From d47e6b70c5c1aa387a7fae6d77991f0083907e3f Mon Sep 17 00:00:00 2001
From: Jackson Burns <jwburns@mit.edu>
Date: Fri, 7 Jun 2024 09:16:27 -0400
Subject: [PATCH 1/2] github actions CI maintainence

 - copy the download logic from RMG-Py (https://github.com/ReactionMechanismGenerator/RMG-Py/pull/2669) that updates the version of download-artifact
 - increment setup-miniconda
---
 .github/workflows/CI.yml | 25 +++++++++++++------------
 1 file changed, 13 insertions(+), 12 deletions(-)

diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml
index 4fe555db31..0cf6df9a8a 100644
--- a/.github/workflows/CI.yml
+++ b/.github/workflows/CI.yml
@@ -64,7 +64,7 @@ jobs:
 
       # configures the mamba environment manager and builds the environment
       - name: Setup Mambaforge Python 3.7
-        uses: conda-incubator/setup-miniconda@v2
+        uses: conda-incubator/setup-miniconda@v3
         with:
           environment-file: RMG-Py/environment.yml
           miniforge-variant: Mambaforge
@@ -149,23 +149,24 @@ jobs:
         run: mkdir stable_regression_results
 
       # Retrieve Stable Results for reference
-      # Will need to use this -> https://github.com/dawidd6/action-download-artifact
+      - name : Find ID of Reference Results
+        env:
+          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        run: |
+          run_id=$(gh run list -R ReactionMechanismGenerator/RMG-Py --workflow="Continuous Integration" --branch main --limit 1 --json databaseId --jq '.[0].databaseId')
+          echo "CI_RUN_ID=$run_id" >> $GITHUB_ENV
+
       - name: Retrieve Stable Regression Results
         if: ${{ env.REFERENCE_JOB == 'false' }}
-        uses: dsnopek/action-download-artifact@91dda23aa09c68860977dd0ed11d93c0ed3795e7 # see https://github.com/ReactionMechanismGenerator/RMG-Py/pull/2459#issuecomment-1582850815
+        uses: actions/download-artifact@v4
         with:
         # this will search for the last successful execution of CI on main and download
         # the stable regression results
-          workflow: CI.yml
-          workflow_conclusion: success
-          repo: ReactionMechanismGenerator/RMG-Py
-          branch: main
+          run-id: ${{ env.CI_RUN_ID }}
+          repository: ReactionMechanismGenerator/RMG-Py
+          github-token:  ${{ secrets.GH_PAT }}
           name: stable_regression_results
-          path: RMG-Py/stable_regression_results
-          search_artifacts: true  # retrieves the last run result, either scheduled daily or on push to main
-          ensure_latest: true     # ensures that the latest run is retrieved
-          # should result in a set of folders inside stable_regression_results
-          # each of which has the stable result for that example/test
+          path: stable_regression_results
 
       # Regression Testing - Actual Comparisons
       - name: Regression Tests - Compare to Baseline

From a85e44c4963f7bf69eaba0c3a1a86a1769fc9334 Mon Sep 17 00:00:00 2001
From: Jackson Burns <jwburns@mit.edu>
Date: Fri, 7 Jun 2024 09:28:55 -0400
Subject: [PATCH 2/2] set a default value for the conda_token if the secret is
 missing (forks)

---
 .github/workflows/conda_build.yml | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/conda_build.yml b/.github/workflows/conda_build.yml
index d528ee94c2..c1d447c38b 100644
--- a/.github/workflows/conda_build.yml
+++ b/.github/workflows/conda_build.yml
@@ -27,8 +27,10 @@ jobs:
         run: |
           conda config --set anaconda_upload yes
       - name: Build Binary
-        env: 
-          CONDA_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
         run: |
+          # set a default value to the conda_token if needed (like from forks)
+          : "${CONDA_TOKEN:=${{ secrets.ANACONDA_TOKEN }}}"
+          : "${CONDA_TOKEN:=default_value}"
+          echo "CONDA_TOKEN=$CONDA_TOKEN" >> $GITHUB_ENV
           conda config --add channels conda-forge
           conda-build --token $CONDA_TOKEN --user rmg .conda