Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Implementation of era_tables #93

Open
annabel-uzl opened this issue Aug 12, 2024 · 0 comments
Open

Implementation of era_tables #93

annabel-uzl opened this issue Aug 12, 2024 · 0 comments

Comments

@annabel-uzl
Copy link

I looked into the implementation of the era tables and used the scripts Ohdsi defined online: https://ohdsi.github.io/CommonDataModel/sqlScripts.html#Era_Tables
However, when I ran the etl (e.g. riab --run-etl ./omop-cdm --table condition_era), I got the following error:

error: argument -t/--table: invalid choice: 'condition_era' (choose from 'metadata', 'cdm_source', 'vocabulary', 'location', 'care_site', 'provider', 'person', 'observation_period', 'visit_occurrence', 'visit_detail', 'condition_occurrence', 'drug_exposure', 'procedure_occurrence', 'device_exposure', 'measurement', 'observation', 'death', 'note', 'note_nlp', 'specimen', 'fact_relationship', 'payer_plan_period', 'cost', 'episode', 'episode_event')

It seems like the _era tables are not implemented in the etl? Can they be added?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant