as supplement to study various types of responses. EO:0007239 micronutrient treatment (narrow) @@ -28879,6 +29471,7 @@ + A biotic plant exposure (PECO:0007357) involving exposure of a plant to bacteria. EO:0007246 bacterial plant treatment (narrow) @@ -29558,6 +30151,7 @@ + The treatment involving exposure of plant to oxygen to study various types of responses. EO:0007278 oxygen treatment (narrow) @@ -30383,6 +30977,7 @@ + The treatment involving exposure of plant to the rice yellow mottle virus. It is a causal agent for rice yellow mottle disease. EO:0007318 rice yellow mottle virus treatment (narrow) @@ -31062,6 +31657,7 @@ + A biotic plant exposure (PECO:0007357) involving exposure of a plant to a metazoan organism (animal). EO:0007349 metazoan plant treatment (narrow) @@ -31085,6 +31681,7 @@ + The treatment involving exposure of plant to the rice stripe virus. It is a causal agent for rice stripe disease. EO:0007350 rice stripe virus treatment (narrow) @@ -31167,6 +31764,7 @@ + The treatment involving exposure of plant to the rice hoja blanca virus. It is a causal agent for rice hoja blanca disease. EO:0007356 rice hoja blanca virus treatment (narrow) @@ -31213,6 +31811,7 @@ + The treatment involving exposure of plant to the rice grassy stunt virus. It is a causal agent for rice grassy stunt disease. EO:0007358 rice grassy stunt virus treatment (narrow) @@ -31260,6 +31859,7 @@ + The treatment involving exposure of plant to the barley yellow dwarf virus. It is a causal agent for rice Giallume disease. EO:0007360 barley yellow dwarf virus treatment (narrow) @@ -32005,6 +32605,7 @@ + A treatment in terms of plant's exposure to the regional conditions found in the vicinity of the water bodies like, sea, river, lake etc. Growth conditions may include aerobic to anaerobic soil, salinity or toxicity in tidal areas. Treatment may include standing or flash flooding. EO:0007396 flood prone region treatment (narrow) @@ -32087,6 +32688,7 @@ + The treatment involving the plant or the populations grown in regions where the land is excessively dry and receives insufficient rainfall to support agriculture. EO:0007400 arid region treatment (narrow) @@ -32212,6 +32814,7 @@ + An organic chemical exposure (PECO:0001003) involving the application of methyl jasmonate (MeJa; CHEBI:15929). EO:0007407 OBO_SF2_PECO:62 @@ -32235,6 +32838,7 @@ + An organic chemical exposure (PECO:0001003) involving the application of the tryptophan (Trp) analog 5-methyltryptophan (5MT; CHEBI: 52446). EO:0007408 OBO_SF2_PECO:61 @@ -32327,6 +32931,7 @@ + The treatment involving exposure of plant to micronutrient zinc by adding ZnSO4 as supplement to study various types of responses. @@ -32372,6 +32977,7 @@ + A chemical exposure (PECO:0007189) involving exposure of plant to a peroxide to study various types of oxidative stress responses. EO:0007414 OBO_SF2_PECO:73 @@ -32440,6 +33046,7 @@ + The treatment involving use of 1,2-dichloroethane for mutagenesis process. EO:0007504 1,2-dichloroethane treatment (narrow) @@ -32462,6 +33069,7 @@ + The treatment involving use of 1,2:5,6-dibenzanthracene for mutagenesis process. EO:0007505 1,2:5,6-dibenzanthracene treatment (narrow) @@ -32483,6 +33091,7 @@ + The treatment involving use of 1,4-dimethanesulfonoxy-1:4-dimethylbutane for mutagenesis process. EO:0007506 1,4-dimethanesulfonoxy-1:4-dimethylbutane treatment (narrow) @@ -32505,6 +33114,7 @@ + The treatment involving use of 1,4-dimethanesulfonoxybut-2-yne for mutagenesis process. EO:0007507 1,4-dimethanesulfonoxybut-2-yne treatment (narrow) @@ -32551,6 +33161,7 @@ + The treatment involving use of 1,6-dimethylsulfonoxy D-mannitol for mutagenesis process. EO:0007509 1,6-dimethylsulfonoxy D-mannitol treatment (narrow) @@ -32573,6 +33184,7 @@ + The treatment involving use of 1,6-dimethylsulfonoxy L-mannitol for mutagenesis process. EO:0007510 1,6-dimethylsulfonoxy L-mannitol treatment (narrow) @@ -32595,6 +33207,7 @@ + The treatment involving use of 1-amino-2-naphthol-4-sulfonic acid for mutagenesis process. EO:0007511 1-amino-2-naphthol-4-sulfonic acid treatment (narrow) @@ -32616,6 +33229,7 @@ + The treatment involving use of 1-bromo-2-chloroethane for mutagenesis process. EO:0007512 1-bromo-2-chloroethane treatment (narrow) @@ -32638,6 +33252,7 @@ + The treatment involving use of 1-diethylaminoethylethylamino-4-methyl-thioxanthenone for mutagenesis process. EO:0007513 1-diethylaminoethylethylamino-4-methyl-thioxanthenone treatment (narrow) @@ -32659,6 +33274,7 @@ + The treatment involving use of 2,5,-bisethylene-imine-1,4-benzoquinone for mutagenesis process. EO:0007514 2,5,-bisethylene-imine-1,4-benzoquinone treatment (narrow) @@ -32680,6 +33296,7 @@ + The treatment involving use of 2-chloroethyl methanesulfonate for mutagenesis process. EO:0007515 2-chloroethyl methanesulfonate treatment (narrow) @@ -32702,6 +33319,7 @@ + The treatment involving use of 2-fluoroethyl methanesulfonate for mutagenesis process. EO:0007516 2-fluoroethyl methanesulfonate treatment (narrow) @@ -32724,6 +33342,7 @@ + The treatment involving use of 2-methoxyethanol for mutagenesis process. EO:0007517 2-methoxyethanol treatment (narrow) @@ -32745,6 +33364,7 @@ + The treatment involving use of 5-bromouracil for mutagenesis process. EO:0007518 5-bromouracil treatment (narrow) @@ -32766,6 +33386,7 @@ + The treatment involving use of 5-bromouridine for mutagenesis process. EO:0007519 5-bromouridine treatment (narrow) @@ -32833,6 +33454,7 @@ + The treatment involving use of aminopterin for mutagenesis process. EO:0007522 aminopterin treatment (narrow) @@ -32875,6 +33497,7 @@ + The treatment involving use of caffeine for mutagenesis process. EO:0007524 caffeine treatment (narrow) @@ -32896,6 +33519,7 @@ + The treatment involving use of cisplatin for mutagenesis process. EO:0007525 cisplatin treatment (narrow) @@ -32918,6 +33542,7 @@ + The treatment involving use of colchicine for mutagenesis process. EO:0007526 colchicine treatment (narrow) @@ -32938,6 +33563,7 @@ + The treatment involving use of cupric sulfate for mutagenesis process. @@ -32961,6 +33587,7 @@ + The treatment involving use of diepoxybutane for mutagenesis process. EO:0007528 diepoxybutane treatment (narrow) @@ -33005,6 +33632,7 @@ + The treatment involving use of diethyl sulfate for mutagenesis process. EO:0007530 diethyl sulfate treatment (narrow) @@ -33027,6 +33655,7 @@ + The treatment involving use of dimthyl sulfate for mutagenesis process. EO:0007531 dimethyl sulfoxide treatment (narrow) @@ -33048,6 +33677,7 @@ + The treatment involving use of DNA fragment insertion or deletion as part of mutagenesis. EO:0007532 DNA treatment (narrow) @@ -33069,6 +33699,7 @@ + The treatment involving use of ethyl ether for mutagenesis process. EO:0007533 ethyl ether treatment (narrow) @@ -33090,6 +33721,7 @@ + The treatment involving use of EMS as a mutagen by damaging DNA and is used experimentally for that effect. EO:0007534 ethyl methanesulfonate treatment (narrow) @@ -33114,6 +33746,7 @@ + The treatment involving use of ethyl nitrosourea for mutagenesis process. EO:0007535 ethyl nitrosourea treatment (narrow) @@ -33136,6 +33769,7 @@ + The treatment involving use of ethylene oxide for mutagenesis process. EO:0007536 ethylene oxide treatment (narrow) @@ -33156,6 +33790,7 @@ + The treatment involving use of ethylenimine for mutagenesis process. EO:0007537 ethylenimine treatment (narrow) @@ -33178,6 +33813,7 @@ + The treatment involving use of fagaronine for mutagenesis process. EO:0007538 fagaronine treatment (narrow) @@ -33220,6 +33856,7 @@ + The treatment involving use of boric acid for mutagenesis process. EO:0007540 boric acid treatment (narrow) @@ -33262,6 +33899,7 @@ + The treatment involving use of hexamethylmelamine for mutagenesis process. EO:0007542 hexamethylmelamine treatment (narrow) @@ -33353,6 +33991,7 @@ + The treatment involving use of ICR 170 for mutagenesis process. EO:0007546 ICR 170 treatment (narrow) @@ -33375,6 +34014,7 @@ + The treatment involving use of iodine for mutagenesis process. EO:0007547 iodine treatment (narrow) @@ -33418,6 +34058,7 @@ + The treatment involving use of methoxy diethylnitrosamine for mutagenesis process. EO:0007549 methoxy diethylnitrosamine treatment (narrow) @@ -33438,6 +34079,7 @@ + The treatment involving use of methyl methanesulfonate for mutagenesis process. EO:0007550 methyl methanesulfonate treatment (narrow) @@ -33486,6 +34128,7 @@ + The treatment involving use of mustard gas for mutagenesis process. EO:0007552 mustard gas treatment (narrow) @@ -33508,6 +34151,7 @@ + The treatment involving use of N-methyl-N'-nitro-N-nitrosoguanidine for mutagenesis process. EO:0007553 N-methyl-N'-nitro-N-nitrosoguanidine treatment (narrow) @@ -33531,6 +34175,7 @@ + The treatment involving use of N-nitrosodimethylamine for mutagenesis process. EO:0007554 N-nitrosodimethylamine treatment (narrow) @@ -33553,6 +34198,7 @@ + The treatment involving use of natural gas for mutagenesis process. EO:0007555 natural gas treatment (narrow) @@ -33573,6 +34219,7 @@ + The treatment involving use of nitrogen mustard for mutagenesis process. EO:0007556 nitrogen mustard treatment (narrow) @@ -33598,6 +34245,7 @@ + The treatment involving use of nitrosomethyl urea for mutagenesis process. EO:0007557 nitrosomethyl urea treatment (narrow) @@ -33621,6 +34269,7 @@ + The treatment involving use of p-N,N-di(2-chloroethyl)aminophenylvaleric acid for mutagenesis process. EO:0007558 p-N,N-di(2-chloroethyl)aminophenylvaleric acid treatment (narrow) @@ -33643,6 +34292,7 @@ + The treatment involving use of p-N,N-di-(2-chloroethyl)amino-D-phenylalanine for mutagenesis process. EO:0007559 p-N,N-di-(2-chloroethyl)amino-D-phenylalanine treatment (narrow) @@ -33688,6 +34338,7 @@ + The treatment involving use of p-N,N-di-(2-chloroethyl)amino-L-phenylalanine for mutagenesis process. EO:0007561 p-N,N-di-(2-chloroethyl)amino-L-phenylalanine treatment (narrow) @@ -33732,6 +34383,7 @@ + The treatment involving use of p-N,N-di-(2-chloroethyl)aminophenylethylamine for mutagenesis process. EO:0007563 p-N,N-di-(2-chloroethyl)aminophenylethylamine treatment (narrow) @@ -33754,6 +34406,7 @@ + The treatment involving use of p-p'-N,N-di(2-chloroethyl)aminophenoxyphenylalanine for mutagenesis process. EO:0007564 p-p'-N,N-di(2-chloroethyl)aminophenoxyphenylalanine treatment (narrow) @@ -33776,6 +34429,7 @@ + The treatment involving use of quinhydrone for mutagenesis process. EO:0007565 quinhydrone treatment (narrow) @@ -33797,6 +34451,7 @@ + The treatment involving use of S-2-chloroethylcysteine for mutagenesis process. EO:0007566 S-2-chloroethylcysteine treatment (narrow) @@ -33863,6 +34518,7 @@ + The treatment involving use of styryl quinoline for mutagenesis process. EO:0007569 styryl quinoline treatment (narrow) @@ -33884,6 +34540,7 @@ + The treatment involving use of sulfur mustard for mutagenesis process. EO:0007570 sulfur mustard treatment (narrow) @@ -33906,6 +34563,7 @@ + The treatment involving use of triaziquone for mutagenesis process. EO:0007571 triaziquone treatment (narrow) @@ -33951,6 +34609,7 @@ + The treatment involving use of urethane for mutagenesis process. EO:0007573 urethane treatment (narrow) @@ -33972,6 +34631,7 @@ + The treatment involving use of vinyl carbamate for mutagenesis process. EO:0007574 vinyl carbamate treatment (narrow) @@ -34236,6 +34896,7 @@ + An exposure involving exposure of plant to molecular or ionic forms of hydrogen to study various types of responses. EO:0007629 hydrogen treatment (narrow) @@ -34335,7 +34996,6 @@ An herbicide exposure (PECO:0007183) involving the use of an imidazolinone herbicide. TO:moorel - web:http://corn.agronomy.wisc.edu/AAdvice/1994/A001.html @@ -34360,14 +35020,30 @@ + + + + + + + + + + + + + + + + - +