deprecate parameter setting functions

[cjyetman]

Based on discussion in #9, and our currently preferred strategy for loading parameters in whichever way is most appropriate for a given workflow (as has been done in the modern workflow.pacta), we should deprecate the three parameter setting functions in this repo:

• set_web_parameters()
• set_portfolio_parameters()
• set_project_parameters()

This should probably not be done before workflow.transition.monitor has been fully deprecated, since it currently depends on these functions.